RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 GRID2O43424 1007 aa13.7□□□□□ -0.22
SPCS3-204ENST00000513139 CBFA2T2O43439 604 aa13.7□□□□□ -0.22
SPCS3-204ENST00000513139 NUAK1O60285 661 aa13.7□□□□□ -0.22
SPCS3-204ENST00000513139 MAFKO60675 156 aa13.7□□□□□ -0.22
SPCS3-204ENST00000513139 VIPP01282 170 aa13.7□□□□□ -0.22
SPCS3-204ENST00000513139 TYRP1P17643 537 aa13.7□□□□□ -0.22
SPCS3-204ENST00000513139 MMP13P45452 471 aa13.7□□□□□ -0.22
SPCS3-204ENST00000513139 CAPZBP47756 277 aa13.7□□□□□ -0.22
SPCS3-204ENST00000513139 CDH6P55285 790 aa13.7□□□□□ -0.22
SPCS3-204ENST00000513139 MAXP61244 160 aa13.7□□□□□ -0.22
SPCS3-204ENST00000513139 PRR30Q53SZ7 412 aaPredicted RBP13.7□□□□□ -0.22
SPCS3-204ENST00000513139 PPP6R3Q5H9R7 873 aaPredicted RBP13.7□□□□□ -0.22
SPCS3-204ENST00000513139 MARC1Q5VT66 337 aa13.7□□□□□ -0.22
SPCS3-204ENST00000513139 CACHD1Q5VU97 1274 aa13.7□□□□□ -0.22
SPCS3-204ENST00000513139 SARM1Q6SZW1 724 aa13.7□□□□□ -0.22
SPCS3-204ENST00000513139 TP53INP2Q8IXH6 220 aa13.7□□□□□ -0.22
SPCS3-204ENST00000513139 RHOT1Q8IXI2 618 aa13.7□□□□□ -0.22
SPCS3-204ENST00000513139 TTC13Q8NBP0 860 aa13.7□□□□□ -0.22
SPCS3-204ENST00000513139 NSMCE1Q8WV22 266 aa13.7□□□□□ -0.22
SPCS3-204ENST00000513139 ZDHHC12Q96GR4 267 aa13.7□□□□□ -0.22
SPCS3-204ENST00000513139 C5orf34Q96MH7 638 aa13.7□□□□□ -0.22
SPCS3-204ENST00000513139 CWC15Q9P013 229 aaKnown RBP13.7□□□□□ -0.22
SPCS3-204ENST00000513139 SEMA5BQ9P283 1151 aa13.7□□□□□ -0.22
SPCS3-204ENST00000513139 G3BP2Q9UN86 482 aaKnown RBP13.7□□□□□ -0.22
SPCS3-204ENST00000513139 PDZD2O15018 2839 aa13.69□□□□□ -0.22
SPCS3-204ENST00000513139 ZGRF1Q86YA3 2104 aa13.69□□□□□ -0.22
SPCS3-204ENST00000513139 SSU72P8A0A1W2PR75 194 aa13.69□□□□□ -0.22
SPCS3-204ENST00000513139 ARGFXA6NJG6 315 aa13.69□□□□□ -0.22
SPCS3-204ENST00000513139 GPR89AB7ZAQ6 455 aa13.69□□□□□ -0.22
SPCS3-204ENST00000513139 TIAF1O95411 115 aa13.69□□□□□ -0.22
SPCS3-204ENST00000513139 CBX6O95503 412 aa13.69□□□□□ -0.22
SPCS3-204ENST00000513139 GPR89BP0CG08 455 aa13.69□□□□□ -0.22
SPCS3-204ENST00000513139 PSMA2P25787 234 aa13.69□□□□□ -0.22
SPCS3-204ENST00000513139 SLC19A1P41440 591 aa13.69□□□□□ -0.22
SPCS3-204ENST00000513139 EMP3P54852 163 aa13.69□□□□□ -0.22
SPCS3-204ENST00000513139 CHAF1BQ13112 559 aa13.69□□□□□ -0.22
SPCS3-204ENST00000513139 ZRANB3Q5FWF4 1079 aa13.69□□□□□ -0.22
SPCS3-204ENST00000513139 HENMT1Q5T8I9 393 aaKnown RBP13.69□□□□□ -0.22
SPCS3-204ENST00000513139 SLC6A19Q695T7 634 aa13.69□□□□□ -0.22
SPCS3-204ENST00000513139 PWWP2BQ6NUJ5 590 aa13.69□□□□□ -0.22
SPCS3-204ENST00000513139 CYP4V2Q6ZWL3 525 aaPredicted RBP13.69□□□□□ -0.22
SPCS3-204ENST00000513139 TRIM48Q8IWZ4 208 aa13.69□□□□□ -0.22
SPCS3-204ENST00000513139 RBM12BQ8IXT5 1001 aaKnown RBP13.69□□□□□ -0.22
SPCS3-204ENST00000513139 SRRM1Q8IYB3 904 aaKnown RBP13.69□□□□□ -0.22
SPCS3-204ENST00000513139 MCOLN2Q8IZK6 566 aa13.69□□□□□ -0.22
SPCS3-204ENST00000513139 ARFGAP1Q8N6T3 406 aa13.69□□□□□ -0.22
SPCS3-204ENST00000513139 CPLX3Q8WVH0 158 aa13.69□□□□□ -0.22
SPCS3-204ENST00000513139 WDR24Q96S15 920 aa13.69□□□□□ -0.22
SPCS3-204ENST00000513139 LYSMD1Q96S90 227 aa13.69□□□□□ -0.22
SPCS3-204ENST00000513139 PEBP4Q96S96 227 aa13.69□□□□□ -0.22
SPCS3-204ENST00000513139 ZWILCHQ9H900 591 aa13.69□□□□□ -0.22
SPCS3-204ENST00000513139 ZNF624Q9P2J8 865 aaPredicted RBP13.69□□□□□ -0.22
SPCS3-204ENST00000513139 PCSK1NQ9UHG2 260 aa13.69□□□□□ -0.22
SPCS3-204ENST00000513139 RARRES3Q9UL19 164 aa13.69□□□□□ -0.22
SPCS3-204ENST00000513139 FARSAQ9Y285 508 aaKnown RBP13.69□□□□□ -0.22
SPCS3-204ENST00000513139 ADGRG1Q9Y653 693 aa13.69□□□□□ -0.22
SPCS3-204ENST00000513139 ITPR3Q14573 2671 aa13.68□□□□□ -0.22
SPCS3-204ENST00000513139 RGSL1A5PLK6 1076 aa13.68□□□□□ -0.22
SPCS3-204ENST00000513139 KIF1CO43896 1103 aaKnown RBP13.68□□□□□ -0.22
SPCS3-204ENST00000513139 PRPSAP2O60256 369 aa13.68□□□□□ -0.22
SPCS3-204ENST00000513139 RNF8O76064 485 aa13.68□□□□□ -0.22
SPCS3-204ENST00000513139 TPM3P06753 285 aa13.68□□□□□ -0.22
SPCS3-204ENST00000513139 CES1P23141 567 aa13.68□□□□□ -0.22
SPCS3-204ENST00000513139 ZNF75DP51815 510 aa13.68□□□□□ -0.22
SPCS3-204ENST00000513139 EPHB1P54762 984 aa13.68□□□□□ -0.22
SPCS3-204ENST00000513139 RPS18P62269 152 aaKnown RBP13.68□□□□□ -0.22
SPCS3-204ENST00000513139 PDE1BQ01064 536 aa13.68□□□□□ -0.22
SPCS3-204ENST00000513139 TUBB3Q13509 450 aa13.68□□□□□ -0.22
SPCS3-204ENST00000513139 IL10RAQ13651 578 aa13.68□□□□□ -0.22
SPCS3-204ENST00000513139 ACAD10Q6JQN1 1059 aa13.68□□□□□ -0.22
SPCS3-204ENST00000513139 ZNF517Q6ZMY9 492 aaPredicted RBP13.68□□□□□ -0.22
SPCS3-204ENST00000513139 VSTM4Q8IW00 320 aa13.68□□□□□ -0.22
SPCS3-204ENST00000513139 RBMXL3Q8N7X1 1067 aaKnown RBP13.68□□□□□ -0.22
SPCS3-204ENST00000513139 UBXN4Q92575 508 aa13.68□□□□□ -0.22
SPCS3-204ENST00000513139 MOCOSQ96EN8 888 aa13.68□□□□□ -0.22
SPCS3-204ENST00000513139 SLC41A2Q96JW4 573 aa13.68□□□□□ -0.22
SPCS3-204ENST00000513139 AKIRIN1Q9H9L7 192 aaPredicted RBP13.68□□□□□ -0.22
SPCS3-204ENST00000513139 SLC40A1Q9NP59 571 aa13.68□□□□□ -0.22
SPCS3-204ENST00000513139 KLC4Q9NSK0 619 aa13.68□□□□□ -0.22
SPCS3-204ENST00000513139 POT1Q9NUX5 634 aa13.68□□□□□ -0.22
SPCS3-204ENST00000513139 SEPT11Q9NVA2 429 aaKnown RBP13.68□□□□□ -0.22
SPCS3-204ENST00000513139 PARVAQ9NVD7 372 aa13.68□□□□□ -0.22
SPCS3-204ENST00000513139 SCHIP1Q9P0W5 487 aaPredicted RBP13.68□□□□□ -0.22
SPCS3-204ENST00000513139 MAP10Q9P2G4 905 aa13.68□□□□□ -0.22
SPCS3-204ENST00000513139 SVILO95425 2214 aa13.67□□□□□ -0.22
SPCS3-204ENST00000513139 FADS2P1A8MWK0 482 aa13.67□□□□□ -0.22
SPCS3-204ENST00000513139 H3BRJ5 948 aa13.67□□□□□ -0.22
SPCS3-204ENST00000513139 CLDN7O95471 211 aa13.67□□□□□ -0.22
SPCS3-204ENST00000513139 MIPP30301 263 aa13.67□□□□□ -0.22
SPCS3-204ENST00000513139 PTGIRP43119 386 aa13.67□□□□□ -0.22
SPCS3-204ENST00000513139 SPINT3P49223 89 aa13.67□□□□□ -0.22
SPCS3-204ENST00000513139 RPL26P61254 145 aaKnown RBP13.67□□□□□ -0.22
SPCS3-204ENST00000513139 ACY1Q03154 408 aa13.67□□□□□ -0.22
SPCS3-204ENST00000513139 MAMLD1Q13495 774 aa13.67□□□□□ -0.22
SPCS3-204ENST00000513139 NR6A1Q15406 480 aa13.67□□□□□ -0.22
SPCS3-204ENST00000513139 IZUMO3Q5VZ72 239 aa13.67□□□□□ -0.22
SPCS3-204ENST00000513139 ALG1LQ6GMV1 187 aa13.67□□□□□ -0.22
SPCS3-204ENST00000513139 PPP1R2P3Q6NXS1 205 aa13.67□□□□□ -0.22
SPCS3-204ENST00000513139 FAM199XQ6PEV8 388 aaPredicted RBP13.67□□□□□ -0.22
SPCS3-204ENST00000513139 TMCO3Q6UWJ1 677 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms