RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 AP1S3Q96PC3 154 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 KRT12Q99456 494 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZCWPW1Q9H0M4 648 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 TRIT1Q9H3H1 467 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 OPA3Q9H6K4 179 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 CAAP1Q9H8G2 361 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 NPHS2Q9NP85 383 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ATAD3AQ9NVI7 634 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 COMMD9Q9P000 198 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 MARK1Q9P0L2 795 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 EBF1Q9UH73 591 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 GGT7Q9UJ14 662 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF180Q9UJW8 692 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 GGA1Q9UJY5 639 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 USP18Q9UMW8 372 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 LRCH1Q9Y2L9 728 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF281Q9Y2X9 895 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 HBS1LQ9Y450 684 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 NOX1Q9Y5S8 564 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ABCA7Q8IZY2 2146 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 DSCAMO60469 2012 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 USP17L12C9JPN9 530 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 USP17L21D6R901 530 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ACKR2O00590 384 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 KCNK3O14649 394 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 KMOO15229 486 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 NCAM2O15394 837 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 NDUFB5O43674 189 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 CALUO43852 315 aaPredicted RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 AHCYL1O43865 530 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 PCDHGA12O60330 932 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 E2F6O75461 281 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 IL18BPO95998 194 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ASS1P00966 412 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 THP07101 528 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 CCDC159P0C7I6 412 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 UQCRBP14927 111 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 NQO1P15559 274 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 TKTP29401 623 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 HPDP32754 393 aaPredicted RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 MNDAP41218 407 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 VAMP7P51809 220 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 COPAP53621 1224 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 DEFA1P59665 94 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 DEFA3P59666 94 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 RALGDSQ12967 914 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 PAK2Q13177 524 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 STX5Q13190 355 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 NFE2L1Q14494 772 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ACAP1Q15027 740 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 GRIK4Q16099 956 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ESCO2Q56NI9 601 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 C2orf27AQ580R0 203 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 TTC38Q5R3I4 469 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 HECTD3Q5T447 861 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ANGEL2Q5VTE6 544 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 IL23RQ5VWK5 629 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 NXNL2Q5VZ03 156 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ERAP2Q6P179 960 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 KCNT2Q6UVM3 1135 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ANGPTL8Q6UXH0 198 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 NSMFQ6X4W1 530 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 OTUD6AQ7L8S5 288 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 NBPF5PQ86XG9 351 aaPredicted RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 STX12Q86Y82 276 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 LURAP1LQ8IV03 231 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ADGRF4Q8IZF3 695 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 EID3Q8N140 333 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 EFCAB3Q8N7B9 438 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 CEP70Q8NHQ1 597 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 PCDH19Q8TAB3 1148 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAM45AQ8TCE6 357 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC35F5Q8WV83 523 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC44A1Q8WWI5 657 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF75CPQ92670 426 aaPredicted RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 INPP5DQ92835 1189 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 RIT1Q92963 219 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAM149B1Q96BN6 582 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 PGAP3Q96FM1 320 aaPredicted RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 MYO19Q96H55 970 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 CLPTM1LQ96KA5 538 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 RAD9AQ99638 391 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 IL12RB2Q99665 862 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 CTRCQ99895 268 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 AGPAT1Q99943 283 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 AMNQ9BXJ7 453 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 RACGAP1Q9H0H5 632 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 UNC93B1Q9H1C4 597 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 HIPK2Q9H2X6 1198 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 NRBP2Q9NSY0 501 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ELOVL2Q9NXB9 296 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ADAMTS1Q9UHI8 967 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 KCNG2Q9UJ96 466 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 LSM7Q9UK45 103 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 RAD54BQ9Y620 910 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 C2CD3Q4AC94 2353 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ABHD14A-ACY1A0A1B0GW23 586 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms