RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 RAVER1Q8IY67 606 aaKnown RBP8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 CCDC89Q8N998 374 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 GPR156Q8NFN8 814 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 OR13J1Q8NGT2 312 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 WDR36Q8NI36 951 aaKnown RBP8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 COX14Q96I36 57 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 DNAJC1Q96KC8 554 aaKnown RBP8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 ZNF578Q96N58 590 aaPredicted RBP8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 SRPK1Q96SB4 655 aaKnown RBP8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 FSD1LQ9BXM9 530 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 LRRC40Q9H9A6 602 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 SPATS2LQ9NUQ6 558 aaKnown RBP8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 GRHL1Q9NZI5 618 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 RABGEF1Q9UJ41 708 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 SATB2Q9UPW6 733 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 SLC17A4Q9Y2C5 497 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 AAR2Q9Y312 384 aaKnown RBP8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 PRKAB1Q9Y478 270 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 PLEKHM1Q9Y4G2 1056 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 RNF215Q9Y6U7 377 aa8.65□□□□□ -1.02
PDLIM5-213ENST00000509357 APC2O95996 2303 aa8.65□□□□□ -1.03
PDLIM5-213ENST00000509357 ACACAQ13085 2346 aa8.65□□□□□ -1.03
PDLIM5-213ENST00000509357 PTPRBP23467 1997 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 CELSR3Q9NYQ7 3312 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 ZFHX4Q86UP3 3567 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 GOLGA8MH3BSY2 632 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 DNALI1O14645 258 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 CASC3O15234 703 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 SGTAO43765 313 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 NUDT21O43809 227 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 ZNF500O60304 480 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 NOBOXO60393 691 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 UGT1A9O60656 530 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 SNX2O60749 519 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 TNFSF15O95150 251 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 SLC25A14O95258 325 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 ECEL1O95672 775 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 ACP5P13686 325 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 UGT1A6P19224 532 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 TPSB2P20231 275 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 UGT1A1P22309 533 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 UGT1A4P22310 534 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 MGAT1P26572 445 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 UGT1A3P35503 534 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 UGT1A5P35504 534 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 HMGCLP35914 325 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 EIF2S3P41091 472 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 INHBCP55103 352 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 MAZP56270 477 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 PCBP4P57723 403 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 TMPRSS15P98073 1019 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 LRP8Q14114 963 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 HLTFQ14527 1009 aaKnown RBP eCLIP8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 PRPSAP1Q14558 356 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 SEMA3AQ14563 771 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 TPSAB1Q15661 275 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 MAP9Q49MG5 647 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 ATP13A5Q4VNC0 1218 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 PYCR3Q53H96 274 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 FNBP1LQ5T0N5 605 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 CES3Q6UWW8 571 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 ZDHHC24Q6UX98 284 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 CHST15Q7LFX5 561 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 GSTA5Q7RTV2 222 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 GLT6D1Q7Z4J2 308 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 NRROSQ86YC3 692 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 FBXO39Q8N4B4 442 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 ARL14Q8N4G2 192 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 OR4K2Q8NGD2 314 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 GDAP1Q8TB36 358 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 LRRC45Q96CN5 670 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 TMEM74Q96NL1 305 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 SERPINB12Q96P63 405 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 NAP1L3Q99457 506 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 ZSCAN5AQ9BUG6 496 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 FOXP3Q9BZS1 431 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 OR2AG1Q9H205 316 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 UGT1A7Q9HAW7 530 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 UGT1A10Q9HAW8 530 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 UGT1A8Q9HAW9 530 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 IL26Q9NPH9 171 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 EIF2B3Q9NR50 452 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 THSD1Q9NS62 852 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 HOMER3Q9NSC5 361 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 SYBUQ9NX95 663 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 AKAP7Q9P0M2 348 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 VPS18Q9P253 973 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 NFKBIL1Q9UBC1 381 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 FKBPLQ9UIM3 349 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 APPL1Q9UKG1 709 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 ATXN7L1Q9ULK2 861 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 ENTPD2Q9Y5L3 495 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 ARHGEF17Q96PE2 2063 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 PIKFYVEQ9Y2I7 2098 aa8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 URB1O60287 2271 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-213ENST00000509357 PKD1L2Q7Z442 2459 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 A0A087WV48 116 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 CCDC187A0A096LP49 1063 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 D6RAR5 112 aa8.63□□□□□ -1.03
PDLIM5-213ENST00000509357 CCDC188H7C350 402 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms