RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 TRABDQ9H4I3 376 aa14.61□□□□□ -0.07
UBE2D3-228ENST00000508974 STN1Q9H668 368 aaKnown RBP14.61□□□□□ -0.07
UBE2D3-228ENST00000508974 UGT1A7Q9HAW7 530 aa14.61□□□□□ -0.07
UBE2D3-228ENST00000508974 UGT1A10Q9HAW8 530 aa14.61□□□□□ -0.07
UBE2D3-228ENST00000508974 UGT1A8Q9HAW9 530 aa14.61□□□□□ -0.07
UBE2D3-228ENST00000508974 IL26Q9NPH9 171 aa14.61□□□□□ -0.07
UBE2D3-228ENST00000508974 FOXJ2Q9P0K8 574 aa14.61□□□□□ -0.07
UBE2D3-228ENST00000508974 AKAP7Q9P0M2 348 aaPredicted RBP14.61□□□□□ -0.07
UBE2D3-228ENST00000508974 IMPACTQ9P2X3 320 aa14.61□□□□□ -0.07
UBE2D3-228ENST00000508974 PKP3Q9Y446 797 aa14.61□□□□□ -0.07
UBE2D3-228ENST00000508974 ARL5AQ9Y689 179 aa14.61□□□□□ -0.07
UBE2D3-228ENST00000508974 MGAQ8IWI9 3026 aa14.61□□□□□ -0.07
UBE2D3-228ENST00000508974 SMG1Q96Q15 3661 aaKnown RBP14.61□□□□□ -0.07
UBE2D3-228ENST00000508974 GLYATL1P3A0A0U1RQE8 302 aa14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 A6NCN8 305 aa14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 EIF4E1BA6NMX2 242 aaKnown RBP14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 CHUKO15111 745 aa14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 KMOO15229 486 aa14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 DUX1O43812 170 aa14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 ANXA9O76027 345 aa14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 EPOP01588 193 aa14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 ZNF7P17097 686 aaPredicted RBP14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 RPL10P27635 214 aaKnown RBP14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 CA5AP35218 305 aa14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 PTPN7P35236 360 aa14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 MLLT3P42568 568 aaPredicted RBP14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 LIMK2P53671 638 aa14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 DRG2P55039 364 aaKnown RBP14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 SRSF6Q13247 344 aaKnown RBP14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 GTF2H3Q13889 308 aa14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 SPARCL1Q14515 664 aa14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 SLC9B2Q86UD5 537 aa14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 ZFAND4Q86XD8 727 aa14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 ZNF547Q8IVP9 402 aa14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 TAB3Q8N5C8 712 aaPredicted RBP14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 UBL4BQ8N7F7 174 aa14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 OR10G6Q8NH81 332 aa14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 NAT14Q8WUY8 206 aa14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 NCSTNQ92542 709 aa14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 PMEPA1Q969W9 287 aa14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 TTC25Q96NG3 672 aa14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 VPS35Q96QK1 796 aa14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 UBL7Q96S82 380 aaPredicted RBP14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 TBC1D10AQ9BXI6 508 aa14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 HACD3Q9P035 362 aa14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 IL17CQ9P0M4 197 aa14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 SCHIP1Q9P0W5 487 aaPredicted RBP14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 KLHL3Q9UH77 587 aa14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 EFR3BQ9Y2G0 817 aa14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 PCDHGA7Q9Y5G6 932 aa14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 CAPN6Q9Y6Q1 641 aa14.6□□□□□ -0.07
UBE2D3-228ENST00000508974 C9orf172C9J069 976 aa14.59□□□□□ -0.07
UBE2D3-228ENST00000508974 STX7O15400 261 aaKnown RBP14.59□□□□□ -0.07
UBE2D3-228ENST00000508974 DDX3YO15523 660 aaKnown RBP14.59□□□□□ -0.07
UBE2D3-228ENST00000508974 VEGFDO43915 354 aa14.59□□□□□ -0.07
UBE2D3-228ENST00000508974 PRB1P04280 392 aa14.59□□□□□ -0.07
UBE2D3-228ENST00000508974 SLC2A4P14672 509 aa14.59□□□□□ -0.07
UBE2D3-228ENST00000508974 PBLDP30039 288 aaPredicted RBP14.59□□□□□ -0.07
UBE2D3-228ENST00000508974 UCNP55089 124 aa14.59□□□□□ -0.07
UBE2D3-228ENST00000508974 GPLD1P80108 840 aa14.59□□□□□ -0.07
UBE2D3-228ENST00000508974 TMEM115Q12893 351 aaPredicted RBP14.59□□□□□ -0.07
UBE2D3-228ENST00000508974 PRPSAP1Q14558 356 aa14.59□□□□□ -0.07
UBE2D3-228ENST00000508974 FAM129CQ86XR2 697 aa14.59□□□□□ -0.07
UBE2D3-228ENST00000508974 TRIM48Q8IWZ4 208 aa14.59□□□□□ -0.07
UBE2D3-228ENST00000508974 SYCE1Q8N0S2 351 aa14.59□□□□□ -0.07
UBE2D3-228ENST00000508974 OR4D9Q8NGE8 314 aa14.59□□□□□ -0.07
UBE2D3-228ENST00000508974 JPH3Q8WXH2 748 aaPredicted RBP14.59□□□□□ -0.07
UBE2D3-228ENST00000508974 TMEM159Q96B96 161 aa14.59□□□□□ -0.07
UBE2D3-228ENST00000508974 SPATA13Q96N96 652 aa14.59□□□□□ -0.07
UBE2D3-228ENST00000508974 SARS2Q9NP81 518 aaKnown RBP14.59□□□□□ -0.07
UBE2D3-228ENST00000508974 CPNE7Q9UBL6 633 aa14.59□□□□□ -0.07
UBE2D3-228ENST00000508974 R3HDM2Q9Y2K5 976 aaKnown RBP14.59□□□□□ -0.07
UBE2D3-228ENST00000508974 KCTD3Q9Y597 815 aa14.59□□□□□ -0.07
UBE2D3-228ENST00000508974 SDK2Q58EX2 2172 aa14.58□□□□□ -0.07
UBE2D3-228ENST00000508974 KIR2DS5A0A0G2JLQ3 304 aa14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 A0A0G2JNG1 304 aa14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 TCRBV7S2A1N4TA0A589 114 aa14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 GOLGA6L9A6NEM1 432 aa14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 OR2AG2A6NM03 316 aa14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 GOLGA6L6A8MZA4 724 aa14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 GPR89AB7ZAQ6 455 aa14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 KIR2DS3K7RE56 304 aa14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 GAPDHSO14556 408 aaPredicted RBP14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 GPR89BP0CG08 455 aa14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 THRAP10827 490 aa14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 FGF3P11487 239 aaPredicted RBP14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 AKT1P31749 480 aa14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 CSTF2P33240 577 aaKnown RBP eCLIP14.58□□□□□ -0.083e-8■■■■□ 24.2
UBE2D3-228ENST00000508974 TMPRSS15P98073 1019 aa14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 VAC14Q08AM6 782 aa14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 COL9A2Q14055 689 aaPredicted RBP14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 KIR2DS5Q14953 304 aa14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 GPRC6AQ5T6X5 926 aa14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 TMEM71Q6P5X7 295 aa14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 CCDC81Q6ZN84 652 aa14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 ARHGEF18Q6ZSZ5 1173 aa14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 MICALCLQ6ZW33 695 aa14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 DET1Q7L5Y6 550 aa14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 VASH2Q86V25 355 aa14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 TXLNBQ8N3L3 684 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms