RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 AAGABQ6PD74 315 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 DENND5BQ6ZUT9 1274 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 MARK2Q7KZI7 788 aaKnown RBP3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 YTHDF3Q7Z739 585 aaKnown RBP3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 KIAA1328Q86T90 577 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 TLK2Q86UE8 772 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 VASH2Q86V25 355 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 CNTN4Q8IWV2 1026 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 ARHGAP12Q8IWW6 846 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 TCAIMQ8N3R3 496 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 ZCCHC7Q8N3Z6 543 aaKnown RBP3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 RASGEF1CQ8N431 466 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 RBM15BQ8NDT2 890 aaKnown RBP3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 AGBL3Q8NEM8 1001 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 OR7G3Q8NG95 312 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 LILRB4Q8NHJ6 448 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 GANCQ8TET4 914 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 ABHD5Q8WTS1 349 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 DNAJA4Q8WW22 397 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 KAT2BQ92831 832 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 GTF3C6Q969F1 213 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 FKBP10Q96AY3 582 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 INTS12Q96CB8 462 aaKnown RBP3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 TMCO6Q96DC7 493 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 DTNBP1Q96EV8 351 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 C5orf30Q96GV9 206 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 ZNF668Q96K58 619 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 USP28Q96RU2 1077 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 FIZ1Q96SL8 496 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 VKORC1Q9BQB6 163 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 BCL7BQ9BQE9 202 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 MMTAG2Q9BU76 263 aaKnown RBP3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 TBC1D10AQ9BXI6 508 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 RTN4RQ9BZR6 473 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 TMEM206Q9H813 350 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 GPN1Q9HCN4 374 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 MED4Q9NPJ6 270 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 SPATS2LQ9NUQ6 558 aaKnown RBP3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 TBC1D13Q9NVG8 400 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 DNAJC17Q9NVM6 304 aaKnown RBP3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 TMEM161AQ9NX61 479 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 EHD3Q9NZN3 535 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 SH3BP4Q9P0V3 963 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 SPASTQ9UBP0 616 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 DDX25Q9UHL0 483 aaKnown RBP3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 SLCO3A1Q9UIG8 710 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 ATPIF1Q9UII2 106 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 DBNLQ9UJU6 430 aaKnown RBP3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 KCND3Q9UK17 655 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 SHOC2Q9UQ13 582 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 DRG1Q9Y295 367 aaKnown RBP3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 PTRH2Q9Y3E5 179 aaKnown RBP3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 ACEP12821 1306 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 MYO3BQ8WXR4 1341 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 KDRP35968 1356 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 KANK1Q14678 1352 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 TNIKQ9UKE5 1360 aa3.61□□□□□ -1.83
HMGB3P15-201ENST00000507326 MYO15BQ96JP2 1530 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 TEX13CA0A0J9YWL9 993 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 LOC100506127A0A0U1RQW1 187 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 IQANK1A0A1B0GTG1 560 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 OR6C74A6NCV1 312 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 ZSCAN5CA6NGD5 496 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 SH2D7A6NKC9 451 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 MEIS2O14770 477 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 EIF3DO15371 548 aaKnown RBP eCLIP3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 HS6ST1O60243 411 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 PSMD10O75832 226 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 PDE9AO76083 593 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 TOMM70O94826 608 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 MFN2O95140 757 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 RASAL1O95294 804 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 CH25HO95992 272 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 APOA1P02647 267 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 ZFYP08048 801 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 FGF4P08620 206 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 CYP2D6P10635 497 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 PRKAR1AP10644 381 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 ZFXP17010 805 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 TNNI3P19429 210 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 HNRNPA2B1P22626 353 aaKnown RBP3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 PRDX5P30044 214 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 OTX2P32243 289 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 TTKP33981 857 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 CAPGP40121 348 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 PRKCIP41743 596 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 ARHGAP25P42331 645 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 CCR3P51677 355 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 NME5P56597 212 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 WNT3P56703 355 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 ACTR3P61158 418 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 RPS8P62241 208 aaKnown RBP3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 TRA2BP62995 288 aaKnown RBP3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 RPP38P78345 283 aaKnown RBP3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 IRX1P78414 480 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 BASP1P80723 227 aaKnown RBP3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 DR1Q01658 176 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 TFAP4Q01664 338 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms