RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 TPRG1Q6ZUI0 275 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 FASTKD5Q7L8L6 764 aaKnown RBP2.79□□□□□ -1.96
GYPB-207ENST00000506679 SZRD1Q7Z422 152 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 DSG4Q86SJ6 1040 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 EPHX4Q8IUS5 362 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 CEP97Q8IW35 865 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 MAP7D3Q8IWC1 876 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 MCEMP1Q8IX19 187 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 TEX11Q8IYF3 940 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 MUC20Q8N307 709 aaPredicted RBP2.79□□□□□ -1.96
GYPB-207ENST00000506679 EMC1Q8N766 993 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 IL17RCQ8NAC3 791 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 TMEM255BQ8WV15 326 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 LRRC59Q96AG4 307 aaKnown RBP2.79□□□□□ -1.96
GYPB-207ENST00000506679 FEM1CQ96JP0 617 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 LMLNQ96KR4 655 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 TIGD1Q96MW7 591 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 SLC22A12Q96S37 553 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 FKRPQ9H9S5 495 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 WSB2Q9NYS7 404 aaPredicted RBP2.79□□□□□ -1.96
GYPB-207ENST00000506679 KLHL9Q9P2J3 617 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 SUCLA2Q9P2R7 463 aaPredicted RBP2.79□□□□□ -1.96
GYPB-207ENST00000506679 TBC1D29Q9UFV1 150 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 PRAG1Q86YV5 1406 aa2.78□□□□□ -1.96
GYPB-207ENST00000506679 ZNF644Q9H582 1327 aaPredicted RBP2.78□□□□□ -1.96
GYPB-207ENST00000506679 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.78□□□□□ -1.96
GYPB-207ENST00000506679 H3BQ06 376 aaPredicted RBP2.78□□□□□ -1.96
GYPB-207ENST00000506679 EIF3DO15371 548 aaKnown RBP eCLIP2.78□□□□□ -1.96
GYPB-207ENST00000506679 MITFO75030 526 aaPredicted RBP2.78□□□□□ -1.96
GYPB-207ENST00000506679 TMCC2O75069 709 aa2.78□□□□□ -1.96
GYPB-207ENST00000506679 CLTBP09497 229 aa2.78□□□□□ -1.96
GYPB-207ENST00000506679 MARK3P27448 753 aa2.78□□□□□ -1.96
GYPB-207ENST00000506679 GNL1P36915 607 aaPredicted RBP2.78□□□□□ -1.96
GYPB-207ENST00000506679 CTSCP53634 463 aa2.78□□□□□ -1.96
GYPB-207ENST00000506679 MRPS5P82675 430 aaKnown RBP2.78□□□□□ -1.96
GYPB-207ENST00000506679 COG7P83436 770 aa2.78□□□□□ -1.96
GYPB-207ENST00000506679 RPL24P83731 157 aaKnown RBP2.78□□□□□ -1.96
GYPB-207ENST00000506679 MC1RQ01726 317 aa2.78□□□□□ -1.96
GYPB-207ENST00000506679 CXCL9Q07325 125 aa2.78□□□□□ -1.96
GYPB-207ENST00000506679 CCDC96Q2M329 555 aa2.78□□□□□ -1.96
GYPB-207ENST00000506679 ZSCAN23Q3MJ62 389 aa2.78□□□□□ -1.96
GYPB-207ENST00000506679 TMEM35AQ53FP2 167 aa2.78□□□□□ -1.96
GYPB-207ENST00000506679 BRINP3Q76B58 766 aa2.78□□□□□ -1.96
GYPB-207ENST00000506679 ZNF534Q76KX8 674 aa2.78□□□□□ -1.96
GYPB-207ENST00000506679 SLC9B2Q86UD5 537 aa2.78□□□□□ -1.96
GYPB-207ENST00000506679 CCDC190Q86UF4 302 aa2.78□□□□□ -1.96
GYPB-207ENST00000506679 CUZD1Q86UP6 607 aa2.78□□□□□ -1.96
GYPB-207ENST00000506679 NFE4Q86UQ8 179 aa2.78□□□□□ -1.96
GYPB-207ENST00000506679 SCYL3Q8IZE3 742 aa2.78□□□□□ -1.96
GYPB-207ENST00000506679 CIARTQ8N365 385 aaPredicted RBP2.78□□□□□ -1.96
GYPB-207ENST00000506679 UTP15Q8TED0 518 aaKnown RBP2.78□□□□□ -1.96
GYPB-207ENST00000506679 NUDCD1Q96RS6 583 aa2.78□□□□□ -1.96
GYPB-207ENST00000506679 GAD1Q99259 594 aa2.78□□□□□ -1.96
GYPB-207ENST00000506679 LRRC1Q9BTT6 524 aa2.78□□□□□ -1.96
GYPB-207ENST00000506679 FTOQ9C0B1 505 aaKnown RBP eCLIP2.78□□□□□ -1.96
GYPB-207ENST00000506679 ABCF3Q9NUQ8 709 aa2.78□□□□□ -1.96
GYPB-207ENST00000506679 RCC2Q9P258 522 aaKnown RBP2.78□□□□□ -1.96
GYPB-207ENST00000506679 DNAJB4Q9UDY4 337 aa2.78□□□□□ -1.96
GYPB-207ENST00000506679 SEC63Q9UGP8 760 aaKnown RBP2.78□□□□□ -1.96
GYPB-207ENST00000506679 TSPYL4Q9UJ04 414 aa2.78□□□□□ -1.96
GYPB-207ENST00000506679 DBNLQ9UJU6 430 aaKnown RBP2.78□□□□□ -1.96
GYPB-207ENST00000506679 POU2F3Q9UKI9 436 aa2.78□□□□□ -1.96
GYPB-207ENST00000506679 GPR34Q9UPC5 381 aa2.78□□□□□ -1.96
GYPB-207ENST00000506679 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.78□□□□□ -1.96
GYPB-207ENST00000506679 RSF1Q96T23 1441 aaPredicted RBP2.77□□□□□ -1.97
GYPB-207ENST00000506679 A0A087WYN8 130 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 LNP1A1A4G5 178 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 PRSS47A8MTI9 375 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 ANKRD66B4E2M5 251 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 TMEM178BH3BS89 294 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 XPNPEP2O43895 674 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 GPC4O75487 556 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 GJB3O75712 270 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 GH2P01242 217 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 IGLV2-11P01706 119 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 TUBBP07437 444 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 PORP16435 677 aaPredicted RBP2.77□□□□□ -1.97
GYPB-207ENST00000506679 PRLRP16471 622 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 ZNF23P17027 643 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 ALOX12P18054 663 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 AHRP35869 848 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 ARCN1P48444 511 aaKnown RBP2.77□□□□□ -1.97
GYPB-207ENST00000506679 CLNS1AP54105 237 aaKnown RBP2.77□□□□□ -1.97
GYPB-207ENST00000506679 PNLIPRP2P54317 469 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 KRTAP10-9P60411 292 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 PLIN5Q00G26 463 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 EPS8Q12929 822 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 GAGE2BQ13066 116 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 GAGE5Q13069 117 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 GAGE6Q13070 117 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 PRKG2Q13237 762 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 KRTAP24-1Q3LI83 254 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 GAGE2EQ4V326 116 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 ITPRIPL1Q6GPH6 555 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 OR7E24Q6IFN5 339 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.77□□□□□ -1.97
GYPB-207ENST00000506679 GAGE2AQ6NT46 116 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 MEX3BQ6ZN04 569 aaKnown RBP2.77□□□□□ -1.97
GYPB-207ENST00000506679 PLEKHM3Q6ZWE6 761 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 GALNT13Q8IUC8 556 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms