RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 RHDQ02161 417 aa16.5■□□□□ 0.23
PDLIM7-215ENST00000506161 HHEXQ03014 270 aa16.5■□□□□ 0.23
PDLIM7-215ENST00000506161 EIF3IQ13347 325 aaKnown RBP16.5■□□□□ 0.23
PDLIM7-215ENST00000506161 XRCC4Q13426 336 aa16.5■□□□□ 0.23
PDLIM7-215ENST00000506161 SPARCL1Q14515 664 aa16.5■□□□□ 0.23
PDLIM7-215ENST00000506161 ANKRD20A2Q5SQ80 823 aa16.5■□□□□ 0.23
PDLIM7-215ENST00000506161 ANKRD20A1Q5TYW2 823 aa16.5■□□□□ 0.23
PDLIM7-215ENST00000506161 ANKRD20A3Q5VUR7 823 aa16.5■□□□□ 0.23
PDLIM7-215ENST00000506161 KIAA1614Q5VZ46 1190 aa16.5■□□□□ 0.23
PDLIM7-215ENST00000506161 FAM151BQ6UXP7 276 aa16.5■□□□□ 0.23
PDLIM7-215ENST00000506161 RMI1Q9H9A7 625 aa16.5■□□□□ 0.23
PDLIM7-215ENST00000506161 DNAJC16Q9Y2G8 782 aa16.5■□□□□ 0.23
PDLIM7-215ENST00000506161 ARL5AQ9Y689 179 aa16.5■□□□□ 0.23
PDLIM7-215ENST00000506161 PIKFYVEQ9Y2I7 2098 aa16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 CCDC66A2RUB6 948 aa16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 B8ZZF3 427 aa16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 PYCARD-AS1I3L0S3 204 aa16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 KCNN4O15554 427 aa16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 MTSS1O43312 755 aa16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 EPOP01588 193 aa16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 JMJD7P0C870 316 aa16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 F3P13726 295 aa16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 ZNF7P17097 686 aaPredicted RBP16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 SLC19A1P41440 591 aa16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 MLLT3P42568 568 aaPredicted RBP16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 NAP1L1P55209 391 aaKnown RBP16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 RWDD2BP57060 319 aa16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 COPS2P61201 443 aa16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 MPP3Q13368 585 aa16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 SQSTM1Q13501 440 aa16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 SEPT7Q16181 437 aaKnown RBP16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 DENND5AQ6IQ26 1287 aa16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 VASH2Q86V25 355 aa16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 PHYKPLQ8IUZ5 450 aa16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 RNF31Q96EP0 1072 aa16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 VPS35Q96QK1 796 aa16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 VAT1Q99536 393 aa16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 DPH1Q9BZG8 443 aa16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 SEMA4CQ9C0C4 833 aa16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 OSGEPL1Q9H4B0 414 aa16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 ACSL6Q9UKU0 697 aa16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 WDR37Q9Y2I8 494 aa16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 SLC30A1Q9Y6M5 507 aa16.49■□□□□ 0.23
PDLIM7-215ENST00000506161 A8MU76 341 aa16.48■□□□□ 0.23
PDLIM7-215ENST00000506161 CCL22O00626 93 aa16.48■□□□□ 0.23
PDLIM7-215ENST00000506161 NVLO15381 856 aaKnown RBP16.48■□□□□ 0.23
PDLIM7-215ENST00000506161 SPAM1P38567 509 aa16.48■□□□□ 0.23
PDLIM7-215ENST00000506161 CLCNKAP51800 687 aa16.48■□□□□ 0.23
PDLIM7-215ENST00000506161 DRG2P55039 364 aaKnown RBP16.48■□□□□ 0.23
PDLIM7-215ENST00000506161 GDF10P55107 478 aa16.48■□□□□ 0.23
PDLIM7-215ENST00000506161 TMPRSS3P57727 454 aa16.48■□□□□ 0.23
PDLIM7-215ENST00000506161 KLF1Q13351 362 aaPredicted RBP16.48■□□□□ 0.23
PDLIM7-215ENST00000506161 RANBP10Q6VN20 620 aa16.48■□□□□ 0.23
PDLIM7-215ENST00000506161 FAM83HQ6ZRV2 1179 aaPredicted RBP16.48■□□□□ 0.23
PDLIM7-215ENST00000506161 GLT6D1Q7Z4J2 308 aa16.48■□□□□ 0.23
PDLIM7-215ENST00000506161 KIAA1328Q86T90 577 aa16.48■□□□□ 0.23
PDLIM7-215ENST00000506161 LRRTM4Q86VH4 590 aa16.48■□□□□ 0.23
PDLIM7-215ENST00000506161 RASGEF1AQ8N9B8 481 aa16.48■□□□□ 0.23
PDLIM7-215ENST00000506161 OR4D9Q8NGE8 314 aa16.48■□□□□ 0.23
PDLIM7-215ENST00000506161 TTC9Q92623 222 aa16.48■□□□□ 0.23
PDLIM7-215ENST00000506161 SLC38A3Q99624 504 aa16.48■□□□□ 0.23
PDLIM7-215ENST00000506161 SARS2Q9NP81 518 aaKnown RBP16.48■□□□□ 0.23
PDLIM7-215ENST00000506161 CPNE7Q9UBL6 633 aa16.48■□□□□ 0.23
PDLIM7-215ENST00000506161 EFR3BQ9Y2G0 817 aa16.48■□□□□ 0.23
PDLIM7-215ENST00000506161 TMX2-CTNND1H3BSU7 103 aa16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 K7ENP7 123 aa16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 CDK14O94921 469 aa16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 HLA-DPA1P20036 260 aa16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 RPL10P27635 214 aaKnown RBP16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 CDC25BP30305 580 aa16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 GFERP55789 205 aa16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 VAC14Q08AM6 782 aa16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 TMEM115Q12893 351 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 BIRC2Q13490 618 aa16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 CLCA4Q14CN2 919 aa16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 INSCQ1MX18 579 aa16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 SNAP47Q5SQN1 464 aa16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 PDPK2PQ6A1A2 396 aa16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 TMEM71Q6P5X7 295 aa16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 DARS2Q6PI48 645 aaKnown RBP16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 INO80CQ6PI98 192 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 DTX1Q86Y01 620 aa16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 KLHDC8BQ8IXV7 354 aa16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 BEND7Q8N7W2 519 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 BMPERQ8N8U9 685 aa16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 OR13C4Q8NGS5 318 aa16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 SNRNP27Q8WVK2 155 aaKnown RBP16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 JPH3Q8WXH2 748 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 SPATA13Q96N96 652 aa16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 CMKLR1Q99788 373 aa16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 LUC7LQ9NQ29 371 aaKnown RBP16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 PDP2Q9P2J9 529 aa16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 FKBPLQ9UIM3 349 aa16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 TRHDEQ9UKU6 1024 aa16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 ATMQ13315 3056 aa16.47■□□□□ 0.23
PDLIM7-215ENST00000506161 OR52A4PA6NMU1 304 aa16.46■□□□□ 0.23
PDLIM7-215ENST00000506161 SGTAO43765 313 aa16.46■□□□□ 0.23
PDLIM7-215ENST00000506161 WISP1O95388 367 aa16.46■□□□□ 0.23
PDLIM7-215ENST00000506161 METTL18O95568 372 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms