RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 GPR161Q8N6U8 529 aaKnown RBP4.88□□□□□ -1.63
LMNB1-208ENST00000504788 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.88□□□□□ -1.635e-8■■■■■ 60.8
LMNB1-208ENST00000504788 C2CD4AQ8NCU7 369 aaPredicted RBP4.88□□□□□ -1.63
LMNB1-208ENST00000504788 PPHLN1Q8NEY8 458 aaKnown RBP4.88□□□□□ -1.63
LMNB1-208ENST00000504788 OR4L1Q8NH43 312 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 CCL4L1Q8NHW4 92 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 GSDMBQ8TAX9 411 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 LKAAEAR1Q8TD35 194 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 MZB1Q8WU39 189 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 SCG3Q8WXD2 468 aaKnown RBP4.88□□□□□ -1.63
LMNB1-208ENST00000504788 IFT81Q8WYA0 676 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 CAVIN3Q969G5 261 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 ZNF669Q96BR6 464 aaPredicted RBP4.88□□□□□ -1.63
LMNB1-208ENST00000504788 LINC00615Q96LM1 132 aaPredicted RBP4.88□□□□□ -1.63
LMNB1-208ENST00000504788 FAM96AQ9H5X1 160 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 ASB8Q9H765 288 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 WDR26Q9H7D7 661 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 IL21RQ9HBE5 538 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 TRIM39Q9HCM9 518 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 ARFGAP3Q9NP61 516 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 SAYSD1Q9NPB0 183 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 TM7SF3Q9NS93 570 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 GALPQ9UBC7 116 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 SLC23A2Q9UGH3 650 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 ZC3H7BQ9UGR2 993 aaKnown RBP4.88□□□□□ -1.63
LMNB1-208ENST00000504788 ANKRD6Q9Y2G4 727 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 PKP3Q9Y446 797 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 NFS1Q9Y697 457 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 SNRNP200O75643 2136 aaKnown RBP4.88□□□□□ -1.63
LMNB1-208ENST00000504788 LY6G6EA0A0G2JKS1 128 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 A0A1B0GTQ1 180 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 PRSS38A1L453 326 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 GPR89AB7ZAQ6 455 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 NDC80O14777 642 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 CD3EAPO15446 510 aaKnown RBP4.88□□□□□ -1.63
LMNB1-208ENST00000504788 RIPK2O43353 540 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 LRP3O75074 770 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 HAUS5O94927 633 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 EML2O95834 649 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 LMNAP02545 664 aaKnown RBP4.88□□□□□ -1.63
LMNB1-208ENST00000504788 PYGLP06737 847 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 IVLP07476 585 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 GPR89BP0CG08 455 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 OGNP20774 298 aaKnown RBP4.88□□□□□ -1.63
LMNB1-208ENST00000504788 CD9P21926 228 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 RPS3P23396 243 aaKnown RBP eCLIP4.88□□□□□ -1.631e-6■■■□□ 16.7
LMNB1-208ENST00000504788 GPR1P46091 355 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 PRLHRP49683 370 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 HK3P52790 923 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 PGGT1BP53609 377 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 MPP1Q00013 466 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 DMPKQ09013 629 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 ITGA9Q13797 1035 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 ITIH4Q14624 930 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 STAT4Q14765 748 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 EFTUD2Q15029 972 aaKnown RBP eCLIP4.88□□□□□ -1.63
LMNB1-208ENST00000504788 CSRP2Q16527 193 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 DUOXA1Q1HG43 343 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 KBTBD12Q3ZCT8 623 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 BCL7AQ4VC05 210 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 TRIM61Q5EBN2 209 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 PRAMEF14Q5SWL7 426 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 RAET1GQ6H3X3 334 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 NEPROQ6NW34 567 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 CNSTQ6PJW8 725 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 AFTPHQ6ULP2 937 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 PRR23BQ6ZRT6 265 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 C3orf62Q6ZUJ4 267 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 SH2D5Q6ZV89 423 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 CEP68Q76N32 757 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 KCNMB4Q86W47 210 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 RBFAQ8N0V3 343 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 MREGQ8N565 214 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 LILRA3Q8N6C8 439 aaPredicted RBP4.88□□□□□ -1.63
LMNB1-208ENST00000504788 MYRIPQ8NFW9 859 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 OR56A4Q8NGH8 313 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 OR2I1PQ8NGU4 316 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 GIMAP7Q8NHV1 300 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 BAHD1Q8TBE0 780 aaPredicted RBP4.88□□□□□ -1.63
LMNB1-208ENST00000504788 GPBAR1Q8TDU6 330 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 SAP25Q8TEE9 199 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 PIGKQ92643 395 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 TSACCQ96A04 125 aaPredicted RBP4.88□□□□□ -1.63
LMNB1-208ENST00000504788 KLHDC7BQ96G42 594 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 WDR92Q96MX6 357 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 TCF12Q99081 682 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 ELF4Q99607 663 aaPredicted RBP4.88□□□□□ -1.63
LMNB1-208ENST00000504788 SLC30A3Q99726 388 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 LRRC61Q9BV99 259 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 SPATA16Q9BXB7 569 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 ACSS3Q9H6R3 686 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 LATS2Q9NRM7 1088 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 RAD18Q9NS91 495 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 UCKL1Q9NWZ5 548 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 ZDHHC3Q9NYG2 299 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 SLC6A14Q9UN76 642 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 GPR34Q9UPC5 381 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 TMEM98Q9Y2Y6 226 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 PLEKHM1Q9Y4G2 1056 aa4.88□□□□□ -1.63
LMNB1-208ENST00000504788 MAD1L1Q9Y6D9 718 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms