RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 MYL10Q9BUA6 226 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 CLEC5AQ9NY25 188 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 IL19Q9UHD0 177 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 CNOT6Q9ULM6 557 aaKnown RBP6.21□□□□□ -1.42
CLCN3-204ENST00000504131 UBQLN1Q9UMX0 589 aaKnown RBP6.21□□□□□ -1.42
CLCN3-204ENST00000504131 NSD2O96028 1365 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 ADGRF5Q8IZF2 1346 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 A0A087WWV3 80 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 CPED1A4D0V7 1026 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 SLC35F4A4IF30 521 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 M0QYV0 167 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 CFLARO15519 480 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 MED6O75586 246 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 COL6A2P12110 1019 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 MATN1P21941 496 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 ATP6V0D1P61421 351 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 ZNF33AQ06730 810 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 C1QBPQ07021 282 aaKnown RBP6.21□□□□□ -1.42
CLCN3-204ENST00000504131 RAB31Q13636 194 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 ZNF169Q14929 603 aaPredicted RBP6.21□□□□□ -1.42
CLCN3-204ENST00000504131 MAN2A1Q16706 1144 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 TRMT5Q32P41 509 aaKnown RBP6.21□□□□□ -1.42
CLCN3-204ENST00000504131 ZNF362Q5T0B9 420 aaPredicted RBP6.21□□□□□ -1.42
CLCN3-204ENST00000504131 USP49Q70CQ1 688 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 CYB5R4Q7L1T6 521 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 PHTF2Q8N3S3 785 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 FAM71DQ8N9W8 422 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 OR10T2Q8NGX3 314 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 OR14K1Q8NGZ2 314 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 ST8SIA4Q92187 359 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 AURKBQ96GD4 344 aaPredicted RBP6.21□□□□□ -1.42
CLCN3-204ENST00000504131 MEGF10Q96KG7 1140 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 OPALINQ96PE5 141 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 ULBP1Q9BZM6 244 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 PKIBQ9C010 78 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 SPRTNQ9H040 489 aaPredicted RBP6.21□□□□□ -1.42
CLCN3-204ENST00000504131 WWP1Q9H0M0 922 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 POLR1BQ9H9Y6 1135 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 CYP3A43Q9HB55 503 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 FZD3Q9NPG1 666 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 SCN3BQ9NY72 215 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 RPL26L1Q9UNX3 145 aaKnown RBP6.21□□□□□ -1.42
CLCN3-204ENST00000504131 AAR2Q9Y312 384 aaKnown RBP6.21□□□□□ -1.42
CLCN3-204ENST00000504131 SETD1AO15047 1707 aaKnown RBP6.21□□□□□ -1.42
CLCN3-204ENST00000504131 USP17L4A6NCW7 530 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 ADAM12O43184 909 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 ENO1P06733 434 aaKnown RBP6.21□□□□□ -1.42
CLCN3-204ENST00000504131 USP17L8P0C7I0 530 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 CLEC2LP0C7M8 214 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 DLSTP36957 453 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 HOXA1P49639 335 aaPredicted RBP6.21□□□□□ -1.42
CLCN3-204ENST00000504131 PEX3P56589 373 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 TAS2R60P59551 318 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 GNA12Q03113 381 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 PRKAA1Q13131 559 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 PAK1Q13153 545 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 NAE1Q13564 534 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 POLD3Q15054 466 aaPredicted RBP6.21□□□□□ -1.42
CLCN3-204ENST00000504131 PDK2Q15119 407 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 ZNF827Q17R98 1081 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 ZCCHC12Q6PEW1 402 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 KCTD8Q6ZWB6 473 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 GDPD3Q7L5L3 318 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 LINC00523Q86TU6 105 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 TSTD1Q8NFU3 115 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 LHFPL5Q8TAF8 219 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 PHF21BQ96EK2 531 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 UCK2Q9BZX2 261 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 PUS7LQ9H0K6 701 aaKnown RBP6.21□□□□□ -1.42
CLCN3-204ENST00000504131 IL20RAQ9UHF4 553 aa6.21□□□□□ -1.42
CLCN3-204ENST00000504131 ZNF705EA8MWA4 302 aaPredicted RBP6.2□□□□□ -1.42
CLCN3-204ENST00000504131 LOC110117498-PIK3R3F6TDL0 507 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 H0YIV9 168 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 NDUFS6O75380 124 aaKnown RBP6.2□□□□□ -1.42
CLCN3-204ENST00000504131 CYP3A4P08684 503 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 ACVR2AP27037 513 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 VEGFCP49767 419 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 MECP2P51608 486 aaKnown RBP6.2□□□□□ -1.42
CLCN3-204ENST00000504131 SLC12A3P55017 1021 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 TRA2BP62995 288 aaKnown RBP6.2□□□□□ -1.42
CLCN3-204ENST00000504131 POU4F1Q01851 419 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 CHRNEQ04844 493 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 CSTF1Q05048 431 aaKnown RBP6.2□□□□□ -1.42
CLCN3-204ENST00000504131 AARDQ4LEZ3 155 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 LRRC8EQ6NSJ5 796 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 FBXL13Q8NEE6 735 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 FAM45AQ8TCE6 357 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 NPRL2Q8WTW4 380 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 ELMO1Q92556 727 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 C12orf43Q96C57 262 aaKnown RBP6.2□□□□□ -1.42
CLCN3-204ENST00000504131 AP1S3Q96PC3 154 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 C11orf70Q9BRQ4 267 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 OSBPL7Q9BZF2 842 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 TM9SF3Q9HD45 589 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 KRCC1Q9NPI7 259 aaPredicted RBP6.2□□□□□ -1.42
CLCN3-204ENST00000504131 AMFRQ9UKV5 643 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 RIPK3Q9Y572 518 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 PCDHA11Q9Y5I1 949 aa6.2□□□□□ -1.42
CLCN3-204ENST00000504131 TNPO3Q9Y5L0 923 aaKnown RBP6.2□□□□□ -1.42
CLCN3-204ENST00000504131 PTPRMP28827 1452 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms