RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 SLC7A4O43246 635 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 CHRNGP07510 517 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 UGT1A5P35504 534 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 CHST9Q7L1S5 443 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 PCDH19Q8TAB3 1148 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 ADAMTS15Q8TE58 950 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 ROPN1LQ96C74 230 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 WDR12Q9GZL7 423 aaKnown RBP16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 IFT80Q9P2H3 777 aaPredicted RBP16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 SPEF2Q9C093 1822 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 CAPN8A6NHC0 703 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 NFATC1O95644 943 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 ASLP04424 464 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 ESRP1Q6NXG1 681 aaKnown RBP16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 THAP5Q7Z6K1 395 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 CIB1Q99828 191 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 KCPQ6ZWJ8 1503 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 GOT2P00505 430 aaKnown RBP16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 SERPINA1P01009 418 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 APODP05090 189 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 LIPEQ05469 1076 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 LDB1Q86U70 411 aaPredicted RBP16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 C2orf15Q8WU43 125 aaKnown RBP16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 NMUR1Q9HB89 426 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 U3KQV3 271 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 GPIP06744 558 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 OGNP20774 298 aaKnown RBP16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 RHAGQ02094 409 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 GTF2H2Q13888 395 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 GCNT6Q5T4J0 391 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 CLEC6AQ6EIG7 209 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 GTF2H2CQ6P1K8 395 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 BANPQ8N9N5 519 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 CLPTM1LQ96KA5 538 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 LENG8Q96PV6 779 aaPredicted RBP16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 C12orf65Q9H3J6 166 aaKnown RBP16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 GULP1Q9UBP9 304 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 SEC14L3Q9UDX4 400 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 GTF2IRD1Q9UHL9 959 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 MRTO4Q9UKD2 239 aaKnown RBP16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 ESR1P03372 595 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 IGFBP5P24593 272 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 PNLIPRP1P54315 467 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 VWA5B1Q5TIE3 1220 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 SULT1C3Q6IMI6 304 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 RALGPS2Q86X27 583 aaPredicted RBP16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 BRSK1Q8TDC3 778 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 LENG1Q96BZ8 264 aaPredicted RBP16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 GATA5Q9BWX5 397 aaPredicted RBP16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 MIR1-1HGQ9H1L0 117 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 PDP1Q9P0J1 537 aaPredicted RBP16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 CNTN6Q9UQ52 1028 aa16.4■□□□□ 0.22
PCDHA1-203ENST00000504120 POP4O95707 220 aaKnown RBP16.39■□□□□ 0.22
PCDHA1-203ENST00000504120 FABP3P05413 133 aa16.39■□□□□ 0.22
PCDHA1-203ENST00000504120 ELNP15502 786 aa16.39■□□□□ 0.22
PCDHA1-203ENST00000504120 IDSP22304 550 aa16.39■□□□□ 0.22
PCDHA1-203ENST00000504120 NAE1Q13564 534 aa16.39■□□□□ 0.22
PCDHA1-203ENST00000504120 NPY5RQ15761 445 aa16.39■□□□□ 0.22
PCDHA1-203ENST00000504120 LINGO4Q6UY18 593 aa16.39■□□□□ 0.22
PCDHA1-203ENST00000504120 RAD51AP1Q96B01 352 aa16.39■□□□□ 0.22
PCDHA1-203ENST00000504120 MCM8Q9UJA3 840 aa16.39■□□□□ 0.22
PCDHA1-203ENST00000504120 GNEQ9Y223 722 aaKnown RBP16.39■□□□□ 0.22
PCDHA1-203ENST00000504120 STBD1O95210 358 aa16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 IL12AP29459 219 aa16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 FSTL1Q12841 308 aa16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 LIN54Q6MZP7 749 aa16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 OR7D4Q8NG98 312 aa16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 MCRS1Q96EZ8 462 aa16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 C12orf42Q96LP6 360 aa16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 COQ7Q99807 217 aa16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 MYOCQ99972 504 aa16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 ITGB1BP2Q9UKP3 347 aa16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 MYBPHLA2RUH7 354 aa16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 FAM86C2PA6NEL3 165 aa16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 SCELO95171 688 aa16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 NADKO95544 446 aaPredicted RBP16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 NELFEP18615 380 aaKnown RBP16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 PTGER3P43115 390 aa16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 HSPA7P48741 367 aa16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 NDUFV1P49821 464 aa16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 SF1Q15637 639 aaKnown RBP16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 TMEM63BQ5T3F8 832 aa16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 NPAS4Q8IUM7 802 aa16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 NUSAP1Q9BXS6 441 aaKnown RBP16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 A8MUI8 341 aa16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 TULP3O75386 442 aa16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 C22orf31O95567 290 aa16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 EOMESO95936 686 aa16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 ANXA4P09525 319 aaPredicted RBP16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 DPYSL2Q16555 572 aa16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 ZNF572Q7Z3I7 529 aaPredicted RBP16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 ZNF781Q8N8C0 355 aa16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 ALG2Q9H553 416 aa16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 SMPD3Q9NY59 655 aaPredicted RBP16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 UBAP1Q9NZ09 502 aa16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 DTLQ9NZJ0 730 aa16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 MT-CYBP00156 380 aaPredicted RBP16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 C2orf80Q0P641 193 aa16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 CCNIQ14094 377 aa16.39■□□□□ 0.21
PCDHA1-203ENST00000504120 KIAA0930Q6ICG6 404 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms