RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 KRT35Q92764 455 aa21.75■■□□□ 1.07
LSM6-203ENST00000503982 QKIQ96PU8 341 aaKnown RBP eCLIP21.75■■□□□ 1.07
LSM6-203ENST00000503982 VAT1Q99536 393 aa21.75■■□□□ 1.07
LSM6-203ENST00000503982 TBC1D10AQ9BXI6 508 aa21.75■■□□□ 1.07
LSM6-203ENST00000503982 OCIAD1Q9NX40 245 aa21.75■■□□□ 1.07
LSM6-203ENST00000503982 NFKBIL1Q9UBC1 381 aaPredicted RBP21.75■■□□□ 1.07
LSM6-203ENST00000503982 TRIM10Q9UDY6 481 aa21.75■■□□□ 1.07
LSM6-203ENST00000503982 REXO2Q9Y3B8 237 aaKnown RBP21.75■■□□□ 1.07
LSM6-203ENST00000503982 GPR89AB7ZAQ6 455 aa21.74■■□□□ 1.07
LSM6-203ENST00000503982 PJA2O43164 708 aa21.74■■□□□ 1.07
LSM6-203ENST00000503982 VEGFDO43915 354 aa21.74■■□□□ 1.07
LSM6-203ENST00000503982 GPR89BP0CG08 455 aa21.74■■□□□ 1.07
LSM6-203ENST00000503982 CHRNA4P43681 627 aa21.74■■□□□ 1.07
LSM6-203ENST00000503982 SQSTM1Q13501 440 aa21.74■■□□□ 1.07
LSM6-203ENST00000503982 PPP2R5EQ16537 467 aa21.74■■□□□ 1.07
LSM6-203ENST00000503982 DCAF12Q5T6F0 453 aa21.74■■□□□ 1.07
LSM6-203ENST00000503982 KDELC1Q6UW63 502 aa21.74■■□□□ 1.07
LSM6-203ENST00000503982 LRRC8AQ8IWT6 810 aa21.74■■□□□ 1.07
LSM6-203ENST00000503982 PLEKHG4BQ96PX9 1271 aa21.74■■□□□ 1.07
LSM6-203ENST00000503982 FCRL5Q96RD9 977 aa21.74■■□□□ 1.07
LSM6-203ENST00000503982 TRABDQ9H4I3 376 aa21.74■■□□□ 1.07
LSM6-203ENST00000503982 HACD3Q9P035 362 aa21.74■■□□□ 1.07
LSM6-203ENST00000503982 B3GALT1Q9Y5Z6 326 aa21.74■■□□□ 1.07
LSM6-203ENST00000503982 ARHGAP6O43182 974 aa21.73■■□□□ 1.07
LSM6-203ENST00000503982 BUD23O43709 281 aaKnown RBP21.73■■□□□ 1.07
LSM6-203ENST00000503982 PTMAP06454 111 aaKnown RBP21.73■■□□□ 1.07
LSM6-203ENST00000503982 AMD1P17707 334 aa21.73■■□□□ 1.07
LSM6-203ENST00000503982 VCLP18206 1134 aa21.73■■□□□ 1.07
LSM6-203ENST00000503982 SPAM1P38567 509 aa21.73■■□□□ 1.07
LSM6-203ENST00000503982 EPHA4P54764 986 aa21.73■■□□□ 1.07
LSM6-203ENST00000503982 MPP3Q13368 585 aa21.73■■□□□ 1.07
LSM6-203ENST00000503982 ATP13A5Q4VNC0 1218 aa21.73■■□□□ 1.07
LSM6-203ENST00000503982 FAM151BQ6UXP7 276 aa21.73■■□□□ 1.07
LSM6-203ENST00000503982 TXLNBQ8N3L3 684 aa21.73■■□□□ 1.07
LSM6-203ENST00000503982 PMEPA1Q969W9 287 aa21.73■■□□□ 1.07
LSM6-203ENST00000503982 CXorf40BQ96DE9 158 aa21.73■■□□□ 1.07
LSM6-203ENST00000503982 TIMM29Q9BSF4 260 aa21.73■■□□□ 1.07
LSM6-203ENST00000503982 ASPSCR1Q9BZE9 553 aa21.73■■□□□ 1.07
LSM6-203ENST00000503982 B3GNT4Q9C0J1 378 aa21.73■■□□□ 1.07
LSM6-203ENST00000503982 C10orf88Q9H8K7 445 aa21.73■■□□□ 1.07
LSM6-203ENST00000503982 SLC23A2Q9UGH3 650 aa21.73■■□□□ 1.07
LSM6-203ENST00000503982 TRHDEQ9UKU6 1024 aa21.73■■□□□ 1.07
LSM6-203ENST00000503982 PKP3Q9Y446 797 aa21.73■■□□□ 1.07
LSM6-203ENST00000503982 LOC285095A0A1B0GVY8 99 aa21.72■■□□□ 1.07
LSM6-203ENST00000503982 APOC4-APOC2K7ER74 178 aa21.72■■□□□ 1.07
LSM6-203ENST00000503982 APOC2P02655 101 aa21.72■■□□□ 1.07
LSM6-203ENST00000503982 TYRP1P17643 537 aa21.72■■□□□ 1.07
LSM6-203ENST00000503982 HLA-DPA1P20036 260 aa21.72■■□□□ 1.07
LSM6-203ENST00000503982 IDSP22304 550 aa21.72■■□□□ 1.07
LSM6-203ENST00000503982 RPL10P27635 214 aaKnown RBP21.72■■□□□ 1.07
LSM6-203ENST00000503982 RBL1P28749 1068 aa21.72■■□□□ 1.07
LSM6-203ENST00000503982 HMGCLP35914 325 aa21.72■■□□□ 1.07
LSM6-203ENST00000503982 CETN2P41208 172 aa21.72■■□□□ 1.07
LSM6-203ENST00000503982 CLCNKAP51800 687 aa21.72■■□□□ 1.07
LSM6-203ENST00000503982 VAV2P52735 878 aa21.72■■□□□ 1.07
LSM6-203ENST00000503982 GEMP55040 296 aa21.72■■□□□ 1.07
LSM6-203ENST00000503982 RAB15P59190 212 aa21.72■■□□□ 1.07
LSM6-203ENST00000503982 ZDHHC20Q5W0Z9 365 aa21.72■■□□□ 1.07
LSM6-203ENST00000503982 ANKS6Q68DC2 871 aa21.72■■□□□ 1.07
LSM6-203ENST00000503982 ITPRIPL1Q6GPH6 555 aa21.72■■□□□ 1.07
LSM6-203ENST00000503982 WDR74Q6RFH5 385 aaPredicted RBP21.72■■□□□ 1.07
LSM6-203ENST00000503982 BBS12Q6ZW61 710 aa21.72■■□□□ 1.07
LSM6-203ENST00000503982 BRSK1Q8TDC3 778 aa21.72■■□□□ 1.07
LSM6-203ENST00000503982 ANP32BQ92688 251 aaKnown RBP21.72■■□□□ 1.07
LSM6-203ENST00000503982 MRGPRX2Q96LB1 330 aa21.72■■□□□ 1.07
LSM6-203ENST00000503982 VPS35Q96QK1 796 aa21.72■■□□□ 1.07
LSM6-203ENST00000503982 CTRCQ99895 268 aa21.72■■□□□ 1.07
LSM6-203ENST00000503982 ZCCHC2Q9C0B9 1178 aaKnown RBP21.72■■□□□ 1.07
LSM6-203ENST00000503982 ADGRG1Q9Y653 693 aa21.72■■□□□ 1.07
LSM6-203ENST00000503982 ATMQ13315 3056 aa21.71■■□□□ 1.07
LSM6-203ENST00000503982 A6NCN8 305 aa21.71■■□□□ 1.07
LSM6-203ENST00000503982 CHUKO15111 745 aa21.71■■□□□ 1.07
LSM6-203ENST00000503982 STK10O94804 968 aaKnown RBP21.71■■□□□ 1.07
LSM6-203ENST00000503982 TMEM115Q12893 351 aaPredicted RBP21.71■■□□□ 1.07
LSM6-203ENST00000503982 SLC1A5Q15758 541 aa21.71■■□□□ 1.07
LSM6-203ENST00000503982 DTX1Q86Y01 620 aa21.71■■□□□ 1.07
LSM6-203ENST00000503982 PLXDC1Q8IUK5 500 aa21.71■■□□□ 1.07
LSM6-203ENST00000503982 OXNAD1Q96HP4 312 aaPredicted RBP21.71■■□□□ 1.07
LSM6-203ENST00000503982 FICDQ9BVA6 458 aa21.71■■□□□ 1.07
LSM6-203ENST00000503982 DDA1Q9BW61 102 aa21.71■■□□□ 1.07
LSM6-203ENST00000503982 SEMA4CQ9C0C4 833 aa21.71■■□□□ 1.07
LSM6-203ENST00000503982 EPB41L1Q9H4G0 881 aa21.71■■□□□ 1.07
LSM6-203ENST00000503982 SCHIP1Q9P0W5 487 aaPredicted RBP21.71■■□□□ 1.07
LSM6-203ENST00000503982 PCDHGA4Q9Y5G9 962 aa21.71■■□□□ 1.07
LSM6-203ENST00000503982 PCDHGA3Q9Y5H0 932 aa21.71■■□□□ 1.07
LSM6-203ENST00000503982 GLYATL1P3A0A0U1RQE8 302 aa21.7■■□□□ 1.06
LSM6-203ENST00000503982 B4E171 279 aa21.7■■□□□ 1.06
LSM6-203ENST00000503982 STX7O15400 261 aaKnown RBP21.7■■□□□ 1.06
LSM6-203ENST00000503982 ANXA9O76027 345 aa21.7■■□□□ 1.06
LSM6-203ENST00000503982 PBLDP30039 288 aaPredicted RBP21.7■■□□□ 1.06
LSM6-203ENST00000503982 AKT1P31749 480 aa21.7■■□□□ 1.06
LSM6-203ENST00000503982 TSPAN7P41732 249 aa21.7■■□□□ 1.06
LSM6-203ENST00000503982 HALP42357 657 aa21.7■■□□□ 1.06
LSM6-203ENST00000503982 DRG2P55039 364 aaKnown RBP21.7■■□□□ 1.06
LSM6-203ENST00000503982 COPS2P61201 443 aa21.7■■□□□ 1.06
LSM6-203ENST00000503982 XRCC4Q13426 336 aa21.7■■□□□ 1.06
LSM6-203ENST00000503982 PRPSAP1Q14558 356 aa21.7■■□□□ 1.06
LSM6-203ENST00000503982 CHRNA6Q15825 494 aa21.7■■□□□ 1.06
LSM6-203ENST00000503982 KHDC1Q4VXA5 237 aaKnown RBP21.7■■□□□ 1.06
LSM6-203ENST00000503982 CEACAM20Q6UY09 585 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms