RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	GOLGA8R	I6L899	631 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	RAD51B	O15315	384 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	PHGDH	O43175	533 aa	Known RBP	12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	PI15	O43692	258 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	ZNF217	O75362	1048 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	SEMA4F	O95754	770 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	TBC1D3H	P0C7X1	549 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	BRAF	P15056	766 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	STMN1	P16949	149 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	AOC1	P19801	751 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	CRABP2	P29373	138 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	TYK2	P29597	1187 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	OXTR	P30559	389 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	HOXA6	P31267	233 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	IGFALS	P35858	605 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	GMPR	P36959	345 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	GPR1	P46091	355 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	PGGT1B	P53609	377 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	LRRC14	Q15048	493 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	IRF4	Q15306	451 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	PPM1J	Q5JR12	505 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	LDLRAP1	Q5SW96	308 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	TBC1D3G	Q6DHY5	549 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	RAET1G	Q6H3X3	334 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	TBC1D3C	Q6IPX1	549 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	PNCK	Q6P2M8	343 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	TMEM207	Q6UWW9	146 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	CDHR3	Q6ZTQ4	885 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	CCDC91	Q7Z6B0	441 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	PHYKPL	Q8IUZ5	450 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	TBC1D3	Q8IZP1	549 aa	Predicted RBP	12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	LKAAEAR1	Q8TD35	194 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	HEXDC	Q8WVB3	486 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	APOPT1	Q96IL0	206 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	CABS1	Q96KC9	395 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	SMC6	Q96SB8	1091 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	UHRF1	Q96T88	793 aa	Predicted RBP	12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	TMUB1	Q9BVT8	246 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	LATS2	Q9NRM7	1088 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	PCMTD2	Q9NV79	361 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	CYP8B1	Q9UNU6	501 aa		12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	SMG5	Q9UPR3	1016 aa	Known RBP	12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	OAS3	Q9Y6K5	1087 aa	Known RBP	12.01	□□□□□ -0.49
MATR3-231	ENST00000502394	NCOR1	O75376	2440 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394		A0A096LPK6	155 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	TMEM120B	A0PK00	339 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394		H3BMM5	538 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	NIPSNAP2	O75323	286 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	SPAG7	O75391	227 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	AP2A2	O94973	939 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	TOP3B	O95985	862 aa	Known RBP	12	□□□□□ -0.49
MATR3-231	ENST00000502394	PAK4	O96013	591 aa	Predicted RBP	12	□□□□□ -0.49
MATR3-231	ENST00000502394	IGHV4-34	P06331	123 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	TDGF1	P13385	188 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	CD6	P30203	668 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	HPD	P32754	393 aa	Predicted RBP	12	□□□□□ -0.49
MATR3-231	ENST00000502394	CRHR1	P34998	444 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	ETV4	P43268	484 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	CXCL12	P48061	93 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	CCR3	P51677	355 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	CCR5	P51681	352 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	CLCN7	P51798	805 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	IRF9	Q00978	393 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	DLG1	Q12959	904 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	ZNF460	Q14592	562 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	INSC	Q1MX18	579 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	PIM3	Q86V86	326 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	CENPL	Q8N0S6	344 aa	Predicted RBP	12	□□□□□ -0.49
MATR3-231	ENST00000502394	PLD6	Q8N2A8	252 aa	Known RBP	12	□□□□□ -0.49
MATR3-231	ENST00000502394	PGBD3	Q8N328	593 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	CLDN19	Q8N6F1	224 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	GIMAP7	Q8NHV1	300 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	FAM76A	Q8TAV0	307 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	CD200R1	Q8TD46	325 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	KLK6	Q92876	244 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	FUBP1	Q96AE4	644 aa	Known RBP	12	□□□□□ -0.49
MATR3-231	ENST00000502394	TSPAN17	Q96FV3	270 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	TOE1	Q96GM8	510 aa	Known RBP	12	□□□□□ -0.49
MATR3-231	ENST00000502394	UBXN10	Q96LJ8	280 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	GPR78	Q96P69	363 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	SLC30A3	Q99726	388 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	TEX101	Q9BY14	249 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	FAM126A	Q9BYI3	521 aa	Predicted RBP	12	□□□□□ -0.49
MATR3-231	ENST00000502394	TPSD1	Q9BZJ3	242 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	CLPB	Q9H078	707 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	EBF2	Q9HAK2	575 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	PRMT8	Q9NR22	394 aa	Predicted RBP	12	□□□□□ -0.49
MATR3-231	ENST00000502394	KLHL42	Q9P2K6	505 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	GALP	Q9UBC7	116 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	GNPTG	Q9UJJ9	305 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	ANKRD6	Q9Y2G4	727 aa		12	□□□□□ -0.49
MATR3-231	ENST00000502394	PLXND1	Q9Y4D7	1925 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	DOCK9	Q9BZ29	2069 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394		A0A087X1B8	175 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	PRR23A	A6NEV1	266 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	FAM47DP	A6NHR8	397 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	IQCF5	A8MTL0	148 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	INPP4B	O15327	924 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	LILRB5	O75023	590 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	GLRA3	O75311	464 aa		11.99	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms