RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 KRCC1Q9NPI7 259 aaPredicted RBP3.63□□□□□ -1.83
CALD1-224ENST00000498254 DDX25Q9UHL0 483 aaKnown RBP3.63□□□□□ -1.83
CALD1-224ENST00000498254 KLHL20Q9Y2M5 609 aa3.63□□□□□ -1.83
CALD1-224ENST00000498254 RAI2Q9Y5P3 530 aa3.63□□□□□ -1.83
CALD1-224ENST00000498254 INSL5Q9Y5Q6 135 aa3.63□□□□□ -1.83
CALD1-224ENST00000498254 SQORQ9Y6N5 450 aa3.63□□□□□ -1.83
CALD1-224ENST00000498254 ZMYM2Q9UBW7 1377 aa3.63□□□□□ -1.83
CALD1-224ENST00000498254 A0A0U1RQK1 487 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 ZNF320A2RRD8 509 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 OR6C76A6NM76 312 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 PLK4O00444 970 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 SOCS6O14544 535 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 HS3ST1O14792 307 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 PSMA7O14818 248 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 SPINT2O43291 252 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 PRAMEF11O60813 436 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 NDUFS7O75251 213 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 ZNF217O75362 1048 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 EPN2O95208 641 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 STX2P32856 288 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 PCGF2P35227 344 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 APOBEC1P41238 236 aaKnown RBP3.62□□□□□ -1.83
CALD1-224ENST00000498254 CRKLP46109 303 aaKnown RBP3.62□□□□□ -1.83
CALD1-224ENST00000498254 ALDH7A1P49419 539 aaKnown RBP3.62□□□□□ -1.83
CALD1-224ENST00000498254 BMXP51813 675 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 CAPZA1P52907 286 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 TAS2R38P59533 333 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 ST3GAL1Q11201 340 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 SLMAPQ14BN4 828 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 CTF1Q16619 201 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 SMN1Q16637 294 aaKnown RBP3.62□□□□□ -1.83
CALD1-224ENST00000498254 ZNF674Q2M3X9 581 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 PRTGQ2VWP7 1150 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 GLIPR1L2Q4G1C9 344 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 MANEAQ5SRI9 462 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 WDR73Q6P4I2 378 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 KCTD18Q6PI47 426 aaPredicted RBP3.62□□□□□ -1.83
CALD1-224ENST00000498254 FIGLAQ6QHK4 219 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 PIWIL3Q7Z3Z3 882 aaKnown RBP3.62□□□□□ -1.83
CALD1-224ENST00000498254 MFN1Q8IWA4 741 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 SIX6OS1Q8N1H7 587 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 CARNMT1Q8N4J0 409 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 TMCO5AQ8N6Q1 288 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 EMC1Q8N766 993 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 MSANTD4Q8NCY6 345 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 UTP15Q8TED0 518 aaKnown RBP3.62□□□□□ -1.83
CALD1-224ENST00000498254 SLC44A1Q8WWI5 657 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 OIT3Q8WWZ8 545 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 SLC25A28Q96A46 364 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 EXOC4Q96A65 974 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 CHFRQ96EP1 664 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 INTS14Q96SY0 518 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 CSF3RQ99062 836 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 GFI1Q99684 422 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 ABHD6Q9BV23 337 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 ANKZF1Q9H8Y5 726 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 COPS7BQ9H9Q2 264 aaPredicted RBP3.62□□□□□ -1.83
CALD1-224ENST00000498254 FZD3Q9NPG1 666 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 DDX43Q9NXZ2 648 aaKnown RBP3.62□□□□□ -1.83
CALD1-224ENST00000498254 ACSL5Q9ULC5 683 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 RNF150Q9ULK6 438 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 PADI3Q9ULW8 664 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 KCNK7Q9Y2U2 307 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 LIPGQ9Y5X9 500 aa3.62□□□□□ -1.83
CALD1-224ENST00000498254 A0A1W2PPM1 405 aa3.61□□□□□ -1.83
CALD1-224ENST00000498254 A4D1N5 150 aa3.61□□□□□ -1.83
CALD1-224ENST00000498254 GAGE12JA6NER3 117 aa3.61□□□□□ -1.83
CALD1-224ENST00000498254 TRIM77I1YAP6 450 aa3.61□□□□□ -1.83
CALD1-224ENST00000498254 MEIS2O14770 477 aa3.61□□□□□ -1.83
CALD1-224ENST00000498254 ANKRD28O15084 1053 aa3.61□□□□□ -1.83
CALD1-224ENST00000498254 WDR46O15213 610 aaKnown RBP3.61□□□□□ -1.83
CALD1-224ENST00000498254 CNOT3O75175 753 aaKnown RBP3.61□□□□□ -1.83
CALD1-224ENST00000498254 TOMM70O94826 608 aa3.61□□□□□ -1.83
CALD1-224ENST00000498254 SYF2O95926 243 aaKnown RBP3.61□□□□□ -1.83
CALD1-224ENST00000498254 SUPT20HL2P0C7V6 817 aa3.61□□□□□ -1.83
CALD1-224ENST00000498254 ARSBP15848 533 aa3.61□□□□□ -1.83
CALD1-224ENST00000498254 NAGAP17050 411 aa3.61□□□□□ -1.83
CALD1-224ENST00000498254 CYP11B2P19099 503 aa3.61□□□□□ -1.83
CALD1-224ENST00000498254 GNLYP22749 145 aa3.61□□□□□ -1.83
CALD1-224ENST00000498254 HNRNPH2P55795 449 aaKnown RBP3.61□□□□□ -1.83
CALD1-224ENST00000498254 KRTAP10-7P60409 375 aaPredicted RBP3.61□□□□□ -1.83
CALD1-224ENST00000498254 ZP1P60852 638 aa3.61□□□□□ -1.83
CALD1-224ENST00000498254 HNRNPKP61978 463 aaKnown RBP eCLIP3.61□□□□□ -1.83
CALD1-224ENST00000498254 YWHAHQ04917 246 aaPredicted RBP3.61□□□□□ -1.83
CALD1-224ENST00000498254 SCN1BQ07699 218 aa3.61□□□□□ -1.83
CALD1-224ENST00000498254 ACSM1Q08AH1 577 aa3.61□□□□□ -1.83
CALD1-224ENST00000498254 ZNF273Q14593 569 aa3.61□□□□□ -1.83
CALD1-224ENST00000498254 RBMS2Q15434 407 aaKnown RBP3.61□□□□□ -1.83
CALD1-224ENST00000498254 VWC2Q2TAL6 325 aa3.61□□□□□ -1.83
CALD1-224ENST00000498254 KLHL26Q53HC5 615 aa3.61□□□□□ -1.83
CALD1-224ENST00000498254 NHSL2Q5HYW2 709 aa3.61□□□□□ -1.83
CALD1-224ENST00000498254 C10orf25Q5T742 122 aa3.61□□□□□ -1.83
CALD1-224ENST00000498254 ZDHHC20Q5W0Z9 365 aa3.61□□□□□ -1.83
CALD1-224ENST00000498254 RGMBQ6NW40 437 aa3.61□□□□□ -1.83
CALD1-224ENST00000498254 ADGRG3Q86Y34 549 aa3.61□□□□□ -1.83
CALD1-224ENST00000498254 CHCHD4Q8N4Q1 142 aa3.61□□□□□ -1.83
CALD1-224ENST00000498254 NANOGP1Q8N7R0 232 aa3.61□□□□□ -1.83
CALD1-224ENST00000498254 ARL10Q8N8L6 244 aa3.61□□□□□ -1.83
CALD1-224ENST00000498254 OR2AJ1Q8NGZ0 328 aa3.61□□□□□ -1.83
CALD1-224ENST00000498254 TMEM163Q8TC26 289 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms