RNA–Protein interactions for RNA: ENST00000498007.1

HLA-B-255, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,087 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-255ENST00000498007 LY6G6EA0A0G2JKS1 128 aa19.53■□□□□ 0.72
HLA-B-255ENST00000498007 AGAP14A8MT82 685 aa19.53■□□□□ 0.72
HLA-B-255ENST00000498007 CHUKO15111 745 aa19.53■□□□□ 0.72
HLA-B-255ENST00000498007 KMOO15229 486 aa19.53■□□□□ 0.72
HLA-B-255ENST00000498007 ACRV1P26436 265 aa19.53■□□□□ 0.72
HLA-B-255ENST00000498007 IVDP26440 423 aa19.53■□□□□ 0.72
HLA-B-255ENST00000498007 ACADVLP49748 655 aa19.53■□□□□ 0.72
HLA-B-255ENST00000498007 CTSCP53634 463 aa19.53■□□□□ 0.72
HLA-B-255ENST00000498007 ACVR1Q04771 509 aa19.53■□□□□ 0.72
HLA-B-255ENST00000498007 SMAD1Q15797 465 aaKnown RBP19.53■□□□□ 0.72
HLA-B-255ENST00000498007 MAATS1Q7Z4T9 603 aa19.53■□□□□ 0.72
HLA-B-255ENST00000498007 ZNF547Q8IVP9 402 aa19.53■□□□□ 0.72
HLA-B-255ENST00000498007 SFTPA2Q8IWL1 248 aa19.53■□□□□ 0.72
HLA-B-255ENST00000498007 PIANPQ8IYJ0 282 aa19.53■□□□□ 0.72
HLA-B-255ENST00000498007 PEX13Q92968 403 aa19.53■□□□□ 0.72
HLA-B-255ENST00000498007 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.53■□□□□ 0.72
HLA-B-255ENST00000498007 COPS8Q99627 209 aa19.53■□□□□ 0.72
HLA-B-255ENST00000498007 KIFC1Q9BW19 673 aa19.53■□□□□ 0.72
HLA-B-255ENST00000498007 OSGEPL1Q9H4B0 414 aa19.53■□□□□ 0.72
HLA-B-255ENST00000498007 MRM3Q9HC36 420 aaKnown RBP19.53■□□□□ 0.72
HLA-B-255ENST00000498007 SPATS2LQ9NUQ6 558 aaKnown RBP19.53■□□□□ 0.72
HLA-B-255ENST00000498007 EVA1BQ9NVM1 165 aa19.53■□□□□ 0.72
HLA-B-255ENST00000498007 TOR4AQ9NXH8 423 aa19.53■□□□□ 0.72
HLA-B-255ENST00000498007 APOBEC2Q9Y235 224 aaKnown RBP19.53■□□□□ 0.72
HLA-B-255ENST00000498007 DNAJC16Q9Y2G8 782 aa19.53■□□□□ 0.72
HLA-B-255ENST00000498007 MRFAP1Q9Y605 127 aa19.53■□□□□ 0.72
HLA-B-255ENST00000498007 U3KQA8 63 aa19.53■□□□□ 0.72
HLA-B-255ENST00000498007 TRBV5-4A0A0C4DH59 114 aa19.52■□□□□ 0.72
HLA-B-255ENST00000498007 FAM187AA6NFU0 413 aa19.52■□□□□ 0.72
HLA-B-255ENST00000498007 SEC31AO94979 1220 aaKnown RBP19.52■□□□□ 0.72
HLA-B-255ENST00000498007 RALBP11234 206 aa19.52■□□□□ 0.72
HLA-B-255ENST00000498007 CKMT1AP12532 417 aa19.52■□□□□ 0.72
HLA-B-255ENST00000498007 PBLDP30039 288 aaPredicted RBP19.52■□□□□ 0.72
HLA-B-255ENST00000498007 FOXN2P32314 431 aa19.52■□□□□ 0.72
HLA-B-255ENST00000498007 RPIAP49247 311 aa19.52■□□□□ 0.72
HLA-B-255ENST00000498007 ITGA8P53708 1063 aa19.52■□□□□ 0.72
HLA-B-255ENST00000498007 B4GALNT1Q00973 533 aa19.52■□□□□ 0.72
HLA-B-255ENST00000498007 MORF4L2Q15014 288 aa19.52■□□□□ 0.72
HLA-B-255ENST00000498007 FNBP1LQ5T0N5 605 aa19.52■□□□□ 0.72
HLA-B-255ENST00000498007 N4BP2L1Q5TBK1 243 aaPredicted RBP19.52■□□□□ 0.72
HLA-B-255ENST00000498007 TMEM220Q6QAJ8 160 aa19.52■□□□□ 0.72
HLA-B-255ENST00000498007 SLCO6A1Q86UG4 719 aa19.52■□□□□ 0.72
HLA-B-255ENST00000498007 OR4L1Q8NH43 312 aa19.52■□□□□ 0.72
HLA-B-255ENST00000498007 ZDHHC1Q8WTX9 485 aa19.52■□□□□ 0.72
HLA-B-255ENST00000498007 MFSD3Q96ES6 412 aa19.52■□□□□ 0.72
HLA-B-255ENST00000498007 TRIM56Q9BRZ2 755 aaKnown RBP19.52■□□□□ 0.72
HLA-B-255ENST00000498007 DPH5Q9H2P9 285 aa19.52■□□□□ 0.72
HLA-B-255ENST00000498007 KLC4Q9NSK0 619 aa19.52■□□□□ 0.72
HLA-B-255ENST00000498007 TREX1Q9NSU2 369 aa19.52■□□□□ 0.72
HLA-B-255ENST00000498007 ZDHHC3Q9NYG2 299 aa19.52■□□□□ 0.72
HLA-B-255ENST00000498007 NCKIPSDQ9NZQ3 722 aa19.52■□□□□ 0.72
HLA-B-255ENST00000498007 SNX24Q9Y343 169 aa19.52■□□□□ 0.72
HLA-B-255ENST00000498007 MAD1L1Q9Y6D9 718 aa19.52■□□□□ 0.72
HLA-B-255ENST00000498007 CPED1A4D0V7 1026 aa19.51■□□□□ 0.71
HLA-B-255ENST00000498007 SDR42E2A6NKP2 422 aa19.51■□□□□ 0.71
HLA-B-255ENST00000498007 CFAP99D6REC4 459 aa19.51■□□□□ 0.71
HLA-B-255ENST00000498007 SNX2O60749 519 aa19.51■□□□□ 0.71
HLA-B-255ENST00000498007 RFPL3O75679 317 aa19.51■□□□□ 0.71
HLA-B-255ENST00000498007 ZNF7P17097 686 aaPredicted RBP19.51■□□□□ 0.71
HLA-B-255ENST00000498007 ACP1P24666 158 aa19.51■□□□□ 0.71
HLA-B-255ENST00000498007 MAGEA3P43357 314 aa19.51■□□□□ 0.71
HLA-B-255ENST00000498007 RPL21P46778 160 aaKnown RBP19.51■□□□□ 0.71
HLA-B-255ENST00000498007 DUSP3P51452 185 aaPredicted RBP19.51■□□□□ 0.71
HLA-B-255ENST00000498007 DBN1Q16643 649 aa19.51■□□□□ 0.71
HLA-B-255ENST00000498007 FASTKD1Q53R41 847 aaKnown RBP19.51■□□□□ 0.71
HLA-B-255ENST00000498007 GUSBP11Q6P575 273 aa19.51■□□□□ 0.71
HLA-B-255ENST00000498007 AGGF1Q8N302 714 aaeCLIP19.51■□□□□ 0.71
HLA-B-255ENST00000498007 OTUD6BQ8N6M0 293 aa19.51■□□□□ 0.71
HLA-B-255ENST00000498007 BEND7Q8N7W2 519 aaPredicted RBP19.51■□□□□ 0.71
HLA-B-255ENST00000498007 ZNF669Q96BR6 464 aaPredicted RBP19.51■□□□□ 0.71
HLA-B-255ENST00000498007 SGF29Q96ES7 293 aa19.51■□□□□ 0.71
HLA-B-255ENST00000498007 TIMM29Q9BSF4 260 aa19.51■□□□□ 0.71
HLA-B-255ENST00000498007 CATSPERZQ9NTU4 200 aa19.51■□□□□ 0.71
HLA-B-255ENST00000498007 SLC23A2Q9UGH3 650 aa19.51■□□□□ 0.71
HLA-B-255ENST00000498007 PCNX2A6NKB5 2137 aa19.51■□□□□ 0.71
HLA-B-255ENST00000498007 BANF1O75531 89 aa19.5■□□□□ 0.71
HLA-B-255ENST00000498007 MAZP56270 477 aaKnown RBP19.5■□□□□ 0.71
HLA-B-255ENST00000498007 FOXC1Q12948 553 aa19.5■□□□□ 0.71
HLA-B-255ENST00000498007 SEPT7Q16181 437 aaKnown RBP19.5■□□□□ 0.71
HLA-B-255ENST00000498007 HIBCHQ6NVY1 386 aaPredicted RBP19.5■□□□□ 0.71
HLA-B-255ENST00000498007 EFL1Q7Z2Z2 1120 aaKnown RBP19.5■□□□□ 0.71
HLA-B-255ENST00000498007 IFI44Q8TCB0 444 aa19.5■□□□□ 0.71
HLA-B-255ENST00000498007 PATE1Q8WXA2 126 aa19.5■□□□□ 0.71
HLA-B-255ENST00000498007 PWWP2AQ96N64 755 aa19.5■□□□□ 0.71
HLA-B-255ENST00000498007 ERP44Q9BS26 406 aa19.5■□□□□ 0.71
HLA-B-255ENST00000498007 FAM8A1Q9UBU6 413 aa19.5■□□□□ 0.71
HLA-B-255ENST00000498007 ANAPC5Q9UJX4 755 aa19.5■□□□□ 0.71
HLA-B-255ENST00000498007 PADI4Q9UM07 663 aa19.5■□□□□ 0.71
HLA-B-255ENST00000498007 CNOT1A5YKK6 2376 aaKnown RBP19.5■□□□□ 0.71
HLA-B-255ENST00000498007 NOBOXO60393 691 aa19.49■□□□□ 0.71
HLA-B-255ENST00000498007 VAPBO95292 243 aa19.49■□□□□ 0.71
HLA-B-255ENST00000498007 EML2O95834 649 aa19.49■□□□□ 0.71
HLA-B-255ENST00000498007 ATP1B2P14415 290 aaPredicted RBP19.49■□□□□ 0.71
HLA-B-255ENST00000498007 VCLP18206 1134 aa19.49■□□□□ 0.71
HLA-B-255ENST00000498007 PAMP19021 973 aa19.49■□□□□ 0.71
HLA-B-255ENST00000498007 DHX9Q08211 1270 aaKnown RBP19.49■□□□□ 0.71
HLA-B-255ENST00000498007 SEMA3AQ14563 771 aa19.49■□□□□ 0.71
HLA-B-255ENST00000498007 BBS9Q3SYG4 887 aa19.49■□□□□ 0.71
HLA-B-255ENST00000498007 C14orf28Q4W4Y0 310 aa19.49■□□□□ 0.71
HLA-B-255ENST00000498007 DNAJC21Q5F1R6 531 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms