RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 VANGL1Q8TAA9 524 aaPredicted RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 SETD7Q8WTS6 366 aaKnown RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 DNAJA4Q8WW22 397 aaPredicted RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 GAB3Q8WWW8 586 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 HTR3CQ8WXA8 447 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 CPA5Q8WXQ8 436 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 PRCCQ92733 491 aaPredicted RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 MARC2Q969Z3 335 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 PHF21BQ96EK2 531 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 ZNF578Q96N58 590 aaPredicted RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 CCNL2Q96S94 520 aaPredicted RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 KCNS3Q9BQ31 491 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 NEURL2Q9BR09 285 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 ZNF717Q9BY31 904 aaPredicted RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 CELF4Q9BZC1 486 aaKnown RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 ANKRD2Q9GZV1 360 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 OPA3Q9H6K4 179 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 KAT14Q9H8E8 782 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 AGO3Q9H9G7 860 aaKnown RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 CABP5Q9NP86 173 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 IL26Q9NPH9 171 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 C19orf12Q9NSK7 152 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 TBC1D23Q9NUY8 699 aa3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 FAM120CQ9NX05 1096 aaKnown RBP3.09□□□□□ -1.91
SNRNP48-202ENST00000496946 SYNJ1O43426 1573 aa3.09□□□□□ -1.92
SNRNP48-202ENST00000496946 KDM3AQ9Y4C1 1321 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 SMIM31A0A1B0GVY4 71 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 DENND3A2RUS2 1198 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 AQP12BA6NM10 295 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 LINC00587B1AMM8 73 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 TCP11X1B4DZS4 312 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 GTPBP1O00178 669 aaKnown RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 CD3EAPO15446 510 aaKnown RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 NOBOXO60393 691 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 PPP6R2O75170 966 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 CDH16O75309 829 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 TBX10O75333 385 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 PRDM1O75626 825 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 GPX5O75715 221 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 IPO13O94829 963 aaKnown RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 CCNB2O95067 398 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 PTBP3O95758 552 aaKnown RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 GSTA1P08263 222 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 STSP08842 583 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 HBQ1P09105 142 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 TCP1P17987 556 aaKnown RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 HK1P19367 917 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 AKAP5P24588 427 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 GCH1P30793 250 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 SERPINB5P36952 375 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 GP5P40197 560 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 CD79BP40259 229 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 SLC11A1P49279 550 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 SLC26A2P50443 739 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 STX1BP61266 288 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 ATP6V0D1P61421 351 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 NAA20P61599 178 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 UBE3AQ05086 875 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 ABRQ12979 859 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 SLC12A1Q13621 1099 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 ACVR2BQ13705 512 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 SSX2Q16385 188 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 CCDC142Q17RM4 750 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 MPEG1Q2M385 716 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 TMEM63BQ5T3F8 832 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 ATPAF1Q5TC12 328 aaPredicted RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 KRT79Q5XKE5 535 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 ZSCAN25Q6NSZ9 544 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 ESRP1Q6NXG1 681 aaKnown RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 PET117Q6UWS5 81 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 OTOP2Q7RTS6 562 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 EFL1Q7Z2Z2 1120 aaKnown RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 HEATR3Q7Z4Q2 680 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 FRMD5Q7Z6J6 570 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 SETD3Q86TU7 594 aaPredicted RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 PRPF39Q86UA1 669 aaKnown RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 ADGRG5Q8IZF4 528 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 ZCCHC7Q8N3Z6 543 aaKnown RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF248Q8NDW4 579 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 OR6J1Q8NGC5 347 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF473Q8WTR7 871 aaKnown RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 RIN2Q8WYP3 895 aaPredicted RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 RAPGEF4Q8WZA2 1011 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 JADE3Q92613 823 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 THRSPQ92748 146 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 TAMM41Q96BW9 452 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 CYFIP2Q96F07 1278 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 ZBED3Q96IU2 234 aaPredicted RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 FAR2Q96K12 515 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 C17orf62Q9BQA9 187 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 CHID1Q9BWS9 393 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 C1QTNF7Q9BXJ2 289 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 NT5MQ9NPB1 228 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 NRIP3Q9NQ35 241 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 TIGARQ9NQ88 270 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 DECR2Q9NUI1 292 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 FBXO28Q9NVF7 368 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 EXD2Q9NVH0 621 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 TAS2R10Q9NYW0 307 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms