RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 RPS6KL1Q9Y6S9 549 aa5.37□□□□□ -1.55
SF3B1-212ENST00000496458 MAP2K7O14733 419 aa5.36□□□□□ -1.55
SF3B1-212ENST00000496458 AMBPP02760 352 aa5.36□□□□□ -1.55
SF3B1-212ENST00000496458 ZNF23P17027 643 aa5.36□□□□□ -1.55
SF3B1-212ENST00000496458 BDNFP23560 247 aa5.36□□□□□ -1.55
SF3B1-212ENST00000496458 PSMA4P25789 261 aaKnown RBP5.36□□□□□ -1.55
SF3B1-212ENST00000496458 TFAP4Q01664 338 aa5.36□□□□□ -1.55
SF3B1-212ENST00000496458 LRMPQ12912 555 aa5.36□□□□□ -1.55
SF3B1-212ENST00000496458 ACVR2BQ13705 512 aa5.36□□□□□ -1.55
SF3B1-212ENST00000496458 ADAM5Q6NVV9 412 aa5.36□□□□□ -1.55
SF3B1-212ENST00000496458 EMC1Q8N766 993 aa5.36□□□□□ -1.55
SF3B1-212ENST00000496458 GPATCH11Q8N954 259 aa5.36□□□□□ -1.55
SF3B1-212ENST00000496458 RBM15BQ8NDT2 890 aaKnown RBP5.36□□□□□ -1.55
SF3B1-212ENST00000496458 SCRN2Q96FV2 425 aa5.36□□□□□ -1.55
SF3B1-212ENST00000496458 DUX3Q96PT4 197 aa5.36□□□□□ -1.55
SF3B1-212ENST00000496458 TFB2MQ9H5Q4 396 aaKnown RBP5.36□□□□□ -1.55
SF3B1-212ENST00000496458 EPB41L5Q9HCM4 733 aa5.36□□□□□ -1.55
SF3B1-212ENST00000496458 DIAPH3Q9NSV4 1193 aa5.36□□□□□ -1.55
SF3B1-212ENST00000496458 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-212ENST00000496458 AASSQ9UDR5 926 aa5.36□□□□□ -1.55
SF3B1-212ENST00000496458 GREB1LQ9C091 1923 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-212ENST00000496458 KIF26BQ2KJY2 2108 aa5.35□□□□□ -1.55
SF3B1-212ENST00000496458 LIPT2A6NK58 231 aa5.35□□□□□ -1.55
SF3B1-212ENST00000496458 PMS2P5A8MQ11 134 aa5.35□□□□□ -1.55
SF3B1-212ENST00000496458 PLPP2O43688 288 aa5.35□□□□□ -1.55
SF3B1-212ENST00000496458 ZG16O60844 167 aa5.35□□□□□ -1.55
SF3B1-212ENST00000496458 CTSVO60911 334 aa5.35□□□□□ -1.55
SF3B1-212ENST00000496458 DAB1O75553 588 aa5.35□□□□□ -1.55
SF3B1-212ENST00000496458 CSF2RAP15509 400 aa5.35□□□□□ -1.55
SF3B1-212ENST00000496458 PAX1P15863 534 aa5.35□□□□□ -1.55
SF3B1-212ENST00000496458 GM2AP17900 193 aa5.35□□□□□ -1.55
SF3B1-212ENST00000496458 Q75L30 129 aa5.35□□□□□ -1.55
SF3B1-212ENST00000496458 DGLUCYQ7Z3D6 616 aa5.35□□□□□ -1.55
SF3B1-212ENST00000496458 PIWIL4Q7Z3Z4 852 aaKnown RBP5.35□□□□□ -1.55
SF3B1-212ENST00000496458 PCGF5Q86SE9 256 aa5.35□□□□□ -1.55
SF3B1-212ENST00000496458 OR10V1Q8NGI7 309 aa5.35□□□□□ -1.55
SF3B1-212ENST00000496458 PPP4R1Q8TF05 950 aa5.35□□□□□ -1.55
SF3B1-212ENST00000496458 OXNAD1Q96HP4 312 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-212ENST00000496458 NEUROD6Q96NK8 337 aa5.35□□□□□ -1.55
SF3B1-212ENST00000496458 TRPC7Q9HCX4 862 aa5.35□□□□□ -1.55
SF3B1-212ENST00000496458 BUD23O43709 281 aaKnown RBP5.34□□□□□ -1.55
SF3B1-212ENST00000496458 MBD4O95243 580 aa5.34□□□□□ -1.55
SF3B1-212ENST00000496458 ANXA7P20073 488 aaKnown RBP5.34□□□□□ -1.55
SF3B1-212ENST00000496458 MCCP23508 829 aa5.34□□□□□ -1.55
SF3B1-212ENST00000496458 MLLT10P55197 1068 aa5.34□□□□□ -1.55
SF3B1-212ENST00000496458 ZSCAN23Q3MJ62 389 aa5.34□□□□□ -1.55
SF3B1-212ENST00000496458 CEP85LQ5SZL2 805 aa5.34□□□□□ -1.55
SF3B1-212ENST00000496458 GKAP1Q5VSY0 366 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-212ENST00000496458 ACSM2BQ68CK6 577 aa5.34□□□□□ -1.55
SF3B1-212ENST00000496458 GBGT1Q8N5D6 347 aa5.34□□□□□ -1.55
SF3B1-212ENST00000496458 SLC5A8Q8N695 610 aa5.34□□□□□ -1.55
SF3B1-212ENST00000496458 CNBD1Q8NA66 436 aa5.34□□□□□ -1.55
SF3B1-212ENST00000496458 SLC38A9Q8NBW4 561 aa5.34□□□□□ -1.55
SF3B1-212ENST00000496458 ELMOD3Q96FG2 381 aa5.34□□□□□ -1.55
SF3B1-212ENST00000496458 STAMBPL1Q96FJ0 436 aa5.34□□□□□ -1.55
SF3B1-212ENST00000496458 TMEM39BQ9GZU3 492 aa5.34□□□□□ -1.55
SF3B1-212ENST00000496458 ZNF696Q9H7X3 374 aa5.34□□□□□ -1.55
SF3B1-212ENST00000496458 OLA1Q9NTK5 396 aaKnown RBP5.34□□□□□ -1.55
SF3B1-212ENST00000496458 CORO1CQ9ULV4 474 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-212ENST00000496458 MTMR6Q9Y217 621 aa5.34□□□□□ -1.55
SF3B1-212ENST00000496458 B3GALT5Q9Y2C3 310 aa5.34□□□□□ -1.55
SF3B1-212ENST00000496458 C5orf60A6NFR6 353 aa5.33□□□□□ -1.56
SF3B1-212ENST00000496458 CYSRT1A8MQ03 144 aa5.33□□□□□ -1.56
SF3B1-212ENST00000496458 ANKRD66B4E2M5 251 aa5.33□□□□□ -1.56
SF3B1-212ENST00000496458 PRKNO60260 465 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-212ENST00000496458 RNASEH2AO75792 299 aaKnown RBP5.33□□□□□ -1.56
SF3B1-212ENST00000496458 WISP2O76076 250 aa5.33□□□□□ -1.56
SF3B1-212ENST00000496458 PDE9AO76083 593 aa5.33□□□□□ -1.56
SF3B1-212ENST00000496458 BAG4O95429 457 aaKnown RBP5.33□□□□□ -1.56
SF3B1-212ENST00000496458 KRT19P08727 400 aa5.33□□□□□ -1.56
SF3B1-212ENST00000496458 CHMP24386 653 aa5.33□□□□□ -1.56
SF3B1-212ENST00000496458 MAN1A1P33908 653 aa5.33□□□□□ -1.56
SF3B1-212ENST00000496458 DCTP40126 519 aa5.33□□□□□ -1.56
SF3B1-212ENST00000496458 CD81P60033 236 aa5.33□□□□□ -1.56
SF3B1-212ENST00000496458 EIF4A2Q14240 407 aaKnown RBP5.33□□□□□ -1.56
SF3B1-212ENST00000496458 KRT32Q14532 448 aa5.33□□□□□ -1.56
SF3B1-212ENST00000496458 HAUS3Q68CZ6 603 aa5.33□□□□□ -1.56
SF3B1-212ENST00000496458 SLC35E4Q6ICL7 350 aa5.33□□□□□ -1.56
SF3B1-212ENST00000496458 SLC27A1Q6PCB7 646 aa5.33□□□□□ -1.56
SF3B1-212ENST00000496458 PLXDC2Q6UX71 529 aa5.33□□□□□ -1.56
SF3B1-212ENST00000496458 CEACAM20Q6UY09 585 aa5.33□□□□□ -1.56
SF3B1-212ENST00000496458 TSPAN33Q86UF1 283 aa5.33□□□□□ -1.56
SF3B1-212ENST00000496458 LONP2Q86WA8 852 aa5.33□□□□□ -1.56
SF3B1-212ENST00000496458 PAF1Q8N7H5 531 aa5.33□□□□□ -1.56
SF3B1-212ENST00000496458 HJURPQ8NCD3 748 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-212ENST00000496458 TM9SF4Q92544 642 aa5.33□□□□□ -1.56
SF3B1-212ENST00000496458 ZNF524Q96C55 264 aa5.33□□□□□ -1.56
SF3B1-212ENST00000496458 ABHD8Q96I13 439 aa5.33□□□□□ -1.56
SF3B1-212ENST00000496458 MUC13Q9H3R2 512 aa5.33□□□□□ -1.56
SF3B1-212ENST00000496458 SETD4Q9NVD3 440 aa5.33□□□□□ -1.56
SF3B1-212ENST00000496458 DDX43Q9NXZ2 648 aaKnown RBP5.33□□□□□ -1.56
SF3B1-212ENST00000496458 PRAG1Q86YV5 1406 aa5.32□□□□□ -1.56
SF3B1-212ENST00000496458 SCAMP1O15126 338 aa5.32□□□□□ -1.56
SF3B1-212ENST00000496458 OGG1O15527 345 aa5.32□□□□□ -1.56
SF3B1-212ENST00000496458 EPB41L2O43491 1005 aaKnown RBP5.32□□□□□ -1.56
SF3B1-212ENST00000496458 EDIL3O43854 480 aa5.32□□□□□ -1.56
SF3B1-212ENST00000496458 HIST1H2ABP04908 130 aa5.32□□□□□ -1.56
SF3B1-212ENST00000496458 CDH2P19022 906 aaPredicted RBP5.32□□□□□ -1.56
SF3B1-212ENST00000496458 HIST1H2ADP20671 130 aa5.32□□□□□ -1.56
SF3B1-212ENST00000496458 PTMSP20962 102 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms