RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 BNIP2Q12982 314 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 TLR1Q15399 786 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 XKR7Q5GH72 579 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 TXNDC8Q6A555 127 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 PTRHD1Q6GMV3 140 aaKnown RBP10.96□□□□□ -0.66
CMSS1-208ENST00000496116 CYP2R1Q6VVX0 501 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 ARPINQ7Z6K5 226 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 RBFAQ8N0V3 343 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 OR2T34Q8NGX1 318 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 OR2T3Q8NH03 318 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 DDI1Q8WTU0 396 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 PIH1D2Q8WWB5 315 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 ZUFSPQ96AP4 578 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 SLC22A12Q96S37 553 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 ZNF382Q96SR6 550 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 SLC39A3Q9BRY0 314 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 TM6SF2Q9BZW4 377 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 IL1RL2Q9HB29 575 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 PAK6Q9NQU5 681 aaPredicted RBP10.96□□□□□ -0.66
CMSS1-208ENST00000496116 AIG1Q9NVV5 245 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 MAP10Q9P2G4 905 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 GNPTGQ9UJJ9 305 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 APPL1Q9UKG1 709 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 ZNF510Q9Y2H8 683 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 TRIM17Q9Y577 477 aa10.96□□□□□ -0.66
CMSS1-208ENST00000496116 A0A1W2PP18 115 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 IQCF5A8MTL0 148 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 GFRA2O00451 464 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 GREM1O60565 184 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 SOCS5O75159 536 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 PRAMEF1O95521 474 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 MYCP01106 439 aaPredicted RBP10.95□□□□□ -0.66
CMSS1-208ENST00000496116 ALPIP09923 528 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 HSD17B1P14061 328 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 LAG3P18627 525 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 ITGALP20701 1170 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 PRDX3P30048 256 aaKnown RBP10.95□□□□□ -0.66
CMSS1-208ENST00000496116 ARL1P40616 181 aaPredicted RBP10.95□□□□□ -0.66
CMSS1-208ENST00000496116 ERVK-8P63133 956 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 ECT2LQ008S8 904 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 PTPRRQ15256 657 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 PCBP2Q15366 365 aaKnown RBP eCLIP10.95□□□□□ -0.668e-7■■■□□ 18.5
CMSS1-208ENST00000496116 LYPLAL1Q5VWZ2 237 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 SLC39A5Q6ZMH5 540 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 SNX20Q7Z614 316 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 CAMK1DQ8IU85 385 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 FAM217AQ8IXS0 508 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 PHC3Q8NDX5 983 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 ADAMTS19Q8TE59 1207 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 LRRC58Q96CX6 371 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 ALG14Q96F25 216 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 TOX2Q96NM4 488 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 TRIM54Q9BYV2 358 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 BRINP2Q9C0B6 783 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 TMEM45AQ9NWC5 275 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 SPG21Q9NZD8 308 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 SUN2Q9UH99 717 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 EIF2B4Q9UI10 523 aaKnown RBP10.95□□□□□ -0.66
CMSS1-208ENST00000496116 ZNF225Q9UK10 706 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 OGDHLQ9ULD0 1010 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 SNX13Q9Y5W8 968 aa10.95□□□□□ -0.66
CMSS1-208ENST00000496116 A0A0U1RQS6 177 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 C1orf232A0A0U1RR37 186 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 AQP12BA6NM10 295 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 NME4O00746 187 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 RAD51BO15315 384 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 SLC22A3O75751 556 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 OR4F21O95013 312 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 TRBC1P01850 177 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 GRIA3P42263 894 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 CSNK1DP48730 415 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 DIO3P55073 304 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 RCAN2Q14206 197 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 INPP5AQ14642 412 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 LIN52Q52LA3 116 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 ATP6AP1LQ52LC2 224 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 PDCD4Q53EL6 469 aaKnown RBP10.94□□□□□ -0.66
CMSS1-208ENST00000496116 FAM151BQ6UXP7 276 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 DDX53Q86TM3 631 aaKnown RBP10.94□□□□□ -0.66
CMSS1-208ENST00000496116 SERPINA9Q86WD7 417 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 AQP12AQ8IXF9 295 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 MYO1HQ8N1T3 1032 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 GALNT4Q8N4A0 578 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 CHCHD4Q8N4Q1 142 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 GOLM1Q8NBJ4 401 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 TTC16Q8NEE8 873 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 WFDC5Q8TCV5 224 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 LRTOMTQ8WZ04 291 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 MRPS31Q92665 395 aaKnown RBP10.94□□□□□ -0.66
CMSS1-208ENST00000496116 BHMTQ93088 406 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 ESAMQ96AP7 390 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 PPWD1Q96BP3 646 aaKnown RBP10.94□□□□□ -0.66
CMSS1-208ENST00000496116 ZNF689Q96CS4 500 aaPredicted RBP10.94□□□□□ -0.66
CMSS1-208ENST00000496116 EID2BQ96D98 161 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 CIPCQ9C0C6 399 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 ASB8Q9H765 288 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 ZNF334Q9HCZ1 680 aaPredicted RBP10.94□□□□□ -0.66
CMSS1-208ENST00000496116 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.94□□□□□ -0.66
CMSS1-208ENST00000496116 ARMC1Q9NVT9 282 aa10.94□□□□□ -0.66
CMSS1-208ENST00000496116 ZIM2Q9NZV7 527 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms