RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 SPACA3Q8IXA5 215 aa17.04■□□□□ 0.32
CTNS-207ENST00000495445 DDHD1Q8NEL9 900 aa17.04■□□□□ 0.32
CTNS-207ENST00000495445 TBL1YQ9BQ87 522 aa17.04■□□□□ 0.32
CTNS-207ENST00000495445 APOL2Q9BQE5 337 aa17.04■□□□□ 0.32
CTNS-207ENST00000495445 NUDT22Q9BRQ3 303 aa17.04■□□□□ 0.32
CTNS-207ENST00000495445 FRMD8P1Q9BZ68 369 aaPredicted RBP17.04■□□□□ 0.32
CTNS-207ENST00000495445 RDH14Q9HBH5 336 aa17.04■□□□□ 0.32
CTNS-207ENST00000495445 EPB41L5Q9HCM4 733 aa17.04■□□□□ 0.32
CTNS-207ENST00000495445 WASH6PQ9NQA3 447 aa17.04■□□□□ 0.32
CTNS-207ENST00000495445 PRDM8Q9NQV8 689 aa17.04■□□□□ 0.32
CTNS-207ENST00000495445 SMOXQ9NWM0 555 aa17.04■□□□□ 0.32
CTNS-207ENST00000495445 FEZ2Q9UHY8 353 aaPredicted RBP17.04■□□□□ 0.32
CTNS-207ENST00000495445 PCDHGA7Q9Y5G6 932 aa17.04■□□□□ 0.32
CTNS-207ENST00000495445 IGHV5-10-1A0A0J9YXX1 117 aa17.03■□□□□ 0.32
CTNS-207ENST00000495445 C2orf81A6NN90 581 aa17.03■□□□□ 0.32
CTNS-207ENST00000495445 KCNJ13O60928 360 aa17.03■□□□□ 0.32
CTNS-207ENST00000495445 SLC2A4P14672 509 aa17.03■□□□□ 0.32
CTNS-207ENST00000495445 STIP1P31948 543 aaKnown RBP17.03■□□□□ 0.32
CTNS-207ENST00000495445 ABCG1P45844 678 aa17.03■□□□□ 0.32
CTNS-207ENST00000495445 LIMK2P53671 638 aa17.03■□□□□ 0.32
CTNS-207ENST00000495445 UBE2IP63279 158 aaKnown RBP17.03■□□□□ 0.32
CTNS-207ENST00000495445 GPLD1P80108 840 aa17.03■□□□□ 0.32
CTNS-207ENST00000495445 CCZ1BP86790 482 aa17.03■□□□□ 0.32
CTNS-207ENST00000495445 CCZ1P86791 482 aaPredicted RBP17.03■□□□□ 0.32
CTNS-207ENST00000495445 XIAPP98170 497 aa17.03■□□□□ 0.32
CTNS-207ENST00000495445 TLE3Q04726 772 aa17.03■□□□□ 0.32
CTNS-207ENST00000495445 ITGA9Q13797 1035 aa17.03■□□□□ 0.32
CTNS-207ENST00000495445 SPARCL1Q14515 664 aa17.03■□□□□ 0.32
CTNS-207ENST00000495445 LDLRAP1Q5SW96 308 aa17.03■□□□□ 0.32
CTNS-207ENST00000495445 NKAIN2Q5VXU1 208 aa17.03■□□□□ 0.32
CTNS-207ENST00000495445 ABRAXAS1Q6UWZ7 409 aa17.03■□□□□ 0.32
CTNS-207ENST00000495445 FAM151BQ6UXP7 276 aa17.03■□□□□ 0.32
CTNS-207ENST00000495445 SLC13A5Q86YT5 568 aaPredicted RBP17.03■□□□□ 0.32
CTNS-207ENST00000495445 OR4K2Q8NGD2 314 aa17.03■□□□□ 0.32
CTNS-207ENST00000495445 OR4D9Q8NGE8 314 aa17.03■□□□□ 0.32
CTNS-207ENST00000495445 ZNF398Q8TD17 642 aa17.03■□□□□ 0.32
CTNS-207ENST00000495445 DPYSL5Q9BPU6 564 aa17.03■□□□□ 0.32
CTNS-207ENST00000495445 TMEM121Q9BTD3 319 aa17.03■□□□□ 0.32
CTNS-207ENST00000495445 DPH1Q9BZG8 443 aa17.03■□□□□ 0.32
CTNS-207ENST00000495445 PRORYQ9H606 182 aa17.03■□□□□ 0.32
CTNS-207ENST00000495445 SCHIP1Q9P0W5 487 aaPredicted RBP17.03■□□□□ 0.32
CTNS-207ENST00000495445 ACSL6Q9UKU0 697 aa17.03■□□□□ 0.32
CTNS-207ENST00000495445 KCTD3Q9Y597 815 aa17.03■□□□□ 0.32
CTNS-207ENST00000495445 DNMT3AQ9Y6K1 912 aaPredicted RBP17.03■□□□□ 0.32
CTNS-207ENST00000495445 IGSF10Q6WRI0 2623 aa17.02■□□□□ 0.32
CTNS-207ENST00000495445 SMG1Q96Q15 3661 aaKnown RBP17.02■□□□□ 0.32
CTNS-207ENST00000495445 NVLO15381 856 aaKnown RBP17.02■□□□□ 0.32
CTNS-207ENST00000495445 GPR39O43194 453 aa17.02■□□□□ 0.32
CTNS-207ENST00000495445 LDB2O43679 373 aa17.02■□□□□ 0.32
CTNS-207ENST00000495445 PTMAP06454 111 aaKnown RBP17.02■□□□□ 0.32
CTNS-207ENST00000495445 PDE1BQ01064 536 aa17.02■□□□□ 0.32
CTNS-207ENST00000495445 HHEXQ03014 270 aa17.02■□□□□ 0.32
CTNS-207ENST00000495445 CCDC173Q0VFZ6 552 aa17.02■□□□□ 0.32
CTNS-207ENST00000495445 TRA2AQ13595 282 aaKnown RBP eCLIP17.02■□□□□ 0.32
CTNS-207ENST00000495445 GPRC6AQ5T6X5 926 aa17.02■□□□□ 0.32
CTNS-207ENST00000495445 AGAP9Q5VTM2 703 aa17.02■□□□□ 0.32
CTNS-207ENST00000495445 TMEM71Q6P5X7 295 aa17.02■□□□□ 0.32
CTNS-207ENST00000495445 CRTC3Q6UUV7 619 aa17.02■□□□□ 0.32
CTNS-207ENST00000495445 ARHGEF18Q6ZSZ5 1173 aa17.02■□□□□ 0.32
CTNS-207ENST00000495445 SLC9B2Q86UD5 537 aa17.02■□□□□ 0.32
CTNS-207ENST00000495445 PDZD3Q86UT5 571 aa17.02■□□□□ 0.32
CTNS-207ENST00000495445 RASGEF1AQ8N9B8 481 aa17.02■□□□□ 0.32
CTNS-207ENST00000495445 SH3KBP1Q96B97 665 aa17.02■□□□□ 0.32
CTNS-207ENST00000495445 CRELD1Q96HD1 420 aa17.02■□□□□ 0.32
CTNS-207ENST00000495445 B3GNT4Q9C0J1 378 aa17.02■□□□□ 0.32
CTNS-207ENST00000495445 UCK1Q9HA47 277 aa17.02■□□□□ 0.32
CTNS-207ENST00000495445 KCNK4Q9NYG8 393 aa17.02■□□□□ 0.32
CTNS-207ENST00000495445 ZNF624Q9P2J8 865 aaPredicted RBP17.02■□□□□ 0.32
CTNS-207ENST00000495445 CPNE7Q9UBL6 633 aa17.02■□□□□ 0.32
CTNS-207ENST00000495445 LOXL2Q9Y4K0 774 aa17.02■□□□□ 0.32
CTNS-207ENST00000495445 HGSO14964 777 aaPredicted RBP17.01■□□□□ 0.31
CTNS-207ENST00000495445 PSMD3O43242 534 aa17.01■□□□□ 0.31
CTNS-207ENST00000495445 LIASO43766 372 aa17.01■□□□□ 0.31
CTNS-207ENST00000495445 SNX2O60749 519 aa17.01■□□□□ 0.31
CTNS-207ENST00000495445 CRTAMO95727 393 aa17.01■□□□□ 0.31
CTNS-207ENST00000495445 CCDC175P0C221 793 aa17.01■□□□□ 0.31
CTNS-207ENST00000495445 HGFP14210 728 aa17.01■□□□□ 0.31
CTNS-207ENST00000495445 BRAFP15056 766 aa17.01■□□□□ 0.31
CTNS-207ENST00000495445 PSMA3P25788 255 aa17.01■□□□□ 0.31
CTNS-207ENST00000495445 CSF2RBP32927 897 aa17.01■□□□□ 0.31
CTNS-207ENST00000495445 SLC19A1P41440 591 aa17.01■□□□□ 0.31
CTNS-207ENST00000495445 ZNF140P52738 457 aaPredicted RBP17.01■□□□□ 0.31
CTNS-207ENST00000495445 EPHA4P54764 986 aa17.01■□□□□ 0.31
CTNS-207ENST00000495445 DMPKQ09013 629 aa17.01■□□□□ 0.31
CTNS-207ENST00000495445 BIRC2Q13490 618 aa17.01■□□□□ 0.31
CTNS-207ENST00000495445 C16orf72Q14CZ0 275 aa17.01■□□□□ 0.31
CTNS-207ENST00000495445 RPS6KA1Q15418 735 aa17.01■□□□□ 0.31
CTNS-207ENST00000495445 INSCQ1MX18 579 aa17.01■□□□□ 0.31
CTNS-207ENST00000495445 P3H1Q32P28 736 aa17.01■□□□□ 0.31
CTNS-207ENST00000495445 MAP9Q49MG5 647 aa17.01■□□□□ 0.31
CTNS-207ENST00000495445 SEL1L2Q5TEA6 688 aa17.01■□□□□ 0.31
CTNS-207ENST00000495445 FOXR1Q6PIV2 292 aa17.01■□□□□ 0.31
CTNS-207ENST00000495445 WDR74Q6RFH5 385 aaPredicted RBP17.01■□□□□ 0.31
CTNS-207ENST00000495445 AVL9Q8NBF6 648 aa17.01■□□□□ 0.31
CTNS-207ENST00000495445 SLC38A3Q99624 504 aa17.01■□□□□ 0.31
CTNS-207ENST00000495445 CMKLR1Q99788 373 aa17.01■□□□□ 0.31
CTNS-207ENST00000495445 PTPRQQ9UMZ3 2332 aa17.01■□□□□ 0.31
CTNS-207ENST00000495445 SRP72O76094 671 aaKnown RBP17■□□□□ 0.31
CTNS-207ENST00000495445 AP2A1O95782 977 aa17■□□□□ 0.31
CTNS-207ENST00000495445 SLC5A2P31639 672 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms