RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 FEZ2Q9UHY8 353 aaPredicted RBP8.68□□□□□ -1.02
ITGB1-217ENST00000494395 KLK13Q9UKR3 277 aa8.68□□□□□ -1.02
ITGB1-217ENST00000494395 SNX12Q9UMY4 172 aa8.68□□□□□ -1.02
ITGB1-217ENST00000494395 ZNF148Q9UQR1 794 aa8.68□□□□□ -1.02
ITGB1-217ENST00000494395 NEUROG3Q9Y4Z2 214 aa8.68□□□□□ -1.02
ITGB1-217ENST00000494395 KCTD3Q9Y597 815 aa8.68□□□□□ -1.02
ITGB1-217ENST00000494395 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.68□□□□□ -1.02
ITGB1-217ENST00000494395 A0A1W2PNR3 127 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 PRR19A6NJB7 356 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 ERI2A8K979 691 aaKnown RBP8.67□□□□□ -1.02
ITGB1-217ENST00000494395 CHUKO15111 745 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 PSMD3O43242 534 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 KIF5CO60282 957 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 IFNB1P01574 187 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 GP1BAP07359 652 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 ZNF16P17020 682 aaPredicted RBP8.67□□□□□ -1.02
ITGB1-217ENST00000494395 AK4P27144 223 aaPredicted RBP8.67□□□□□ -1.02
ITGB1-217ENST00000494395 SPAM1P38567 509 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 GRIA1P42261 906 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 TNNT3P45378 269 aaPredicted RBP8.67□□□□□ -1.02
ITGB1-217ENST00000494395 GNPDA1P46926 289 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 IDH3AP50213 366 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 CLDN6P56747 220 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 CTBSQ01459 385 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 TCEA2Q15560 299 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 CHRNA6Q15825 494 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 PERM1Q5SV97 790 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 ZDHHC20Q5W0Z9 365 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 DOK6Q6PKX4 331 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 DHRS13Q6UX07 377 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 TMPRSS7Q7RTY8 843 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 ADGRG6Q86SQ4 1221 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 PHYKPLQ8IUZ5 450 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 TAB3Q8N5C8 712 aaPredicted RBP8.67□□□□□ -1.02
ITGB1-217ENST00000494395 KYQ8NBH2 561 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 OR4K2Q8NGD2 314 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 OR13C4Q8NGS5 318 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 ACTRT1Q8TDG2 376 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 GATA6Q92908 595 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 DMRTB1Q96MA1 342 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 OR2M4Q96R27 311 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 RUBCNLQ9H714 662 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 TRIM39Q9HCM9 518 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 ARFGAP3Q9NP61 516 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 HOMER3Q9NSC5 361 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 SPATS2LQ9NUQ6 558 aaKnown RBP8.67□□□□□ -1.02
ITGB1-217ENST00000494395 SMOXQ9NWM0 555 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.67□□□□□ -1.027e-13■■■■□ 21.6
ITGB1-217ENST00000494395 NCKIPSDQ9NZQ3 722 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 PAK5Q9P286 719 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 ATXN10Q9UBB4 475 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 MOSPD1Q9UJG1 213 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 ANGPTL2Q9UKU9 493 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 GPR34Q9UPC5 381 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 NEU2Q9Y3R4 380 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 DYRK1BQ9Y463 629 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 PLEKHM1Q9Y4G2 1056 aa8.67□□□□□ -1.02
ITGB1-217ENST00000494395 TRBV5-4A0A0C4DH59 114 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 GLYATL1P3A0A0U1RQE8 302 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 A6NCN8 305 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 MROH6A6NGR9 719 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 GPR89AB7ZAQ6 455 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 H7C0S8 307 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 PGRMC1O00264 195 aaKnown RBP8.66□□□□□ -1.02
ITGB1-217ENST00000494395 ZNF185O15231 689 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 CASC3O15234 703 aaKnown RBP8.66□□□□□ -1.02
ITGB1-217ENST00000494395 STX7O15400 261 aaKnown RBP8.66□□□□□ -1.02
ITGB1-217ENST00000494395 NUAK1O60285 661 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 UGT1A9O60656 530 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 MTX2O75431 263 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 SLC25A14O95258 325 aaPredicted RBP8.66□□□□□ -1.02
ITGB1-217ENST00000494395 GPR89BP0CG08 455 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 CDK4P11802 303 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 ZNF8P17098 575 aaPredicted RBP8.66□□□□□ -1.02
ITGB1-217ENST00000494395 UGT1A6P19224 532 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 UGT1A1P22309 533 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 UGT1A4P22310 534 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 MSNP26038 577 aaKnown RBP8.66□□□□□ -1.02
ITGB1-217ENST00000494395 UGT1A3P35503 534 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 UGT1A5P35504 534 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 DUSP3P51452 185 aaPredicted RBP8.66□□□□□ -1.02
ITGB1-217ENST00000494395 DAB2P98082 770 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 INSM1Q01101 510 aaPredicted RBP8.66□□□□□ -1.02
ITGB1-217ENST00000494395 PEX6Q13608 980 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 HLTFQ14527 1009 aaKnown RBP eCLIP8.66□□□□□ -1.02
ITGB1-217ENST00000494395 NR0B2Q15466 257 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 KCTD19Q17RG1 926 aaPredicted RBP8.66□□□□□ -1.02
ITGB1-217ENST00000494395 HS1BP3Q53T59 392 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 ZNF648Q5T619 568 aaPredicted RBP8.66□□□□□ -1.02
ITGB1-217ENST00000494395 CDCP2Q5VXM1 449 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 PAPD7Q5XG87 772 aaKnown RBP8.66□□□□□ -1.02
ITGB1-217ENST00000494395 FAM151BQ6UXP7 276 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 C4orf22Q6V702 233 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 CCNI2Q6ZMN8 369 aaPredicted RBP8.66□□□□□ -1.02
ITGB1-217ENST00000494395 MICALCLQ6ZW33 695 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 MARK2Q7KZI7 788 aaKnown RBP8.66□□□□□ -1.02
ITGB1-217ENST00000494395 BTLAQ7Z6A9 289 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 TAF8Q7Z7C8 310 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 C11orf96Q7Z7L8 435 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 LINC00523Q86TU6 105 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms