RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 SAE1Q9UBE0 346 aaPredicted RBP23.53■■□□□ 1.36
TTC3-224ENST00000494243 HYOU1Q9Y4L1 999 aa23.53■■□□□ 1.36
TTC3-224ENST00000494243 POLR1CO15160 346 aaPredicted RBP23.52■■□□□ 1.36
TTC3-224ENST00000494243 VEGFDO43915 354 aa23.52■■□□□ 1.36
TTC3-224ENST00000494243 PMPCBO75439 489 aa23.52■■□□□ 1.36
TTC3-224ENST00000494243 DLGAP3O95886 979 aa23.52■■□□□ 1.36
TTC3-224ENST00000494243 BRAFP15056 766 aa23.52■■□□□ 1.36
TTC3-224ENST00000494243 POLE2P56282 527 aa23.52■■□□□ 1.36
TTC3-224ENST00000494243 PRKD1Q15139 912 aaPredicted RBP23.52■■□□□ 1.36
TTC3-224ENST00000494243 TCEAL1Q15170 157 aa23.52■■□□□ 1.36
TTC3-224ENST00000494243 TAZQ16635 292 aa23.52■■□□□ 1.36
TTC3-224ENST00000494243 INSCQ1MX18 579 aa23.52■■□□□ 1.36
TTC3-224ENST00000494243 ABRAXAS1Q6UWZ7 409 aa23.52■■□□□ 1.36
TTC3-224ENST00000494243 LRRTM4Q86VH4 590 aa23.52■■□□□ 1.36
TTC3-224ENST00000494243 C9orf72Q96LT7 481 aa23.52■■□□□ 1.36
TTC3-224ENST00000494243 TIMM29Q9BSF4 260 aa23.52■■□□□ 1.36
TTC3-224ENST00000494243 UBP1Q9NZI7 540 aa23.52■■□□□ 1.36
TTC3-224ENST00000494243 DNAJC16Q9Y2G8 782 aa23.52■■□□□ 1.36
TTC3-224ENST00000494243 A0A0A6YYK5 440 aaPredicted RBP23.51■■□□□ 1.35
TTC3-224ENST00000494243 CDK14O94921 469 aa23.51■■□□□ 1.35
TTC3-224ENST00000494243 VIPP01282 170 aa23.51■■□□□ 1.35
TTC3-224ENST00000494243 TYRP1P17643 537 aa23.51■■□□□ 1.35
TTC3-224ENST00000494243 CD68P34810 354 aaPredicted RBP23.51■■□□□ 1.35
TTC3-224ENST00000494243 ABHD18Q0P651 414 aa23.51■■□□□ 1.35
TTC3-224ENST00000494243 ATP13A5Q4VNC0 1218 aa23.51■■□□□ 1.35
TTC3-224ENST00000494243 C11orf96Q7Z7L8 435 aa23.51■■□□□ 1.35
TTC3-224ENST00000494243 VSTM4Q8IW00 320 aa23.51■■□□□ 1.35
TTC3-224ENST00000494243 RHOT1Q8IXI2 618 aa23.51■■□□□ 1.35
TTC3-224ENST00000494243 CCDC42Q96M95 316 aa23.51■■□□□ 1.35
TTC3-224ENST00000494243 CATSPER2Q96P56 530 aa23.51■■□□□ 1.35
TTC3-224ENST00000494243 VPS35Q96QK1 796 aa23.51■■□□□ 1.35
TTC3-224ENST00000494243 BPIFA1Q9NP55 256 aa23.51■■□□□ 1.35
TTC3-224ENST00000494243 DDX56Q9NY93 547 aaKnown RBP23.51■■□□□ 1.35
TTC3-224ENST00000494243 SPTA1P02549 2419 aa23.5■■□□□ 1.35
TTC3-224ENST00000494243 UBXN7O94888 489 aa23.5■■□□□ 1.35
TTC3-224ENST00000494243 TNNT1P13805 278 aa23.5■■□□□ 1.35
TTC3-224ENST00000494243 CDKN2BP42772 138 aa23.5■■□□□ 1.35
TTC3-224ENST00000494243 SLC1A1P43005 524 aa23.5■■□□□ 1.35
TTC3-224ENST00000494243 NR2C2P49116 596 aa23.5■■□□□ 1.35
TTC3-224ENST00000494243 WASHC5Q12768 1159 aa23.5■■□□□ 1.35
TTC3-224ENST00000494243 KCNAB2Q13303 367 aa23.5■■□□□ 1.35
TTC3-224ENST00000494243 SEPT7Q16181 437 aaKnown RBP23.5■■□□□ 1.35
TTC3-224ENST00000494243 CCDC70Q6NSX1 233 aa23.5■■□□□ 1.35
TTC3-224ENST00000494243 WASH2PQ6VEQ5 465 aa23.5■■□□□ 1.35
TTC3-224ENST00000494243 KIAA1143Q96AT1 154 aaPredicted RBP23.5■■□□□ 1.35
TTC3-224ENST00000494243 SRPK1Q96SB4 655 aaKnown RBP23.5■■□□□ 1.35
TTC3-224ENST00000494243 TRIT1Q9H3H1 467 aaKnown RBP23.5■■□□□ 1.35
TTC3-224ENST00000494243 SLC40A1Q9NP59 571 aa23.5■■□□□ 1.35
TTC3-224ENST00000494243 WASH6PQ9NQA3 447 aa23.5■■□□□ 1.35
TTC3-224ENST00000494243 TUBD1Q9UJT1 453 aa23.5■■□□□ 1.35
TTC3-224ENST00000494243 LOC285095A0A1B0GVY8 99 aa23.49■■□□□ 1.35
TTC3-224ENST00000494243 PDZK1P1A8MUH7 402 aa23.49■■□□□ 1.35
TTC3-224ENST00000494243 CBFA2T2O43439 604 aa23.49■■□□□ 1.35
TTC3-224ENST00000494243 MFAP3LO75121 409 aa23.49■■□□□ 1.35
TTC3-224ENST00000494243 PECAM1P16284 738 aaPredicted RBP23.49■■□□□ 1.35
TTC3-224ENST00000494243 COMTP21964 271 aa23.49■■□□□ 1.35
TTC3-224ENST00000494243 RPL10P27635 214 aaKnown RBP23.49■■□□□ 1.35
TTC3-224ENST00000494243 HMGCLP35914 325 aa23.49■■□□□ 1.35
TTC3-224ENST00000494243 CCR10P46092 362 aa23.49■■□□□ 1.35
TTC3-224ENST00000494243 LEPRP48357 1165 aaKnown RBP23.49■■□□□ 1.35
TTC3-224ENST00000494243 TMEM115Q12893 351 aaPredicted RBP23.49■■□□□ 1.35
TTC3-224ENST00000494243 NOMO1Q15155 1222 aa23.49■■□□□ 1.35
TTC3-224ENST00000494243 AGAP9Q5VTM2 703 aa23.49■■□□□ 1.35
TTC3-224ENST00000494243 KDELC1Q6UW63 502 aa23.49■■□□□ 1.35
TTC3-224ENST00000494243 TRIM48Q8IWZ4 208 aa23.49■■□□□ 1.35
TTC3-224ENST00000494243 TTC30BQ8N4P2 665 aa23.49■■□□□ 1.35
TTC3-224ENST00000494243 TGM7Q96PF1 710 aa23.49■■□□□ 1.35
TTC3-224ENST00000494243 OR52A4PA6NMU1 304 aa23.48■■□□□ 1.35
TTC3-224ENST00000494243 TOX3O15405 576 aaPredicted RBP23.48■■□□□ 1.35
TTC3-224ENST00000494243 PRKAR1AP10644 381 aa23.48■■□□□ 1.35
TTC3-224ENST00000494243 ZNF28P17035 718 aa23.48■■□□□ 1.35
TTC3-224ENST00000494243 AMD1P17707 334 aa23.48■■□□□ 1.35
TTC3-224ENST00000494243 STAT5AP42229 794 aa23.48■■□□□ 1.35
TTC3-224ENST00000494243 DRG2P55039 364 aaKnown RBP23.48■■□□□ 1.35
TTC3-224ENST00000494243 WNT3AP56704 352 aa23.48■■□□□ 1.35
TTC3-224ENST00000494243 ADCY2Q08462 1091 aa23.48■■□□□ 1.35
TTC3-224ENST00000494243 CDC20Q12834 499 aa23.48■■□□□ 1.35
TTC3-224ENST00000494243 MAP7Q14244 749 aa23.48■■□□□ 1.35
TTC3-224ENST00000494243 LLGL1Q15334 1064 aa23.48■■□□□ 1.35
TTC3-224ENST00000494243 TFB1MQ8WVM0 346 aaKnown RBP23.48■■□□□ 1.35
TTC3-224ENST00000494243 EFHD1Q9BUP0 239 aa23.48■■□□□ 1.35
TTC3-224ENST00000494243 IL26Q9NPH9 171 aa23.48■■□□□ 1.35
TTC3-224ENST00000494243 POT1Q9NUX5 634 aa23.48■■□□□ 1.35
TTC3-224ENST00000494243 FAM153AQ9UHL3 310 aa23.48■■□□□ 1.35
TTC3-224ENST00000494243 INTUQ9ULD6 942 aa23.48■■□□□ 1.35
TTC3-224ENST00000494243 WDR37Q9Y2I8 494 aa23.48■■□□□ 1.35
TTC3-224ENST00000494243 BSNQ9UPA5 3926 aa23.48■■□□□ 1.35
TTC3-224ENST00000494243 CST8O60676 142 aa23.47■■□□□ 1.35
TTC3-224ENST00000494243 NFKB1P19838 968 aa23.47■■□□□ 1.35
TTC3-224ENST00000494243 IDSP22304 550 aa23.47■■□□□ 1.35
TTC3-224ENST00000494243 F8A1P23610 371 aa23.47■■□□□ 1.35
TTC3-224ENST00000494243 OAS2P29728 719 aaKnown RBP23.47■■□□□ 1.35
TTC3-224ENST00000494243 SH3BP2P78314 561 aa23.47■■□□□ 1.35
TTC3-224ENST00000494243 FOXM1Q08050 763 aa23.47■■□□□ 1.35
TTC3-224ENST00000494243 TFDP2Q14188 446 aa23.47■■□□□ 1.35
TTC3-224ENST00000494243 GPR18Q14330 331 aa23.47■■□□□ 1.35
TTC3-224ENST00000494243 ODF2Q5BJF6 829 aa23.47■■□□□ 1.35
TTC3-224ENST00000494243 SIRPB2Q5JXA9 342 aa23.47■■□□□ 1.35
TTC3-224ENST00000494243 BZW1Q7L1Q6 419 aaKnown RBP23.47■■□□□ 1.35
TTC3-224ENST00000494243 PTRH1Q86Y79 214 aaKnown RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms