RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 TOX3O15405 576 aaPredicted RBP10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 MTX2O75431 263 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 RASSF9O75901 435 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 TMEM253P0C7T8 217 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 TNNT1P13805 278 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 ZNF7P17097 686 aaPredicted RBP10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 AMD1P17707 334 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 TCN2P20062 427 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 SLC19A1P41440 591 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 SEPHS1P49903 392 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 MC1RQ01726 317 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 CDK18Q07002 472 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 MAP7Q14244 749 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 PDK1Q15118 436 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 SKIDA1Q1XH10 827 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 ASTE1Q2TB18 679 aaPredicted RBP10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 DEFB109BQ30KR1 87 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 ODF2Q5BJF6 829 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 SLC9A4Q6AI14 798 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 CCDC70Q6NSX1 233 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 C16orf46Q6P387 395 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 NPNTQ6UXI9 565 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 TMEM26Q6ZUK4 368 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 B4GALNT4Q76KP1 1039 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 TMC3Q7Z5M5 1100 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 ESX1Q8N693 406 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 SPATA22Q8NHS9 363 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 APOBEC4Q8WW27 367 aaKnown RBP10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 RNF31Q96EP0 1072 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 TGM7Q96PF1 710 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 OR6C1Q96RD1 312 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 TIMM29Q9BSF4 260 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 SLC25A51Q9H1U9 297 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 ZNF71Q9NQZ8 489 aaPredicted RBP10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 ZNHIT6Q9NWK9 470 aaKnown RBP10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 ZNF624Q9P2J8 865 aaPredicted RBP10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 ANAPC2Q9UJX6 822 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 MRPS18BQ9Y676 258 aaKnown RBP10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 SLC30A1Q9Y6M5 507 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 RPS6KL1Q9Y6S9 549 aa10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 PRRC2CQ9Y520 2896 aaKnown RBP10.11□□□□□ -0.79
NUDCD3-210ENST00000493613 C3orf70A6NLC5 250 aaPredicted RBP10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 VEGFDO43915 354 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 CDK14O94921 469 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 MT-CYBP00156 380 aaPredicted RBP10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 KRT1P04264 644 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 ZNF28P17035 718 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 BPIP17213 487 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 IDSP22304 550 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 RPL10P27635 214 aaKnown RBP10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 DLSTP36957 453 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 CASRP41180 1078 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 LEPRP48357 1165 aaKnown RBP10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 DRG2P55039 364 aaKnown RBP10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 DYNLT1P63172 113 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 SH3BP2P78314 561 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 SEPT6Q14141 434 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 GPR18Q14330 331 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 SLC14A2Q15849 920 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 KHDC1Q4VXA5 237 aaKnown RBP10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 CRTC2Q53ET0 693 aaPredicted RBP10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 COLEC12Q5KU26 742 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 ATP1A1-AS1Q5TC04 95 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 ABRAXAS1Q6UWZ7 409 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 VSIG1Q86XK7 387 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 RFX6Q8HWS3 928 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 RASGRP3Q8IV61 690 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 ZNF547Q8IVP9 402 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 RSC1A1Q92681 617 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 RNF25Q96BH1 459 aaPredicted RBP10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 TADA1Q96BN2 335 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 CXorf40BQ96DE9 158 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 ABHD17AQ96GS6 310 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 CCDC42Q96M95 316 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 OLFM3Q96PB7 478 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 VPS35Q96QK1 796 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 DNAJC7Q99615 494 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 ZNF768Q9H5H4 540 aaKnown RBP10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 SLC40A1Q9NP59 571 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 SPTLC3Q9NUV7 552 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 POT1Q9NUX5 634 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 PCDHB3Q9Y5E6 796 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 SPO11Q9Y5K1 396 aa10.1□□□□□ -0.79
NUDCD3-210ENST00000493613 A0A0A6YYK5 440 aaPredicted RBP10.09□□□□□ -0.79
NUDCD3-210ENST00000493613 SSU72P8A0A1W2PR75 194 aa10.09□□□□□ -0.79
NUDCD3-210ENST00000493613 PRR19A6NJB7 356 aa10.09□□□□□ -0.79
NUDCD3-210ENST00000493613 OR52A4PA6NMU1 304 aa10.09□□□□□ -0.79
NUDCD3-210ENST00000493613 AURKAO14965 403 aa10.09□□□□□ -0.79
NUDCD3-210ENST00000493613 KIF1CO43896 1103 aaKnown RBP10.09□□□□□ -0.79
NUDCD3-210ENST00000493613 PMPCBO75439 489 aa10.09□□□□□ -0.79
NUDCD3-210ENST00000493613 NDST3O95803 873 aa10.09□□□□□ -0.79
NUDCD3-210ENST00000493613 BRAFP15056 766 aa10.09□□□□□ -0.79
NUDCD3-210ENST00000493613 ZFXP17010 805 aaPredicted RBP10.09□□□□□ -0.79
NUDCD3-210ENST00000493613 VCLP18206 1134 aa10.09□□□□□ -0.79
NUDCD3-210ENST00000493613 F8A1P23610 371 aa10.09□□□□□ -0.79
NUDCD3-210ENST00000493613 ARHGAP25P42331 645 aa10.09□□□□□ -0.79
NUDCD3-210ENST00000493613 HALP42357 657 aa10.09□□□□□ -0.79
NUDCD3-210ENST00000493613 CAPZBP47756 277 aa10.09□□□□□ -0.79
NUDCD3-210ENST00000493613 TMEM115Q12893 351 aaPredicted RBP10.09□□□□□ -0.79
NUDCD3-210ENST00000493613 GTF2H3Q13889 308 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms