RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 HOOK3Q86VS8 718 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 GALNT13Q8IUC8 556 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 FSTL5Q8N475 847 aaPredicted RBP11.46□□□□□ -0.57
CTSA-209ENST00000493522 EID2Q8N6I1 236 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 MCUQ8NE86 351 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 MNS1Q8NEH6 495 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 ZNF398Q8TD17 642 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 ULK4Q96C45 1275 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 TBATAQ96M53 351 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 SERPINB12Q96P63 405 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 OR2M4Q96R27 311 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 ZCCHC2Q9C0B9 1178 aaKnown RBP11.46□□□□□ -0.57
CTSA-209ENST00000493522 NRSN2Q9GZP1 204 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 OR2AG1Q9H205 316 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 DPH5Q9H2P9 285 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 FAM96AQ9H5X1 160 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 UGT1A7Q9HAW7 530 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 UGT1A10Q9HAW8 530 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 UGT1A8Q9HAW9 530 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 SMOXQ9NWM0 555 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 SAMD15Q9P1V8 674 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 VPS18Q9P253 973 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 SLC2A6Q9UGQ3 507 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 DOLKQ9UPQ8 538 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 AK5Q9Y6K8 562 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 DGKBQ9Y6T7 804 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 CCDC162PA2VCL2 907 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 NEMP2A6NFY4 417 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 OR51F1A6NGY5 319 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 ANXA6P08133 673 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 ALPPL2P10696 532 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 MLNP12872 115 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 RPL21P46778 160 aaKnown RBP11.45□□□□□ -0.58
CTSA-209ENST00000493522 ARSDP51689 593 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 ITGA8P53708 1063 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 PRAMEP78395 509 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 XIAPP98170 497 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 TARDBPQ13148 414 aaKnown RBP eCLIP11.45□□□□□ -0.58
CTSA-209ENST00000493522 ILKQ13418 452 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 NFATC2Q13469 925 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 TUBB2AQ13885 445 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 MORF4L2Q15014 288 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 ELOCQ15369 112 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 DEFB133Q30KQ1 61 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 PLA2G4EQ3MJ16 856 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 KHDC1Q4VXA5 237 aaKnown RBP11.45□□□□□ -0.58
CTSA-209ENST00000493522 LDLRAP1Q5SW96 308 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 GPRC6AQ5T6X5 926 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 AFTPHQ6ULP2 937 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 CRTC3Q6UUV7 619 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 TAS2R42Q7RTR8 314 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 SNX20Q7Z614 316 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 CAND1Q86VP6 1230 aaKnown RBP11.45□□□□□ -0.58
CTSA-209ENST00000493522 GKN2Q86XP6 184 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 MPP5Q8N3R9 675 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 SLC25A45Q8N413 288 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 DDHD1Q8NEL9 900 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 OR13J1Q8NGT2 312 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 DTX3LQ8TDB6 740 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 SLC39A7Q92504 469 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.45□□□□□ -0.58
CTSA-209ENST00000493522 CDKN2AIPNLQ96HQ2 116 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 TTC25Q96NG3 672 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 C19orf43Q9BQ61 176 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 TUBB2BQ9BVA1 445 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 RAB17Q9H0T7 212 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 TMEM168Q9H0V1 697 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 TRIM39Q9HCM9 518 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 ATXN10Q9UBB4 475 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 ZNHIT2Q9UHR6 403 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 TMPRSS11EQ9UL52 423 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 RIMKLBQ9ULI2 386 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 SOX13Q9UN79 622 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 SNX24Q9Y343 169 aa11.45□□□□□ -0.58
CTSA-209ENST00000493522 CTAGE15A4D2H0 777 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 H7C0S8 307 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 NDC80O14777 642 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 ATXN7O15265 892 aaPredicted RBP11.44□□□□□ -0.58
CTSA-209ENST00000493522 TLX3O43711 291 aaPredicted RBP11.44□□□□□ -0.58
CTSA-209ENST00000493522 DNAJC6O75061 913 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 SEC31AO94979 1220 aaKnown RBP11.44□□□□□ -0.58
CTSA-209ENST00000493522 CTAGE8P0CG41 777 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 ZNF8P17098 575 aaPredicted RBP11.44□□□□□ -0.58
CTSA-209ENST00000493522 MSH3P20585 1137 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 IVDP26440 423 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 ITPKBP27987 946 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 NMBRP28336 390 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 CA5AP35218 305 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 CLDN6P56747 220 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 CACNG1Q06432 222 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 ILF3Q12906 894 aaKnown RBP eCLIP11.44□□□□□ -0.583e-8■■■□□ 16.1
CTSA-209ENST00000493522 CALCOCO2Q13137 446 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 RTP5Q14D33 572 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 DNAJC21Q5F1R6 531 aaKnown RBP11.44□□□□□ -0.58
CTSA-209ENST00000493522 DNTTIP2Q5QJE6 756 aaKnown RBP11.44□□□□□ -0.58
CTSA-209ENST00000493522 CES3Q6UWW8 571 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 TAF8Q7Z7C8 310 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 ADGRG6Q86SQ4 1221 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 CTAGE6Q86UF2 777 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 TRAPPC5Q8IUR0 188 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms