RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 PIRTP0C851 137 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 SFTPCP11686 197 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 MPSTP25325 297 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 SLC19A1P41440 591 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 WNT3AP56704 352 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 DMPKQ09013 629 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 XRCC4Q13426 336 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 BIRC2Q13490 618 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 MAP7Q14244 749 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 SLC1A5Q15758 541 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 PPP2R5EQ16537 467 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 ATP13A5Q4VNC0 1218 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 SIRPB2Q5JXA9 342 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 ZNF569Q5MCW4 686 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 ZFYVE27Q5T4F4 411 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 ZDHHC20Q5W0Z9 365 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 ANKS6Q68DC2 871 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 C11orf63Q6NUN7 778 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 TMEM26Q6ZUK4 368 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 BBS12Q6ZW61 710 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 B4GALNT4Q76KP1 1039 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 KDELC2Q7Z4H8 507 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 RFX6Q8HWS3 928 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 PLXDC1Q8IUK5 500 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 PHYKPLQ8IUZ5 450 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 RBM12BQ8IXT5 1001 aaKnown RBP8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 KLHDC8BQ8IXV7 354 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 CCDC170Q8IYT3 715 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 BRSK1Q8TDC3 778 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 OXNAD1Q96HP4 312 aaPredicted RBP8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 SLC45A3Q96JT2 553 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 C19orf43Q9BQ61 176 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 GORASP1Q9BQQ3 440 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 GPR63Q9BZJ6 419 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 SLC40A1Q9NP59 571 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 KLC4Q9NSK0 619 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 SMOXQ9NWM0 555 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 GEMIN8Q9NWZ8 242 aaKnown RBP8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 HACD3Q9P035 362 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 EPHA6Q9UF33 1036 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 TRHDEQ9UKU6 1024 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 DNMT3AQ9Y6K1 912 aaPredicted RBP8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 SLC30A1Q9Y6M5 507 aa8.25□□□□□ -1.09
SMARCB1-207ENST00000491967 AGAP14A8MT82 685 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 TERTO14746 1132 aaKnown RBP8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 SPOPO43791 374 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 CDK14O94921 469 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 DLGAP3O95886 979 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 LIFP15018 202 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 NFKB1P19838 968 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 MAP4P27816 1152 aaKnown RBP8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 CA5AP35218 305 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 PTPN7P35236 360 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 ADRA1AP35348 466 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 MAGEA1P43355 309 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 ATP1A2P50993 1020 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 COPS2P61201 443 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 DYNLT1P63172 113 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 TMEM115Q12893 351 aaPredicted RBP8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 MPP3Q13368 585 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 NFATC2Q13469 925 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 PCSK7Q16549 785 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 ALS2CLQ60I27 953 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 CCDC70Q6NSX1 233 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 RANBP10Q6VN20 620 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 TIPARPQ7Z3E1 657 aaKnown RBP8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 LRRTM4Q86VH4 590 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 ZNF567Q8N184 647 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 ZSCAN1Q8NBB4 408 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 DDHD1Q8NEL9 900 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 KLHL6Q8WZ60 621 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 NCSTNQ92542 709 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 P3H4Q92791 437 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 EXTL1Q92935 676 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 AHCYL2Q96HN2 611 aaKnown RBP8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 CALR3Q96L12 384 aaKnown RBP8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 C9orf72Q96LT7 481 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 QKIQ96PU8 341 aaKnown RBP eCLIP8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 TBC1D10AQ9BXI6 508 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 ADNPQ9H2P0 1102 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 STN1Q9H668 368 aaKnown RBP8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 ARFGAP3Q9NP61 516 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 POT1Q9NUX5 634 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 UBP1Q9NZI7 540 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 TUBD1Q9UJT1 453 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 WDR37Q9Y2I8 494 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 PCDHA13Q9Y5I0 950 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 PIKFYVEQ9Y2I7 2098 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 SPTBP11277 2137 aa8.24□□□□□ -1.09
SMARCB1-207ENST00000491967 UBR5O95071 2799 aaPredicted RBP8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 BTNL10A8MVZ5 291 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 APOC4-APOC2K7ER74 178 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 AGRPO00253 132 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 SUV39H1O43463 412 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 RAD1O60671 282 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 SNX2O60749 519 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 MTX2O75431 263 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 RECKO95980 971 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 APOC2P02655 101 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 HLA-DPA1P20036 260 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms