RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 MARCH4Q9P2E8 410 aaPredicted RBP9.75□□□□□ -0.85
ERCC3-208ENST00000491292 TRMT6Q9UJA5 497 aaKnown RBP9.75□□□□□ -0.85
ERCC3-208ENST00000491292 PKP3Q9Y446 797 aa9.75□□□□□ -0.85
ERCC3-208ENST00000491292 SMIM28A0A1B0GU29 152 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 CCRL2O00421 344 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 UBFD1O14562 309 aaKnown RBP9.74□□□□□ -0.85
ERCC3-208ENST00000491292 SEC22BO75396 215 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 B3GAT3O94766 335 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 CHRM5P08912 532 aaPredicted RBP9.74□□□□□ -0.85
ERCC3-208ENST00000491292 CD36P16671 472 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 HTR1BP28222 390 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 TGFBR1P36897 503 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 CDKN2DP55273 166 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 PAFAH1B3Q15102 231 aaKnown RBP9.74□□□□□ -0.85
ERCC3-208ENST00000491292 GRIK4Q16099 956 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 PTPRNQ16849 979 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 FAM214AQ32MH5 1076 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 SULT1C3Q6IMI6 304 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 FAM117BQ6P1L5 589 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 ENPP6Q6UWR7 440 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 ANKRD13BQ86YJ7 626 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 ARMC8Q8IUR7 673 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 PHACTR4Q8IZ21 702 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 PDPRQ8NCN5 879 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 OR13C4Q8NGS5 318 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 STON2Q8WXE9 905 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 ZUFSPQ96AP4 578 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 AURKBQ96GD4 344 aaPredicted RBP9.74□□□□□ -0.85
ERCC3-208ENST00000491292 COQ7Q99807 217 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 CHCHD6Q9BRQ6 235 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 KIFC1Q9BW19 673 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 BEX2Q9BXY8 128 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 EIF2B4Q9UI10 523 aaKnown RBP9.74□□□□□ -0.85
ERCC3-208ENST00000491292 TEKT2Q9UIF3 430 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 NOTOA8MTQ0 251 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 ADM5C9JUS6 153 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 DCLK1O15075 740 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 WDR47O94967 919 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 CPSF4O95639 269 aaKnown RBP9.74□□□□□ -0.85
ERCC3-208ENST00000491292 GPX3P22352 226 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 AQP1P29972 269 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 PRDX3P30048 256 aaKnown RBP9.74□□□□□ -0.85
ERCC3-208ENST00000491292 MLLT10P55197 1068 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 RAB15P59190 212 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 DDX39BQ13838 428 aaKnown RBP9.74□□□□□ -0.85
ERCC3-208ENST00000491292 SKIV2LQ15477 1246 aaKnown RBP9.74□□□□□ -0.85
ERCC3-208ENST00000491292 RAP1GAP2Q684P5 730 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 TAC4Q86UU9 113 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 MFSD2AQ8NA29 543 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 STAG3L4Q8TBR4 150 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 PNPT1Q8TCS8 783 aaKnown RBP9.74□□□□□ -0.85
ERCC3-208ENST00000491292 BHMTQ93088 406 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 SENP8Q96LD8 212 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 TSEN34Q9BSV6 310 aaKnown RBP9.74□□□□□ -0.85
ERCC3-208ENST00000491292 PRKD2Q9BZL6 878 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.74□□□□□ -0.85
ERCC3-208ENST00000491292 CD300AQ9UGN4 299 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 MOSPD1Q9UJG1 213 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 CDC7O00311 574 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 ENO2P09104 434 aaPredicted RBP9.74□□□□□ -0.85
ERCC3-208ENST00000491292 ALDH3A2P51648 485 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 ARSDP51689 593 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 DGKEP52429 567 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 HERVK_113P63132 956 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 ILF2Q12905 390 aaKnown RBP9.74□□□□□ -0.85
ERCC3-208ENST00000491292 ZNF484Q5JVG2 852 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 SPANXN2Q5MJ10 180 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 ATAD3BQ5T9A4 648 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 PAQR3Q6TCH7 311 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 C11orf74Q86VG3 221 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 OSTM1Q86WC4 334 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 ADHFE1Q8IWW8 467 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 RPRD1AQ96P16 312 aaPredicted RBP9.74□□□□□ -0.85
ERCC3-208ENST00000491292 KCNS3Q9BQ31 491 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 TRMOQ9BU70 441 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 ERVK-6Q9BXR3 956 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 NUAK2Q9H093 628 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 TP63Q9H3D4 680 aaPredicted RBP9.74□□□□□ -0.85
ERCC3-208ENST00000491292 IGSF5Q9NSI5 407 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 BOLA1Q9Y3E2 137 aa9.74□□□□□ -0.85
ERCC3-208ENST00000491292 PAGE1O75459 146 aa9.73□□□□□ -0.85
ERCC3-208ENST00000491292 MED26O95402 600 aa9.73□□□□□ -0.85
ERCC3-208ENST00000491292 MYCLP1P12525 358 aaPredicted RBP9.73□□□□□ -0.85
ERCC3-208ENST00000491292 GRM5P41594 1212 aa9.73□□□□□ -0.85
ERCC3-208ENST00000491292 TUFMP49411 452 aaKnown RBP9.73□□□□□ -0.85
ERCC3-208ENST00000491292 OAZ1P54368 228 aa9.73□□□□□ -0.85
ERCC3-208ENST00000491292 AP5B1Q2VPB7 878 aa9.73□□□□□ -0.85
ERCC3-208ENST00000491292 KIAA0408Q6ZU52 694 aa9.73□□□□□ -0.85
ERCC3-208ENST00000491292 GALNT10Q86SR1 603 aa9.73□□□□□ -0.85
ERCC3-208ENST00000491292 C14orf80Q86SX3 495 aa9.73□□□□□ -0.85
ERCC3-208ENST00000491292 METTL23Q86XA0 190 aa9.73□□□□□ -0.85
ERCC3-208ENST00000491292 SCAMP5Q8TAC9 235 aa9.73□□□□□ -0.85
ERCC3-208ENST00000491292 HMGCLL1Q8TB92 370 aa9.73□□□□□ -0.85
ERCC3-208ENST00000491292 NPY6RQ99463 290 aa9.73□□□□□ -0.85
ERCC3-208ENST00000491292 SEMA3CQ99985 751 aa9.73□□□□□ -0.85
ERCC3-208ENST00000491292 VTA1Q9NP79 307 aa9.73□□□□□ -0.85
ERCC3-208ENST00000491292 FBXW11Q9UKB1 542 aa9.73□□□□□ -0.85
ERCC3-208ENST00000491292 BTBD3Q9Y2F9 522 aa9.73□□□□□ -0.85
ERCC3-208ENST00000491292 ARL5AQ9Y689 179 aa9.73□□□□□ -0.85
ERCC3-208ENST00000491292 LOC100130705A0A1B0GUX0 176 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms