RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 ARHGAP42A6NI28 874 aa13.41□□□□□ -0.26
EXOSC3-207ENST00000490516 C2CD4BA6NLJ0 364 aa13.41□□□□□ -0.26
EXOSC3-207ENST00000490516 GRID2O43424 1007 aa13.41□□□□□ -0.26
EXOSC3-207ENST00000490516 SOCS5O75159 536 aa13.41□□□□□ -0.26
EXOSC3-207ENST00000490516 PTPN9P43378 593 aa13.41□□□□□ -0.26
EXOSC3-207ENST00000490516 TSFMP43897 325 aaKnown RBP13.41□□□□□ -0.26
EXOSC3-207ENST00000490516 ARL4DP49703 201 aa13.41□□□□□ -0.26
EXOSC3-207ENST00000490516 STX17P56962 302 aa13.41□□□□□ -0.26
EXOSC3-207ENST00000490516 TUBB4BP68371 445 aa13.41□□□□□ -0.26
EXOSC3-207ENST00000490516 PTSQ03393 145 aa13.41□□□□□ -0.26
EXOSC3-207ENST00000490516 TLE4Q04727 773 aa13.41□□□□□ -0.26
EXOSC3-207ENST00000490516 CDC16Q13042 620 aa13.41□□□□□ -0.26
EXOSC3-207ENST00000490516 TUBB2AQ13885 445 aa13.41□□□□□ -0.26
EXOSC3-207ENST00000490516 KLHL10Q6JEL2 608 aa13.41□□□□□ -0.26
EXOSC3-207ENST00000490516 AOPEPQ8N6M6 819 aa13.41□□□□□ -0.26
EXOSC3-207ENST00000490516 ZNF501Q96CX3 271 aaPredicted RBP13.41□□□□□ -0.26
EXOSC3-207ENST00000490516 DHTKD1Q96HY7 919 aaPredicted RBP13.41□□□□□ -0.26
EXOSC3-207ENST00000490516 SPATA32Q96LK8 384 aa13.41□□□□□ -0.26
EXOSC3-207ENST00000490516 LRFN5Q96NI6 719 aa13.41□□□□□ -0.26
EXOSC3-207ENST00000490516 GSDMAQ96QA5 445 aa13.41□□□□□ -0.26
EXOSC3-207ENST00000490516 TUBB2BQ9BVA1 445 aa13.41□□□□□ -0.26
EXOSC3-207ENST00000490516 RAB33BQ9H082 229 aa13.41□□□□□ -0.26
EXOSC3-207ENST00000490516 SP110Q9HB58 689 aa13.41□□□□□ -0.26
EXOSC3-207ENST00000490516 SLC40A1Q9NP59 571 aa13.41□□□□□ -0.26
EXOSC3-207ENST00000490516 KIAA1468Q9P260 1216 aa13.41□□□□□ -0.26
EXOSC3-207ENST00000490516 NCOA6Q14686 2063 aaPredicted RBP13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 TRGV8A0A0C4DH27 118 aa13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 A0A1W2PQ67 120 aa13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 OR52A4PA6NMU1 304 aa13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 CCL21O00585 134 aa13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 FGF10O15520 208 aaPredicted RBP13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 DDX3YO15523 660 aaKnown RBP13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 PYGLP06737 847 aa13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 RORAP35398 523 aa13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 KIR3DL1P43629 444 aa13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 OTUD4Q01804 1114 aaKnown RBP13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 SLC10A7Q0GE19 358 aa13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 PTCHD3Q3KNS1 767 aa13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 PLA2G4EQ3MJ16 856 aa13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 NAA35Q5VZE5 725 aa13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 SCYL2Q6P3W7 929 aa13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 USP45Q70EL2 814 aa13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 ZNF765Q7L2R6 523 aa13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 D2HGDHQ8N465 521 aa13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 DNAJB14Q8TBM8 379 aa13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 CPT1BQ92523 772 aa13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 CLIP3Q96DZ5 547 aa13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 C14orf79Q96F83 325 aa13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 FER1L6-AS2Q96M78 137 aa13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 PCMTD1Q96MG8 357 aaPredicted RBP13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 PSKH2Q96QS6 385 aa13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 REPIN1Q9BWE0 567 aaKnown RBP13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 GSX1Q9H4S2 264 aaPredicted RBP13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 RMI1Q9H9A7 625 aa13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 MCCC2Q9HCC0 563 aa13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 ARFGAP3Q9NP61 516 aa13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 OLAHQ9NV23 265 aa13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 SLC23A2Q9UGH3 650 aa13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 DNAJC12Q9UKB3 198 aa13.4□□□□□ -0.26
EXOSC3-207ENST00000490516 PRRC2AP48634 2157 aaKnown RBP13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 PDZK1P1A8MUH7 402 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 DFFAO00273 331 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 LDB2O43679 373 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 NUAK1O60285 661 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 KLHL41O60662 606 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 LCA5LO95447 670 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 BRAFP15056 766 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 CYP11B1P15538 503 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 PON1P27169 355 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 RENBPP51606 427 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 CLCNKAP51800 687 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 HSD11B2P80365 405 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 ABRQ12979 859 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 STIM1Q13586 685 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 RFTN1Q14699 578 aaPredicted RBP13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 LBRQ14739 615 aaKnown RBP13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 ZNF169Q14929 603 aaPredicted RBP13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 NCF4Q15080 339 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 ZNF648Q5T619 568 aaPredicted RBP13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 FAM180AQ6UWF9 173 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 NLRP8Q86W28 1048 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 ARHGAP12Q8IWW6 846 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 SYTL1Q8IYJ3 562 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 FAM71AQ8IYT1 594 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 PGBD5Q8N414 524 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 MSANTD4Q8NCY6 345 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 PPP4R1Q8TF05 950 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 CHTF18Q8WVB6 975 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 CNDP1Q96KN2 507 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 NOD2Q9HC29 1040 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 SIX2Q9NPC8 291 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 POT1Q9NUX5 634 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 PCMTD2Q9NV79 361 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 ATXN10Q9UBB4 475 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 FZD10Q9ULW2 581 aa13.39□□□□□ -0.27
EXOSC3-207ENST00000490516 CCDC78A2IDD5 438 aa13.38□□□□□ -0.27
EXOSC3-207ENST00000490516 FADS2P1A8MWK0 482 aa13.38□□□□□ -0.27
EXOSC3-207ENST00000490516 PGLSO95336 258 aa13.38□□□□□ -0.27
EXOSC3-207ENST00000490516 PDHA1P08559 390 aa13.38□□□□□ -0.27
EXOSC3-207ENST00000490516 ZNF8P17098 575 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms