RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 IRF2BP2Q7Z5L9 587 aa8.07□□□□□ -1.12
USP39-216ENST00000490193 SYVN1Q86TM6 617 aa8.07□□□□□ -1.12
USP39-216ENST00000490193 PPP1R3BQ86XI6 285 aa8.07□□□□□ -1.12
USP39-216ENST00000490193 HPS6Q86YV9 775 aa8.07□□□□□ -1.12
USP39-216ENST00000490193 RBM12BQ8IXT5 1001 aaKnown RBP8.07□□□□□ -1.12
USP39-216ENST00000490193 MAML1Q92585 1016 aa8.07□□□□□ -1.12
USP39-216ENST00000490193 FATE1Q969F0 183 aa8.07□□□□□ -1.12
USP39-216ENST00000490193 TGM7Q96PF1 710 aa8.07□□□□□ -1.12
USP39-216ENST00000490193 CSPG4P5Q96PW8 444 aa8.07□□□□□ -1.12
USP39-216ENST00000490193 ERGIC2Q96RQ1 377 aa8.07□□□□□ -1.12
USP39-216ENST00000490193 SLC25A23Q9BV35 468 aa8.07□□□□□ -1.12
USP39-216ENST00000490193 TRIM7Q9C029 511 aa8.07□□□□□ -1.12
USP39-216ENST00000490193 NT5MQ9NPB1 228 aa8.07□□□□□ -1.12
USP39-216ENST00000490193 POT1Q9NUX5 634 aa8.07□□□□□ -1.12
USP39-216ENST00000490193 TAS2R14Q9NYV8 317 aa8.07□□□□□ -1.12
USP39-216ENST00000490193 SCHIP1Q9P0W5 487 aaPredicted RBP8.07□□□□□ -1.12
USP39-216ENST00000490193 ZNF624Q9P2J8 865 aaPredicted RBP8.07□□□□□ -1.12
USP39-216ENST00000490193 NFKBIL1Q9UBC1 381 aaPredicted RBP8.07□□□□□ -1.12
USP39-216ENST00000490193 LNPEPQ9UIQ6 1025 aa8.07□□□□□ -1.12
USP39-216ENST00000490193 SLC30A1Q9Y6M5 507 aa8.07□□□□□ -1.12
USP39-216ENST00000490193 A1L4Q6 167 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 LGALS16A8MUM7 142 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 RASSF9O75901 435 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 TIAF1O95411 115 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 LDLRP01130 860 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 VIPP01282 170 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 TYRP1P17643 537 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 AMD1P17707 334 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 CA4P22748 312 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 IL1R2P27930 398 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 PTPN4P29074 926 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 DCTP40126 519 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 SEPHS1P49903 392 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 EPHB1P54762 984 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 DCDC1P59894 354 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 INPP5JQ15735 1006 aaPredicted RBP8.06□□□□□ -1.12
USP39-216ENST00000490193 CHRNA6Q15825 494 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 BOLA3Q53S33 107 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 CPZQ66K79 652 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 WASH2PQ6VEQ5 465 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 ZNF517Q6ZMY9 492 aaPredicted RBP8.06□□□□□ -1.12
USP39-216ENST00000490193 BPHLQ86WA6 291 aaPredicted RBP8.06□□□□□ -1.12
USP39-216ENST00000490193 Q8NA96 180 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 TEKT4Q8WW24 435 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 RSC1A1Q92681 617 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 ZDHHC12Q96GR4 267 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 SLC41A2Q96JW4 573 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 TIMM29Q9BSF4 260 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 SLC29A3Q9BZD2 475 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 SLC6A16Q9GZN6 736 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 FAM83DQ9H4H8 585 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 PDE7BQ9NP56 450 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 SLC40A1Q9NP59 571 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 WASH6PQ9NQA3 447 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 KLC4Q9NSK0 619 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 PKD2L2Q9NZM6 624 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 ATXN10Q9UBB4 475 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 LIMA1Q9UHB6 759 aaKnown RBP8.06□□□□□ -1.12
USP39-216ENST00000490193 MYO6Q9UM54 1294 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 CHKBQ9Y259 395 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 ZNF451Q9Y4E5 1061 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 SCINQ9Y6U3 715 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 OTOGQ6ZRI0 2925 aa8.06□□□□□ -1.12
USP39-216ENST00000490193 C1orf232A0A0U1RR37 186 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 LRRC10BA6NIK2 292 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 TCP11X1B4DZS4 312 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 KMOO15229 486 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 KIF1CO43896 1103 aaKnown RBP8.05□□□□□ -1.12
USP39-216ENST00000490193 DPM1O60762 260 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 MTA2O94776 668 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 CLDN1O95832 211 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 GZMAP12544 262 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 BRAFP15056 766 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 ZNF8P17098 575 aaPredicted RBP8.05□□□□□ -1.12
USP39-216ENST00000490193 POU3F2P20265 443 aaPredicted RBP8.05□□□□□ -1.12
USP39-216ENST00000490193 LPOP22079 712 aaPredicted RBP8.05□□□□□ -1.12
USP39-216ENST00000490193 RIPPLY3P57055 190 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 DSC2Q02487 901 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 GALNT2Q10471 571 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 TUBB3Q13509 450 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 IL10RAQ13651 578 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 SMTNL2Q2TAL5 461 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 ANKRD20A8PQ5CZ79 823 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 AGAP9Q5VTM2 703 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 CACHD1Q5VU97 1274 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 PDPK2PQ6A1A2 396 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 TIGD7Q6NT04 549 aaPredicted RBP8.05□□□□□ -1.12
USP39-216ENST00000490193 PWWP2BQ6NUJ5 590 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 JMJD6Q6NYC1 403 aaPredicted RBP8.05□□□□□ -1.12
USP39-216ENST00000490193 KMT5CQ86Y97 462 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 TRIM48Q8IWZ4 208 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 ARRDC2Q8TBH0 407 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 FAM71BQ8TC56 605 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 ADAMTS17Q8TE56 1095 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 UBXN4Q92575 508 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 RNF31Q96EP0 1072 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 ELMO2Q96JJ3 720 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 RUFY1Q96T51 708 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 ZSCAN5AQ9BUG6 496 aa8.05□□□□□ -1.12
USP39-216ENST00000490193 ING2Q9H160 280 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms