RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	CDH19	Q9H159	772 aa		18.02	■□□□□ 0.48
SRM-206	ENST00000490101	STMN4	Q9H169	189 aa	Predicted RBP	18.02	■□□□□ 0.48
SRM-206	ENST00000490101	IL26	Q9NPH9	171 aa		18.02	■□□□□ 0.48
SRM-206	ENST00000490101	CATSPERZ	Q9NTU4	200 aa		18.02	■□□□□ 0.48
SRM-206	ENST00000490101	TOR4A	Q9NXH8	423 aa		18.02	■□□□□ 0.48
SRM-206	ENST00000490101	PKD2L2	Q9NZM6	624 aa		18.02	■□□□□ 0.48
SRM-206	ENST00000490101	MARCH4	Q9P2E8	410 aa	Predicted RBP	18.02	■□□□□ 0.48
SRM-206	ENST00000490101	TXNDC16	Q9P2K2	825 aa		18.02	■□□□□ 0.48
SRM-206	ENST00000490101	CTNNAL1	Q9UBT7	734 aa		18.02	■□□□□ 0.48
SRM-206	ENST00000490101	SCN8A	Q9UQD0	1980 aa		18.02	■□□□□ 0.47
SRM-206	ENST00000490101		A0A1W2PPC4	97 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	GAPDHS	O14556	408 aa	Predicted RBP	18.01	■□□□□ 0.47
SRM-206	ENST00000490101	FAM155B	O75949	473 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	KRT38	O76015	456 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	OGN	P20774	298 aa	Known RBP	18.01	■□□□□ 0.47
SRM-206	ENST00000490101	MC4R	P32245	332 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	SPAM1	P38567	509 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	SLC1A2	P43004	574 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	GRK6	P43250	576 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	DCDC1	P59894	354 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	RACK1	P63244	317 aa	Known RBP	18.01	■□□□□ 0.47
SRM-206	ENST00000490101	ILF2	Q12905	390 aa	Known RBP	18.01	■□□□□ 0.47
SRM-206	ENST00000490101	TMED2	Q15363	201 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	FASTKD1	Q53R41	847 aa	Known RBP	18.01	■□□□□ 0.47
SRM-206	ENST00000490101	TTMP	Q5BVD1	217 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	PRAMEF14	Q5SWL7	426 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	18.01	■□□□□ 0.47
SRM-206	ENST00000490101	TAOK1	Q7L7X3	1001 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	HSD11B1L	Q7Z5J1	315 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	TECPR1	Q7Z6L1	1165 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	18.01	■□□□□ 0.47
SRM-206	ENST00000490101	PROSER1	Q86XN7	944 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	MARCH9	Q86YJ5	346 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	CILP2	Q8IUL8	1156 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	DENND6A	Q8IWF6	608 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	NRSN1	Q8IZ57	195 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	CYP4X1	Q8N118	509 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	GPR26	Q8NDV2	337 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	OR2T34	Q8NGX1	318 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	TLCD1	Q96CP7	247 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	ATP6V1G3	Q96LB4	118 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	COQ10A	Q96MF6	247 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	CENPH	Q9H3R5	247 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	EBF2	Q9HAK2	575 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	AASDHPPT	Q9NRN7	309 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	TBK1	Q9UHD2	729 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	ITM2B	Q9Y287	266 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	SLC30A1	Q9Y6M5	507 aa		18.01	■□□□□ 0.47
SRM-206	ENST00000490101	TP53BP1	Q12888	1972 aa	Predicted RBP	18	■□□□□ 0.47
SRM-206	ENST00000490101	PLXNB3	Q9ULL4	1909 aa		18	■□□□□ 0.47
SRM-206	ENST00000490101	GLYATL1P3	A0A0U1RQE8	302 aa		18	■□□□□ 0.47
SRM-206	ENST00000490101	IQANK1	A0A1B0GTG1	560 aa		18	■□□□□ 0.47
SRM-206	ENST00000490101	HMGB1P1	B2RPK0	211 aa	Predicted RBP	18	■□□□□ 0.47
SRM-206	ENST00000490101	TSPAN6	O43657	245 aa		18	■□□□□ 0.47
SRM-206	ENST00000490101	S1PR4	O95977	384 aa		18	■□□□□ 0.47
SRM-206	ENST00000490101	AHSG	P02765	367 aa		18	■□□□□ 0.47
SRM-206	ENST00000490101	SNRPA	P09012	282 aa	Known RBP	18	■□□□□ 0.47
SRM-206	ENST00000490101	ELFN1	P0C7U0	828 aa		18	■□□□□ 0.47
SRM-206	ENST00000490101	GABRB3	P28472	473 aa		18	■□□□□ 0.47
SRM-206	ENST00000490101	ATP5D	P30049	168 aa		18	■□□□□ 0.47
SRM-206	ENST00000490101	SPR	P35270	261 aa	Predicted RBP	18	■□□□□ 0.47
SRM-206	ENST00000490101	LEPR	P48357	1165 aa	Known RBP	18	■□□□□ 0.47
SRM-206	ENST00000490101	LIG3	P49916	1009 aa		18	■□□□□ 0.47
SRM-206	ENST00000490101	TAS2R38	P59533	333 aa		18	■□□□□ 0.47
SRM-206	ENST00000490101	CACNG1	Q06432	222 aa		18	■□□□□ 0.47
SRM-206	ENST00000490101	DNAJC3	Q13217	504 aa		18	■□□□□ 0.47
SRM-206	ENST00000490101	CTBP1	Q13363	440 aa		18	■□□□□ 0.47
SRM-206	ENST00000490101	TYSND1	Q2T9J0	566 aa		18	■□□□□ 0.47
SRM-206	ENST00000490101	GPR33	Q49SQ1	333 aa		18	■□□□□ 0.47
SRM-206	ENST00000490101	MICALCL	Q6ZW33	695 aa		18	■□□□□ 0.47
SRM-206	ENST00000490101	MTERF4	Q7Z6M4	381 aa	Known RBP	18	■□□□□ 0.47
SRM-206	ENST00000490101	OR14C36	Q8NHC7	312 aa		18	■□□□□ 0.47
SRM-206	ENST00000490101	MZB1	Q8WU39	189 aa		18	■□□□□ 0.47
SRM-206	ENST00000490101	MTBP	Q96DY7	904 aa		18	■□□□□ 0.47
SRM-206	ENST00000490101	RBBP8	Q99708	897 aa		18	■□□□□ 0.47
SRM-206	ENST00000490101	RHOJ	Q9H4E5	214 aa		18	■□□□□ 0.47
SRM-206	ENST00000490101	CCDC86	Q9H6F5	360 aa	Known RBP	18	■□□□□ 0.47
SRM-206	ENST00000490101	FZD4	Q9ULV1	537 aa		18	■□□□□ 0.47
SRM-206	ENST00000490101	LHX6	Q9UPM6	363 aa		18	■□□□□ 0.47
SRM-206	ENST00000490101	PTPRB	P23467	1997 aa		18	■□□□□ 0.47
SRM-206	ENST00000490101	ZNF106	Q9H2Y7	1883 aa	Known RBP	17.99	■□□□□ 0.47
SRM-206	ENST00000490101	TRBV5-4	A0A0C4DH59	114 aa		17.99	■□□□□ 0.47
SRM-206	ENST00000490101		H3BQF6	201 aa		17.99	■□□□□ 0.47
SRM-206	ENST00000490101	NEMP1	O14524	444 aa		17.99	■□□□□ 0.47
SRM-206	ENST00000490101	VILL	O15195	856 aa		17.99	■□□□□ 0.47
SRM-206	ENST00000490101	SRP72	O76094	671 aa	Known RBP	17.99	■□□□□ 0.47
SRM-206	ENST00000490101	WNT1	P04628	370 aa		17.99	■□□□□ 0.47
SRM-206	ENST00000490101	LIMK2	P53671	638 aa		17.99	■□□□□ 0.47
SRM-206	ENST00000490101	ZRANB3	Q5FWF4	1079 aa		17.99	■□□□□ 0.47
SRM-206	ENST00000490101	AARS2	Q5JTZ9	985 aa	Known RBP	17.99	■□□□□ 0.47
SRM-206	ENST00000490101	RFLNA	Q6ZTI6	216 aa		17.99	■□□□□ 0.47
SRM-206	ENST00000490101		Q6ZVL8	140 aa		17.99	■□□□□ 0.47
SRM-206	ENST00000490101	ZNF765	Q7L2R6	523 aa		17.99	■□□□□ 0.47
SRM-206	ENST00000490101	SNX20	Q7Z614	316 aa		17.99	■□□□□ 0.47
SRM-206	ENST00000490101	ZC3HC1	Q86WB0	502 aa	Known RBP	17.99	■□□□□ 0.47
SRM-206	ENST00000490101	GATAD2A	Q86YP4	633 aa		17.99	■□□□□ 0.47
SRM-206	ENST00000490101	PIANP	Q8IYJ0	282 aa		17.99	■□□□□ 0.47
SRM-206	ENST00000490101	OTUD6B	Q8N6M0	293 aa		17.99	■□□□□ 0.47
SRM-206	ENST00000490101	MDM1	Q8TC05	714 aa		17.99	■□□□□ 0.47
SRM-206	ENST00000490101	WRAP53	Q9BUR4	548 aa	Known RBP	17.99	■□□□□ 0.47

Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms