RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 CRYBG3Q68DQ2 2970 aa13.73□□□□□ -0.21
VARS-227ENST00000489979 CELSR2Q9HCU4 2923 aa13.72□□□□□ -0.21
VARS-227ENST00000489979 OR52A4PA6NMU1 304 aa13.72□□□□□ -0.21
VARS-227ENST00000489979 TCP11X1B4DZS4 312 aa13.72□□□□□ -0.21
VARS-227ENST00000489979 MATN3O15232 486 aa13.72□□□□□ -0.21
VARS-227ENST00000489979 MFSD11O43934 449 aa13.72□□□□□ -0.21
VARS-227ENST00000489979 GZMAP12544 262 aa13.72□□□□□ -0.21
VARS-227ENST00000489979 BRAFP15056 766 aa13.72□□□□□ -0.21
VARS-227ENST00000489979 FOLR1P15328 257 aa13.72□□□□□ -0.21
VARS-227ENST00000489979 ZNF7P17097 686 aaPredicted RBP13.72□□□□□ -0.21
VARS-227ENST00000489979 IL4RP24394 825 aa13.72□□□□□ -0.21
VARS-227ENST00000489979 RPL10P27635 214 aaKnown RBP13.72□□□□□ -0.21
VARS-227ENST00000489979 ZNF165P49910 485 aa13.72□□□□□ -0.21
VARS-227ENST00000489979 PPP1CAP62136 330 aa13.72□□□□□ -0.21
VARS-227ENST00000489979 GALNT2Q10471 571 aa13.72□□□□□ -0.21
VARS-227ENST00000489979 MMRN1Q13201 1228 aa13.72□□□□□ -0.21
VARS-227ENST00000489979 TUBB3Q13509 450 aa13.72□□□□□ -0.21
VARS-227ENST00000489979 IL10RAQ13651 578 aa13.72□□□□□ -0.21
VARS-227ENST00000489979 GPR18Q14330 331 aa13.72□□□□□ -0.21
VARS-227ENST00000489979 KRT81Q14533 505 aa13.72□□□□□ -0.21
VARS-227ENST00000489979 KCNAB1Q14722 419 aa13.72□□□□□ -0.21
VARS-227ENST00000489979 INPP5JQ15735 1006 aaPredicted RBP13.72□□□□□ -0.21
VARS-227ENST00000489979 ZNF569Q5MCW4 686 aa13.72□□□□□ -0.21
VARS-227ENST00000489979 ALS2CLQ60I27 953 aa13.72□□□□□ -0.21
VARS-227ENST00000489979 CYB5D1Q6P9G0 228 aa13.72□□□□□ -0.21
VARS-227ENST00000489979 ZNF571Q7Z3V5 609 aaPredicted RBP13.72□□□□□ -0.21
VARS-227ENST00000489979 LRRN4Q8WUT4 740 aa13.72□□□□□ -0.21
VARS-227ENST00000489979 TEKT4Q8WW24 435 aa13.72□□□□□ -0.21
VARS-227ENST00000489979 EID2BQ96D98 161 aa13.72□□□□□ -0.21
VARS-227ENST00000489979 MLPHQ9BV36 600 aaPredicted RBP13.72□□□□□ -0.21
VARS-227ENST00000489979 ING2Q9H160 280 aa13.72□□□□□ -0.21
VARS-227ENST00000489979 HAUS4Q9H6D7 363 aa13.72□□□□□ -0.21
VARS-227ENST00000489979 MRPL47Q9HD33 250 aaKnown RBP13.72□□□□□ -0.21
VARS-227ENST00000489979 SLC40A1Q9NP59 571 aa13.72□□□□□ -0.21
VARS-227ENST00000489979 LUZP4Q9P127 313 aa13.72□□□□□ -0.21
VARS-227ENST00000489979 EPHA6Q9UF33 1036 aa13.72□□□□□ -0.21
VARS-227ENST00000489979 DOPEY1Q5JWR5 2465 aa13.71□□□□□ -0.21
VARS-227ENST00000489979 IGHV5-51A0A0C4DH38 117 aa13.71□□□□□ -0.21
VARS-227ENST00000489979 LRRC10BA6NIK2 292 aa13.71□□□□□ -0.21
VARS-227ENST00000489979 ANKRD66B4E2M5 251 aa13.71□□□□□ -0.21
VARS-227ENST00000489979 GPR89AB7ZAQ6 455 aa13.71□□□□□ -0.21
VARS-227ENST00000489979 DDX3XO00571 662 aaKnown RBP eCLIP13.71□□□□□ -0.21
VARS-227ENST00000489979 CHUKO15111 745 aa13.71□□□□□ -0.21
VARS-227ENST00000489979 KMOO15229 486 aa13.71□□□□□ -0.21
VARS-227ENST00000489979 HLA-DQB2P05538 268 aa13.71□□□□□ -0.21
VARS-227ENST00000489979 CD48P09326 243 aa13.71□□□□□ -0.21
VARS-227ENST00000489979 GPR89BP0CG08 455 aa13.71□□□□□ -0.21
VARS-227ENST00000489979 CDK11BP21127 795 aaKnown RBP13.71□□□□□ -0.21
VARS-227ENST00000489979 DCTP40126 519 aa13.71□□□□□ -0.21
VARS-227ENST00000489979 DRG2P55039 364 aaKnown RBP13.71□□□□□ -0.21
VARS-227ENST00000489979 RPS15P62841 145 aaKnown RBP13.71□□□□□ -0.21
VARS-227ENST00000489979 LAMB3Q13751 1172 aa13.71□□□□□ -0.21
VARS-227ENST00000489979 ASIC2Q16515 512 aa13.71□□□□□ -0.21
VARS-227ENST00000489979 CCDC122Q5T0U0 273 aa13.71□□□□□ -0.21
VARS-227ENST00000489979 PAPD7Q5XG87 772 aaKnown RBP13.71□□□□□ -0.21
VARS-227ENST00000489979 TIGD7Q6NT04 549 aaPredicted RBP13.71□□□□□ -0.21
VARS-227ENST00000489979 ABRAXAS1Q6UWZ7 409 aa13.71□□□□□ -0.21
VARS-227ENST00000489979 APTXQ7Z2E3 356 aaKnown RBP13.71□□□□□ -0.21
VARS-227ENST00000489979 MAMDC2Q7Z304 686 aaPredicted RBP13.71□□□□□ -0.21
VARS-227ENST00000489979 SYVN1Q86TM6 617 aa13.71□□□□□ -0.21
VARS-227ENST00000489979 LRRTM4Q86VH4 590 aa13.71□□□□□ -0.21
VARS-227ENST00000489979 SIDT2Q8NBJ9 832 aaKnown RBP13.71□□□□□ -0.21
VARS-227ENST00000489979 PRR7Q8TB68 274 aa13.71□□□□□ -0.21
VARS-227ENST00000489979 CXorf40BQ96DE9 158 aa13.71□□□□□ -0.21
VARS-227ENST00000489979 FCRL4Q96PJ5 515 aa13.71□□□□□ -0.21
VARS-227ENST00000489979 TIMM29Q9BSF4 260 aa13.71□□□□□ -0.21
VARS-227ENST00000489979 MFRPQ9BY79 579 aa13.71□□□□□ -0.21
VARS-227ENST00000489979 TRIM10Q9UDY6 481 aa13.71□□□□□ -0.21
VARS-227ENST00000489979 AMACRQ9UHK6 382 aa13.71□□□□□ -0.21
VARS-227ENST00000489979 MYO6Q9UM54 1294 aa13.71□□□□□ -0.21
VARS-227ENST00000489979 ZNF451Q9Y4E5 1061 aa13.71□□□□□ -0.21
VARS-227ENST00000489979 LRRC53A6NM62 1247 aa13.7□□□□□ -0.22
VARS-227ENST00000489979 MTX2O75431 263 aa13.7□□□□□ -0.22
VARS-227ENST00000489979 CLDN1O95832 211 aa13.7□□□□□ -0.22
VARS-227ENST00000489979 EBLN1P0CF75 366 aa13.7□□□□□ -0.22
VARS-227ENST00000489979 MYBL1P10243 752 aa13.7□□□□□ -0.22
VARS-227ENST00000489979 CCNCP24863 283 aa13.7□□□□□ -0.22
VARS-227ENST00000489979 CD86P42081 329 aa13.7□□□□□ -0.22
VARS-227ENST00000489979 SLC25A11Q02978 314 aaKnown RBP13.7□□□□□ -0.22
VARS-227ENST00000489979 PIGHQ14442 188 aaPredicted RBP13.7□□□□□ -0.22
VARS-227ENST00000489979 CHRNA6Q15825 494 aa13.7□□□□□ -0.22
VARS-227ENST00000489979 IFI16Q16666 785 aaKnown RBP13.7□□□□□ -0.22
VARS-227ENST00000489979 NCBP2-AS2Q69YL0 99 aa13.7□□□□□ -0.22
VARS-227ENST00000489979 JMJD6Q6NYC1 403 aaPredicted RBP13.7□□□□□ -0.22
VARS-227ENST00000489979 CERS6Q6ZMG9 384 aa13.7□□□□□ -0.22
VARS-227ENST00000489979 ZNF547Q8IVP9 402 aa13.7□□□□□ -0.22
VARS-227ENST00000489979 RBM12BQ8IXT5 1001 aaKnown RBP13.7□□□□□ -0.22
VARS-227ENST00000489979 Q8NA96 180 aa13.7□□□□□ -0.22
VARS-227ENST00000489979 GPR26Q8NDV2 337 aa13.7□□□□□ -0.22
VARS-227ENST00000489979 UBXN4Q92575 508 aa13.7□□□□□ -0.22
VARS-227ENST00000489979 GLYATL1Q969I3 302 aa13.7□□□□□ -0.22
VARS-227ENST00000489979 TRIM11Q96F44 468 aa13.7□□□□□ -0.22
VARS-227ENST00000489979 SLC41A2Q96JW4 573 aa13.7□□□□□ -0.22
VARS-227ENST00000489979 BTBD6Q96KE9 485 aa13.7□□□□□ -0.22
VARS-227ENST00000489979 ZSCAN5AQ9BUG6 496 aa13.7□□□□□ -0.22
VARS-227ENST00000489979 SLC29A3Q9BZD2 475 aa13.7□□□□□ -0.22
VARS-227ENST00000489979 RAB33BQ9H082 229 aa13.7□□□□□ -0.22
VARS-227ENST00000489979 ZFYVE1Q9HBF4 777 aa13.7□□□□□ -0.22
VARS-227ENST00000489979 SLAMF7Q9NQ25 335 aa13.7□□□□□ -0.22
VARS-227ENST00000489979 HAUS2Q9NVX0 235 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms