RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 ZFYVE1Q9HBF4 777 aa16.7■□□□□ 0.26
TOP3B-217ENST00000489581 PADI1Q9ULC6 663 aa16.7■□□□□ 0.26
TOP3B-217ENST00000489581 SHOC2Q9UQ13 582 aa16.7■□□□□ 0.26
TOP3B-217ENST00000489581 SEC16AO15027 2179 aa16.7■□□□□ 0.26
TOP3B-217ENST00000489581 CREBBPQ92793 2442 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 OR52A4PA6NMU1 304 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 TTLL8A6PVC2 850 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 MYO1FO00160 1098 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 CHUKO15111 745 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 VPS4BO75351 444 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 MTX2O75431 263 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 JCHAINP01591 159 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 SLC4A1P02730 911 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 PIRTP0C851 137 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 FGF5P12034 268 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 CASP14P31944 242 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 PMS2P54278 862 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 GBE1Q04446 702 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 SLC10A2Q12908 348 aaPredicted RBP16.69■□□□□ 0.26
TOP3B-217ENST00000489581 FILIP1LQ4L180 1135 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 CCDC183Q5T5S1 534 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 IRGCQ6NXR0 463 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 CLEC17AQ6ZS10 378 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 LRRTM4Q86VH4 590 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 PPP1R3BQ86XI6 285 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 KCTD6Q8NC69 237 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 CT55Q8WUE5 264 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 KLHL6Q8WZ60 621 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 ADGRE3Q9BY15 652 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 TRIM55Q9BYV6 548 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 LHX9Q9NQ69 397 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 TRIM10Q9UDY6 481 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 VPS4AQ9UN37 437 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 PCDHGA6Q9Y5G7 932 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 HIVEP3Q5T1R4 2406 aa16.69■□□□□ 0.26
TOP3B-217ENST00000489581 KCNK1O00180 336 aa16.68■□□□□ 0.26
TOP3B-217ENST00000489581 KMOO15229 486 aa16.68■□□□□ 0.26
TOP3B-217ENST00000489581 AGFG2O95081 481 aa16.68■□□□□ 0.26
TOP3B-217ENST00000489581 TIAF1O95411 115 aa16.68■□□□□ 0.26
TOP3B-217ENST00000489581 BRAFP15056 766 aa16.68■□□□□ 0.26
TOP3B-217ENST00000489581 GNLYP22749 145 aa16.68■□□□□ 0.26
TOP3B-217ENST00000489581 DRG2P55039 364 aaKnown RBP16.68■□□□□ 0.26
TOP3B-217ENST00000489581 GPR18Q14330 331 aa16.68■□□□□ 0.26
TOP3B-217ENST00000489581 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.68■□□□□ 0.26
TOP3B-217ENST00000489581 PRSS42Q7Z5A4 293 aa16.68■□□□□ 0.26
TOP3B-217ENST00000489581 EFCAB3Q8N7B9 438 aa16.68■□□□□ 0.26
TOP3B-217ENST00000489581 GLYATL1Q969I3 302 aa16.68■□□□□ 0.26
TOP3B-217ENST00000489581 CXorf40BQ96DE9 158 aa16.68■□□□□ 0.26
TOP3B-217ENST00000489581 ZDHHC12Q96GR4 267 aa16.68■□□□□ 0.26
TOP3B-217ENST00000489581 RUFY1Q96T51 708 aa16.68■□□□□ 0.26
TOP3B-217ENST00000489581 ZSCAN5AQ9BUG6 496 aa16.68■□□□□ 0.26
TOP3B-217ENST00000489581 AKIRIN1Q9H9L7 192 aaPredicted RBP16.68■□□□□ 0.26
TOP3B-217ENST00000489581 SLC40A1Q9NP59 571 aa16.68■□□□□ 0.26
TOP3B-217ENST00000489581 POT1Q9NUX5 634 aa16.68■□□□□ 0.26
TOP3B-217ENST00000489581 GOLGA6L3A6NEY3 463 aa16.67■□□□□ 0.26
TOP3B-217ENST00000489581 GPR89AB7ZAQ6 455 aa16.67■□□□□ 0.26
TOP3B-217ENST00000489581 CDK14O94921 469 aa16.67■□□□□ 0.26
TOP3B-217ENST00000489581 CYP1A2P05177 515 aa16.67■□□□□ 0.26
TOP3B-217ENST00000489581 GPR89BP0CG08 455 aa16.67■□□□□ 0.26
TOP3B-217ENST00000489581 NELFEP18615 380 aaKnown RBP16.67■□□□□ 0.26
TOP3B-217ENST00000489581 MX2P20592 715 aa16.67■□□□□ 0.26
TOP3B-217ENST00000489581 CAPZBP47756 277 aa16.67■□□□□ 0.26
TOP3B-217ENST00000489581 PPP1CAP62136 330 aa16.67■□□□□ 0.26
TOP3B-217ENST00000489581 TYRO3Q06418 890 aa16.67■□□□□ 0.26
TOP3B-217ENST00000489581 SEMA5AQ13591 1074 aa16.67■□□□□ 0.26
TOP3B-217ENST00000489581 KHDC1Q4VXA5 237 aaKnown RBP16.67■□□□□ 0.26
TOP3B-217ENST00000489581 HGSNATQ68CP4 663 aa16.67■□□□□ 0.26
TOP3B-217ENST00000489581 CAPRIN2Q6IMN6 1127 aaKnown RBP16.67■□□□□ 0.26
TOP3B-217ENST00000489581 ABRAXAS1Q6UWZ7 409 aa16.67■□□□□ 0.26
TOP3B-217ENST00000489581 TMC3Q7Z5M5 1100 aa16.67■□□□□ 0.26
TOP3B-217ENST00000489581 ZNF547Q8IVP9 402 aa16.67■□□□□ 0.26
TOP3B-217ENST00000489581 APLFQ8IW19 511 aaPredicted RBP16.67■□□□□ 0.26
TOP3B-217ENST00000489581 TRAM1L1Q8N609 369 aa16.67■□□□□ 0.26
TOP3B-217ENST00000489581 PQLC3Q8N755 202 aa16.67■□□□□ 0.26
TOP3B-217ENST00000489581 CNTD1Q8N815 330 aa16.67■□□□□ 0.26
TOP3B-217ENST00000489581 CPT1CQ8TCG5 803 aa16.67■□□□□ 0.26
TOP3B-217ENST00000489581 NAP1L5Q96NT1 182 aaPredicted RBP16.67■□□□□ 0.26
TOP3B-217ENST00000489581 ZNF670Q9BS34 389 aa16.67■□□□□ 0.26
TOP3B-217ENST00000489581 TIMM29Q9BSF4 260 aa16.67■□□□□ 0.26
TOP3B-217ENST00000489581 BRD8Q9H0E9 1235 aa16.67■□□□□ 0.26
TOP3B-217ENST00000489581 ACTL8Q9H568 366 aa16.67■□□□□ 0.26
TOP3B-217ENST00000489581 PLEKHB1Q9UF11 243 aaPredicted RBP16.67■□□□□ 0.26
TOP3B-217ENST00000489581 RECKO95980 971 aa16.66■□□□□ 0.26
TOP3B-217ENST00000489581 MT-ND3P03897 115 aa16.66■□□□□ 0.26
TOP3B-217ENST00000489581 FOLR1P15328 257 aa16.66■□□□□ 0.26
TOP3B-217ENST00000489581 IDSP22304 550 aa16.66■□□□□ 0.26
TOP3B-217ENST00000489581 DCDC1P59894 354 aa16.66■□□□□ 0.26
TOP3B-217ENST00000489581 RPS18P62269 152 aaKnown RBP16.66■□□□□ 0.26
TOP3B-217ENST00000489581 ZBTB17Q13105 803 aa16.66■□□□□ 0.26
TOP3B-217ENST00000489581 KCNAB1Q14722 419 aa16.66■□□□□ 0.26
TOP3B-217ENST00000489581 PDK2Q15119 407 aa16.66■□□□□ 0.26
TOP3B-217ENST00000489581 FHL5Q5TD97 284 aa16.66■□□□□ 0.26
TOP3B-217ENST00000489581 PWWP2BQ6NUJ5 590 aa16.66■□□□□ 0.26
TOP3B-217ENST00000489581 FAM199XQ6PEV8 388 aaPredicted RBP16.66■□□□□ 0.26
TOP3B-217ENST00000489581 SIDT2Q8NBJ9 832 aaKnown RBP16.66■□□□□ 0.26
TOP3B-217ENST00000489581 GALNT11Q8NCW6 608 aa16.66■□□□□ 0.26
TOP3B-217ENST00000489581 HDAC11Q96DB2 347 aa16.66■□□□□ 0.26
TOP3B-217ENST00000489581 GPR63Q9BZJ6 419 aa16.66■□□□□ 0.26
TOP3B-217ENST00000489581 PDE7BQ9NP56 450 aa16.66■□□□□ 0.26
TOP3B-217ENST00000489581 EPHA6Q9UF33 1036 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms