RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 C17orf53Q8N3J3 647 aaPredicted RBP7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 C3orf56Q8N813 242 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 PLA2G15Q8NCC3 412 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 RNF139Q8WU17 664 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 FAM222BQ8WU58 562 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 PERPQ96FX8 193 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 C16orf45Q96MC5 204 aaPredicted RBP7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 LMF1Q96S06 567 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 HEPHQ9BQS7 1158 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 SARGQ9BW04 601 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 NAA15Q9BXJ9 866 aaKnown RBP7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 SDCBP2Q9H190 292 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 SARS2Q9NP81 518 aaKnown RBP7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 KCND1Q9NSA2 647 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 OGFRQ9NZT2 677 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 KCND2Q9NZV8 630 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 LIMA1Q9UHB6 759 aaKnown RBP7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 MOSPD1Q9UJG1 213 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 COQ6Q9Y2Z9 468 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 PHF3Q92576 2039 aaKnown RBP7.34□□□□□ -1.24
EXOSC3-206ENST00000489414 DYNC2H1Q8NCM8 4307 aaKnown RBP7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 ROS1P08922 2347 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 KLRC4O43908 158 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 STX10O60499 249 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 DNAJC6O75061 913 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 MATN4O95460 622 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 FUCA1P04066 466 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 SNRPBP14678 240 aaKnown RBP7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 CREB1P16220 341 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 MTIF2P46199 727 aaKnown RBP7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 ZNF131P52739 623 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 ARG2P78540 354 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 CTBSQ01459 385 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 NFATC2Q13469 925 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 AGERQ15109 404 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 KRT31Q15323 416 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 HYAL4Q2M3T9 481 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 LRRC73Q5JTD7 316 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 HYIQ5T013 277 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 PM20D1Q6GTS8 502 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 ISLR2Q6UXK2 745 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 LINC00696Q6ZRV3 163 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 CIR1Q86X95 450 aaPredicted RBP7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 CCDC71Q8IV32 467 aaPredicted RBP7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 LGI2Q8N0V4 545 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 LIX1Q8N485 282 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 KIF18AQ8NI77 898 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 EDEM1Q92611 657 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 PIGTQ969N2 578 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 IQCDQ96DY2 449 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 TGM7Q96PF1 710 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 PANX2Q96RD6 677 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 MAP3K3Q99759 626 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 BAG1Q99933 345 aaPredicted RBP7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 WRAP53Q9BUR4 548 aaKnown RBP7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 LGR4Q9BXB1 951 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 BEX2Q9BXY8 128 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 PTGFRNQ9P2B2 879 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 VPS28Q9UK41 221 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 PADI2Q9Y2J8 665 aa7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 EPN1Q9Y6I3 576 aaPredicted RBP7.33□□□□□ -1.24
EXOSC3-206ENST00000489414 NOTCH3Q9UM47 2321 aa7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 TRBV23OR9-2A0A075B6M9 112 aa7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 UQCRHLA0A096LP55 91 aa7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 A0A1W2PPR1 153 aa7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 LRRC10BA6NIK2 292 aa7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 DYNC1I1O14576 645 aa7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 PRRG2O14669 202 aa7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 ZNHIT1O43257 154 aa7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 RASSF9O75901 435 aa7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 LDHAP00338 332 aaKnown RBP7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 UQCRHP07919 91 aa7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 PEX19P40855 299 aa7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 ETV3P41162 512 aa7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 ACTR1BP42025 376 aa7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 CCNHP51946 323 aaPredicted RBP7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 ACTR1AP61163 376 aa7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 PMP22Q01453 160 aa7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 UBXN1Q04323 297 aa7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 LRRC63Q05C16 580 aa7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 TBX2Q13207 712 aaPredicted RBP7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 TNK1Q13470 666 aa7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 ZNF805Q5CZA5 627 aa7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 FKBP15Q5T1M5 1219 aa7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 OTUD1Q5VV17 481 aaPredicted RBP7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 TIGD7Q6NT04 549 aaPredicted RBP7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 MSANTD2Q6P1R3 559 aa7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 GPBP1Q86WP2 473 aa7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 TMEM126BQ8IUX1 230 aa7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 GUF1Q8N442 669 aaKnown RBP7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 MYCT1Q8N699 235 aa7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 RND1Q92730 232 aa7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 FCRL2Q96LA5 508 aaPredicted RBP7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 MLPHQ9BV36 600 aaPredicted RBP7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 TBC1D10AQ9BXI6 508 aa7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 DUSP16Q9BY84 665 aa7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 VPS16Q9H269 839 aa7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 SUDS3Q9H7L9 328 aaPredicted RBP7.32□□□□□ -1.24
EXOSC3-206ENST00000489414 BLOC1S4Q9NUP1 217 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms