RNA–Protein interactions for RNA: ENST00000489318.1

C9orf3-220, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-220ENST00000489318 CNOT6Q9ULM6 557 aaKnown RBP11.36□□□□□ -0.59
C9orf3-220ENST00000489318 ZFR2Q9UPR6 939 aaKnown RBP11.36□□□□□ -0.59
C9orf3-220ENST00000489318 COQ6Q9Y2Z9 468 aa11.36□□□□□ -0.59
C9orf3-220ENST00000489318 TCRBV21S2A2A0A5A6 115 aa11.35□□□□□ -0.59
C9orf3-220ENST00000489318 CFAP99D6REC4 459 aa11.35□□□□□ -0.59
C9orf3-220ENST00000489318 G3V2L1 256 aa11.35□□□□□ -0.59
C9orf3-220ENST00000489318 TK2O00142 265 aa11.35□□□□□ -0.59
C9orf3-220ENST00000489318 EIF3FO00303 357 aaPredicted RBP11.35□□□□□ -0.59
C9orf3-220ENST00000489318 SGTAO43765 313 aa11.35□□□□□ -0.59
C9orf3-220ENST00000489318 LZTS3O60299 673 aaPredicted RBP11.35□□□□□ -0.59
C9orf3-220ENST00000489318 CCDC166P0CW27 439 aa11.35□□□□□ -0.59
C9orf3-220ENST00000489318 TAC1P20366 129 aa11.35□□□□□ -0.59
C9orf3-220ENST00000489318 ATP6V0D1P61421 351 aa11.35□□□□□ -0.59
C9orf3-220ENST00000489318 RPS21P63220 83 aaKnown RBP11.35□□□□□ -0.59
C9orf3-220ENST00000489318 PPARDQ03181 441 aa11.35□□□□□ -0.59
C9orf3-220ENST00000489318 GAS6Q14393 721 aa11.35□□□□□ -0.59
C9orf3-220ENST00000489318 CSHL1Q14406 222 aa11.35□□□□□ -0.59
C9orf3-220ENST00000489318 GBX1Q14549 363 aa11.35□□□□□ -0.59
C9orf3-220ENST00000489318 ACAP2Q15057 778 aa11.35□□□□□ -0.59
C9orf3-220ENST00000489318 KHDC1Q4VXA5 237 aaKnown RBP11.35□□□□□ -0.59
C9orf3-220ENST00000489318 AGAP9Q5VTM2 703 aa11.35□□□□□ -0.59
C9orf3-220ENST00000489318 PTRHD1Q6GMV3 140 aaKnown RBP11.35□□□□□ -0.59
C9orf3-220ENST00000489318 C16orf46Q6P387 395 aa11.35□□□□□ -0.59
C9orf3-220ENST00000489318 PAQR3Q6TCH7 311 aa11.35□□□□□ -0.59
C9orf3-220ENST00000489318 ADAMTSL4Q6UY14 1074 aa11.35□□□□□ -0.59
C9orf3-220ENST00000489318 PELI3Q8N2H9 469 aa11.35□□□□□ -0.59
C9orf3-220ENST00000489318 NKAPQ8N5F7 415 aaKnown RBP11.35□□□□□ -0.59
C9orf3-220ENST00000489318 CLDN19Q8N6F1 224 aa11.35□□□□□ -0.59
C9orf3-220ENST00000489318 TP53I13Q8NBR0 393 aaPredicted RBP11.35□□□□□ -0.59
C9orf3-220ENST00000489318 OR6Y1Q8NGX8 325 aa11.35□□□□□ -0.59
C9orf3-220ENST00000489318 RHEBL1Q8TAI7 183 aa11.35□□□□□ -0.59
C9orf3-220ENST00000489318 NXNL1Q96CM4 212 aa11.35□□□□□ -0.59
C9orf3-220ENST00000489318 CHMP6Q96FZ7 201 aa11.35□□□□□ -0.59
C9orf3-220ENST00000489318 COX14Q96I36 57 aa11.35□□□□□ -0.59
C9orf3-220ENST00000489318 PANX3Q96QZ0 392 aa11.35□□□□□ -0.59
C9orf3-220ENST00000489318 SLC30A3Q99726 388 aa11.35□□□□□ -0.59
C9orf3-220ENST00000489318 MRPL57Q9BQC6 102 aaKnown RBP11.35□□□□□ -0.59
C9orf3-220ENST00000489318 EPHX3Q9H6B9 360 aa11.35□□□□□ -0.59
C9orf3-220ENST00000489318 POLMQ9NP87 494 aaPredicted RBP11.35□□□□□ -0.59
C9orf3-220ENST00000489318 XPR1Q9UBH6 696 aa11.35□□□□□ -0.59
C9orf3-220ENST00000489318 TRMT6Q9UJA5 497 aaKnown RBP11.35□□□□□ -0.59
C9orf3-220ENST00000489318 DHRS7Q9Y394 339 aa11.35□□□□□ -0.59
C9orf3-220ENST00000489318 GMNCA6NCL1 334 aa11.34□□□□□ -0.59
C9orf3-220ENST00000489318 E5RI56 91 aa11.34□□□□□ -0.59
C9orf3-220ENST00000489318 K7ESM1 405 aa11.34□□□□□ -0.59
C9orf3-220ENST00000489318 MAGEC1O60732 1142 aa11.34□□□□□ -0.59
C9orf3-220ENST00000489318 DNAJC6O75061 913 aa11.34□□□□□ -0.59
C9orf3-220ENST00000489318 ATG13O75143 517 aa11.34□□□□□ -0.59
C9orf3-220ENST00000489318 RBP1P09455 135 aa11.34□□□□□ -0.59
C9orf3-220ENST00000489318 OR56A5P0C7T3 313 aa11.34□□□□□ -0.59
C9orf3-220ENST00000489318 RALBP11234 206 aa11.34□□□□□ -0.59
C9orf3-220ENST00000489318 ATP1B2P14415 290 aaPredicted RBP11.34□□□□□ -0.59
C9orf3-220ENST00000489318 GPR1P46091 355 aa11.34□□□□□ -0.59
C9orf3-220ENST00000489318 PRLHRP49683 370 aa11.34□□□□□ -0.59
C9orf3-220ENST00000489318 FGL2Q14314 439 aa11.34□□□□□ -0.59
C9orf3-220ENST00000489318 SEL1L3Q68CR1 1132 aa11.34□□□□□ -0.59
C9orf3-220ENST00000489318 RAET1GQ6H3X3 334 aa11.34□□□□□ -0.59
C9orf3-220ENST00000489318 KLC3Q6P597 504 aa11.34□□□□□ -0.59
C9orf3-220ENST00000489318 ZYG11AQ6WRX3 759 aa11.34□□□□□ -0.59
C9orf3-220ENST00000489318 ISCA2Q86U28 154 aa11.34□□□□□ -0.59
C9orf3-220ENST00000489318 TRIM69Q86WT6 500 aa11.34□□□□□ -0.59
C9orf3-220ENST00000489318 HORMAD1Q86X24 394 aa11.34□□□□□ -0.59
C9orf3-220ENST00000489318 TRIM42Q8IWZ5 723 aa11.34□□□□□ -0.59
C9orf3-220ENST00000489318 SIDT2Q8NBJ9 832 aaKnown RBP11.34□□□□□ -0.59
C9orf3-220ENST00000489318 INPP5DQ92835 1189 aa11.34□□□□□ -0.59
C9orf3-220ENST00000489318 CLDN23Q96B33 292 aa11.34□□□□□ -0.59
C9orf3-220ENST00000489318 FAM126AQ9BYI3 521 aaPredicted RBP11.34□□□□□ -0.59
C9orf3-220ENST00000489318 ZCCHC2Q9C0B9 1178 aaKnown RBP11.34□□□□□ -0.59
C9orf3-220ENST00000489318 CHRDQ9H2X0 955 aa11.34□□□□□ -0.59
C9orf3-220ENST00000489318 TFB2MQ9H5Q4 396 aaKnown RBP11.34□□□□□ -0.59
C9orf3-220ENST00000489318 LMAN1LQ9HAT1 526 aa11.34□□□□□ -0.59
C9orf3-220ENST00000489318 ITM2CQ9NQX7 267 aa11.34□□□□□ -0.59
C9orf3-220ENST00000489318 SPATS2LQ9NUQ6 558 aaKnown RBP11.34□□□□□ -0.59
C9orf3-220ENST00000489318 GALPQ9UBC7 116 aa11.34□□□□□ -0.59
C9orf3-220ENST00000489318 RUVBL2Q9Y230 463 aaKnown RBP11.34□□□□□ -0.59
C9orf3-220ENST00000489318 NCKAP1Q9Y2A7 1128 aa11.34□□□□□ -0.59
C9orf3-220ENST00000489318 LRP4O75096 1905 aa11.33□□□□□ -0.6
C9orf3-220ENST00000489318 A0A1W2PQU0 124 aa11.33□□□□□ -0.6
C9orf3-220ENST00000489318 IGLON5A6NGN9 336 aa11.33□□□□□ -0.6
C9orf3-220ENST00000489318 IQCF5A8MTL0 148 aa11.33□□□□□ -0.6
C9orf3-220ENST00000489318 F8W8V4 182 aa11.33□□□□□ -0.6
C9orf3-220ENST00000489318 RNGTTO60942 597 aaKnown RBP11.33□□□□□ -0.6
C9orf3-220ENST00000489318 PCDH8O95206 1070 aa11.33□□□□□ -0.6
C9orf3-220ENST00000489318 SLC25A14O95258 325 aaPredicted RBP11.33□□□□□ -0.6
C9orf3-220ENST00000489318 FAM107AO95990 144 aa11.33□□□□□ -0.6
C9orf3-220ENST00000489318 CBSLP0DN79 551 aa11.33□□□□□ -0.6
C9orf3-220ENST00000489318 ACADMP11310 421 aa11.33□□□□□ -0.6
C9orf3-220ENST00000489318 FGF3P11487 239 aaPredicted RBP11.33□□□□□ -0.6
C9orf3-220ENST00000489318 CPA3P15088 417 aa11.33□□□□□ -0.6
C9orf3-220ENST00000489318 TFEBP19484 476 aa11.33□□□□□ -0.6
C9orf3-220ENST00000489318 CHRM3P20309 590 aa11.33□□□□□ -0.6
C9orf3-220ENST00000489318 MSH3P20585 1137 aa11.33□□□□□ -0.6
C9orf3-220ENST00000489318 ALDH3A1P30838 453 aa11.33□□□□□ -0.6
C9orf3-220ENST00000489318 AKT1P31749 480 aa11.33□□□□□ -0.6
C9orf3-220ENST00000489318 CBSP35520 551 aa11.33□□□□□ -0.6
C9orf3-220ENST00000489318 TRIM23P36406 574 aa11.33□□□□□ -0.6
C9orf3-220ENST00000489318 RPS9P46781 194 aaKnown RBP11.33□□□□□ -0.6
C9orf3-220ENST00000489318 GLRBP48167 497 aa11.33□□□□□ -0.6
C9orf3-220ENST00000489318 TPMTP51580 245 aa11.33□□□□□ -0.6
C9orf3-220ENST00000489318 SEC24CP53992 1094 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms