RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 ZNF140P52738 457 aaPredicted RBP14.08□□□□□ -0.16
BRCA1-218ENST00000489037 OR1D5P58170 312 aa14.08□□□□□ -0.16
BRCA1-218ENST00000489037 GABREP78334 506 aa14.08□□□□□ -0.16
BRCA1-218ENST00000489037 HHEXQ03014 270 aa14.08□□□□□ -0.16
BRCA1-218ENST00000489037 POU6F1Q14863 301 aa14.08□□□□□ -0.16
BRCA1-218ENST00000489037 SIX1Q15475 284 aaPredicted RBP14.08□□□□□ -0.16
BRCA1-218ENST00000489037 SKIDA1Q1XH10 827 aa14.08□□□□□ -0.16
BRCA1-218ENST00000489037 AMZ1Q400G9 498 aa14.08□□□□□ -0.16
BRCA1-218ENST00000489037 C3orf38Q5JPI3 329 aa14.08□□□□□ -0.16
BRCA1-218ENST00000489037 GPRC6AQ5T6X5 926 aa14.08□□□□□ -0.16
BRCA1-218ENST00000489037 IYDQ6PHW0 289 aa14.08□□□□□ -0.16
BRCA1-218ENST00000489037 ZNF438Q7Z4V0 828 aa14.08□□□□□ -0.16
BRCA1-218ENST00000489037 TRIM48Q8IWZ4 208 aa14.08□□□□□ -0.16
BRCA1-218ENST00000489037 REXO1L1PQ8IX06 675 aa14.08□□□□□ -0.16
BRCA1-218ENST00000489037 SFRP1Q8N474 314 aa14.08□□□□□ -0.16
BRCA1-218ENST00000489037 OR13C4Q8NGS5 318 aa14.08□□□□□ -0.16
BRCA1-218ENST00000489037 WDR36Q8NI36 951 aaKnown RBP14.08□□□□□ -0.16
BRCA1-218ENST00000489037 SLC37A2Q8TED4 501 aa14.08□□□□□ -0.16
BRCA1-218ENST00000489037 STYXQ8WUJ0 223 aa14.08□□□□□ -0.16
BRCA1-218ENST00000489037 ATXN7L3BQ96GX2 97 aa14.08□□□□□ -0.16
BRCA1-218ENST00000489037 DPYSL5Q9BPU6 564 aa14.08□□□□□ -0.16
BRCA1-218ENST00000489037 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.08□□□□□ -0.16
BRCA1-218ENST00000489037 EPB41L5Q9HCM4 733 aa14.08□□□□□ -0.16
BRCA1-218ENST00000489037 TRMT1Q9NXH9 659 aaKnown RBP14.08□□□□□ -0.16
BRCA1-218ENST00000489037 KCNK4Q9NYG8 393 aa14.08□□□□□ -0.16
BRCA1-218ENST00000489037 AKAP7Q9P0M2 348 aaPredicted RBP14.08□□□□□ -0.16
BRCA1-218ENST00000489037 TMPRSS11EQ9UL52 423 aa14.08□□□□□ -0.16
BRCA1-218ENST00000489037 DNAJC16Q9Y2G8 782 aa14.08□□□□□ -0.16
BRCA1-218ENST00000489037 PCYT1BQ9Y5K3 369 aaPredicted RBP14.08□□□□□ -0.16
BRCA1-218ENST00000489037 DNMT3AQ9Y6K1 912 aaPredicted RBP14.08□□□□□ -0.16
BRCA1-218ENST00000489037 SPEGQ15772 3267 aa14.07□□□□□ -0.16
BRCA1-218ENST00000489037 SRRM3A6NNA2 597 aaPredicted RBP14.07□□□□□ -0.16
BRCA1-218ENST00000489037 CFAP99D6REC4 459 aa14.07□□□□□ -0.16
BRCA1-218ENST00000489037 PPM1DO15297 605 aa14.07□□□□□ -0.16
BRCA1-218ENST00000489037 LDB2O43679 373 aa14.07□□□□□ -0.16
BRCA1-218ENST00000489037 BRINP1O60477 761 aa14.07□□□□□ -0.16
BRCA1-218ENST00000489037 CPNE6O95741 557 aa14.07□□□□□ -0.16
BRCA1-218ENST00000489037 CAPNS1P04632 268 aa14.07□□□□□ -0.16
BRCA1-218ENST00000489037 MPOP05164 745 aa14.07□□□□□ -0.16
BRCA1-218ENST00000489037 APRTP07741 180 aa14.07□□□□□ -0.16
BRCA1-218ENST00000489037 ETS1P14921 441 aa14.07□□□□□ -0.16
BRCA1-218ENST00000489037 GPLD1P80108 840 aa14.07□□□□□ -0.16
BRCA1-218ENST00000489037 B4GALNT1Q00973 533 aa14.07□□□□□ -0.16
BRCA1-218ENST00000489037 EIF3IQ13347 325 aaKnown RBP14.07□□□□□ -0.16
BRCA1-218ENST00000489037 MSLNQ13421 630 aaPredicted RBP14.07□□□□□ -0.16
BRCA1-218ENST00000489037 NFATC2Q13469 925 aa14.07□□□□□ -0.16
BRCA1-218ENST00000489037 SEMA5AQ13591 1074 aa14.07□□□□□ -0.16
BRCA1-218ENST00000489037 NR1D2Q14995 579 aa14.07□□□□□ -0.16
BRCA1-218ENST00000489037 GPR33Q49SQ1 333 aa14.07□□□□□ -0.16
BRCA1-218ENST00000489037 KHDC1Q4VXA5 237 aaKnown RBP14.07□□□□□ -0.16
BRCA1-218ENST00000489037 FOXR1Q6PIV2 292 aa14.07□□□□□ -0.16
BRCA1-218ENST00000489037 TMEM220Q6QAJ8 160 aa14.07□□□□□ -0.16
BRCA1-218ENST00000489037 SNX20Q7Z614 316 aa14.07□□□□□ -0.16
BRCA1-218ENST00000489037 AMZ2Q86W34 360 aa14.07□□□□□ -0.16
BRCA1-218ENST00000489037 SLC35F6Q8N357 371 aa14.07□□□□□ -0.16
BRCA1-218ENST00000489037 OR52K1Q8NGK4 314 aa14.07□□□□□ -0.16
BRCA1-218ENST00000489037 OR10G6Q8NH81 332 aa14.07□□□□□ -0.16
BRCA1-218ENST00000489037 SARS2Q9NP81 518 aaKnown RBP14.07□□□□□ -0.16
BRCA1-218ENST00000489037 PRDM8Q9NQV8 689 aa14.07□□□□□ -0.16
BRCA1-218ENST00000489037 NLE1Q9NVX2 485 aaPredicted RBP14.07□□□□□ -0.16
BRCA1-218ENST00000489037 ATXN7L1Q9ULK2 861 aaPredicted RBP14.07□□□□□ -0.16
BRCA1-218ENST00000489037 SATB2Q9UPW6 733 aa14.07□□□□□ -0.16
BRCA1-218ENST00000489037 COL27A1Q8IZC6 1860 aaPredicted RBP14.07□□□□□ -0.16
BRCA1-218ENST00000489037 HEATR9A2RTY3 570 aa14.06□□□□□ -0.16
BRCA1-218ENST00000489037 KLHL33A6NCF5 533 aa14.06□□□□□ -0.16
BRCA1-218ENST00000489037 AP3B1O00203 1094 aa14.06□□□□□ -0.16
BRCA1-218ENST00000489037 GAPDHSO14556 408 aaPredicted RBP14.06□□□□□ -0.16
BRCA1-218ENST00000489037 B4GAT1O43505 415 aa14.06□□□□□ -0.16
BRCA1-218ENST00000489037 POP7O75817 140 aaKnown RBP14.06□□□□□ -0.16
BRCA1-218ENST00000489037 SUN1O94901 812 aa14.06□□□□□ -0.16
BRCA1-218ENST00000489037 VIPP01282 170 aa14.06□□□□□ -0.16
BRCA1-218ENST00000489037 CCKBRP32239 447 aa14.06□□□□□ -0.16
BRCA1-218ENST00000489037 MC4RP32245 332 aa14.06□□□□□ -0.16
BRCA1-218ENST00000489037 RPL22P35268 128 aaKnown RBP14.06□□□□□ -0.16
BRCA1-218ENST00000489037 HALP42357 657 aa14.06□□□□□ -0.16
BRCA1-218ENST00000489037 BASP1P80723 227 aaKnown RBP14.06□□□□□ -0.16
BRCA1-218ENST00000489037 XIAPP98170 497 aa14.06□□□□□ -0.16
BRCA1-218ENST00000489037 ZRANB3Q5FWF4 1079 aa14.06□□□□□ -0.16
BRCA1-218ENST00000489037 PHF19Q5T6S3 580 aa14.06□□□□□ -0.16
BRCA1-218ENST00000489037 LRRC69Q6ZNQ3 347 aa14.06□□□□□ -0.16
BRCA1-218ENST00000489037 USP53Q70EK8 1073 aa14.06□□□□□ -0.16
BRCA1-218ENST00000489037 TAS2R42Q7RTR8 314 aa14.06□□□□□ -0.16
BRCA1-218ENST00000489037 FBXO39Q8N4B4 442 aa14.06□□□□□ -0.16
BRCA1-218ENST00000489037 RASGEF1AQ8N9B8 481 aa14.06□□□□□ -0.16
BRCA1-218ENST00000489037 FGF11Q92914 225 aa14.06□□□□□ -0.16
BRCA1-218ENST00000489037 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.06□□□□□ -0.16
BRCA1-218ENST00000489037 TMEM159Q96B96 161 aa14.06□□□□□ -0.16
BRCA1-218ENST00000489037 LIN37Q96GY3 246 aaPredicted RBP14.06□□□□□ -0.16
BRCA1-218ENST00000489037 DNAJC1Q96KC8 554 aaKnown RBP14.06□□□□□ -0.16
BRCA1-218ENST00000489037 ZNF578Q96N58 590 aaPredicted RBP14.06□□□□□ -0.16
BRCA1-218ENST00000489037 COPS8Q99627 209 aa14.06□□□□□ -0.16
BRCA1-218ENST00000489037 FOXP3Q9BZS1 431 aa14.06□□□□□ -0.16
BRCA1-218ENST00000489037 KCNF1Q9H3M0 494 aa14.06□□□□□ -0.16
BRCA1-218ENST00000489037 THSD1Q9NS62 852 aa14.06□□□□□ -0.16
BRCA1-218ENST00000489037 PIH1D1Q9NWS0 290 aaKnown RBP14.06□□□□□ -0.16
BRCA1-218ENST00000489037 CPNE7Q9UBL6 633 aa14.06□□□□□ -0.16
BRCA1-218ENST00000489037 SLC23A2Q9UGH3 650 aa14.06□□□□□ -0.16
BRCA1-218ENST00000489037 USP24Q9UPU5 2620 aa14.06□□□□□ -0.16
BRCA1-218ENST00000489037 ANKRD11Q6UB99 2663 aaPredicted RBP14.06□□□□□ -0.16
BRCA1-218ENST00000489037 GOLGA6L10A0A0M3HER8 536 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms