RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 GABREP78334 506 aa15.71■□□□□ 0.11
CTDSP1-209ENST00000488627 CFHR1Q03591 330 aa15.71■□□□□ 0.11
CTDSP1-209ENST00000488627 NFATC2Q13469 925 aa15.71■□□□□ 0.11
CTDSP1-209ENST00000488627 LONRF2Q1L5Z9 754 aa15.71■□□□□ 0.11
CTDSP1-209ENST00000488627 ZNF574Q6ZN55 896 aaPredicted RBP15.71■□□□□ 0.11
CTDSP1-209ENST00000488627 LINC00523Q86TU6 105 aa15.71■□□□□ 0.11
CTDSP1-209ENST00000488627 SLITRK4Q8IW52 837 aa15.71■□□□□ 0.11
CTDSP1-209ENST00000488627 OR52K1Q8NGK4 314 aa15.71■□□□□ 0.11
CTDSP1-209ENST00000488627 MAIP1Q8WWC4 291 aa15.71■□□□□ 0.11
CTDSP1-209ENST00000488627 LRRC45Q96CN5 670 aa15.71■□□□□ 0.11
CTDSP1-209ENST00000488627 DNAJC1Q96KC8 554 aaKnown RBP15.71■□□□□ 0.11
CTDSP1-209ENST00000488627 FOXP3Q9BZS1 431 aa15.71■□□□□ 0.11
CTDSP1-209ENST00000488627 ASB8Q9H765 288 aa15.71■□□□□ 0.11
CTDSP1-209ENST00000488627 RAB6BQ9NRW1 208 aa15.71■□□□□ 0.11
CTDSP1-209ENST00000488627 SATB2Q9UPW6 733 aa15.71■□□□□ 0.11
CTDSP1-209ENST00000488627 IGHV1OR21-1A0A087WYE8 117 aa15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 KIR2DS5A0A0G2JLQ3 304 aa15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 A0A0G2JNG1 304 aa15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 H7C0S8 307 aa15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 KIR2DS3K7RE56 304 aa15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 CCL22O00626 93 aa15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 SGTAO43765 313 aa15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 SNX2O60749 519 aa15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 BRAFP15056 766 aa15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 CCKBRP32239 447 aa15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 HADHAP40939 763 aa15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 INHBCP55103 352 aa15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 TMPRSS15P98073 1019 aa15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 POU6F1Q14863 301 aa15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 KIR2DS5Q14953 304 aa15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 PLA2G4EQ3MJ16 856 aa15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 TMEM220Q6QAJ8 160 aa15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 IGF2-ASQ6U949 168 aa15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 ABRAXAS1Q6UWZ7 409 aa15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 USP53Q70EK8 1073 aa15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 SLC35F6Q8N357 371 aa15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 CCDC89Q8N998 374 aa15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 CCDC97Q96F63 343 aaPredicted RBP15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 LIN37Q96GY3 246 aaPredicted RBP15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 NUDT22Q9BRQ3 303 aa15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 RDH14Q9HBH5 336 aa15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 SARS2Q9NP81 518 aaKnown RBP15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 ASCL3Q9NQ33 180 aa15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 CASS4Q9NQ75 786 aa15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 NLE1Q9NVX2 485 aaPredicted RBP15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 TRMT1Q9NXH9 659 aaKnown RBP15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 PAK5Q9P286 719 aa15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 TTC7AQ9ULT0 858 aaPredicted RBP15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 PCDHGA8Q9Y5G5 932 aa15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 DNMT3AQ9Y6K1 912 aaPredicted RBP15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 URB1O60287 2271 aaKnown RBP15.7■□□□□ 0.1
CTDSP1-209ENST00000488627 TRBV5-4A0A0C4DH59 114 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 OR5K4A6NMS3 321 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 ZSCAN12O43309 604 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 POP7O75817 140 aaKnown RBP15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 CPNE6O95741 557 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 HOXB3P14651 431 aaPredicted RBP15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 CDKN1CP49918 316 aaPredicted RBP15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 UBE2IP63279 158 aaKnown RBP15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 HHEXQ03014 270 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 DMPKQ09013 629 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 CDH17Q12864 832 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 GTF2H3Q13889 308 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 CLPPQ16740 277 aaPredicted RBP15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 KCTD19Q17RG1 926 aaPredicted RBP15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 INSCQ1MX18 579 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 TBC1D25Q3MII6 688 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 AMZ1Q400G9 498 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 C3orf38Q5JPI3 329 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 NKAIN2Q5VXU1 208 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 XKR5Q6UX68 686 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 WASH2PQ6VEQ5 465 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 SNX20Q7Z614 316 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 ZNF761Q86XN6 746 aaPredicted RBP15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 TRAPPC5Q8IUR0 188 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 LSMEM2Q8N112 164 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 WDR36Q8NI36 951 aaKnown RBP15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 SNIP1Q8TAD8 396 aaKnown RBP15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 STYXQ8WUJ0 223 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 NAT14Q8WUY8 206 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 FGF11Q92914 225 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 SGF29Q96ES7 293 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 CDKN2AIPNLQ96HQ2 116 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 MS4A14Q96JA4 679 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 PBKQ96KB5 322 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 TTC25Q96NG3 672 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 TMEM74Q96NL1 305 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 SLC46A1Q96NT5 459 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 ZCCHC2Q9C0B9 1178 aaKnown RBP15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 SEMA6CQ9H3T2 930 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 OSGEPL1Q9H4B0 414 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 FAM96AQ9H5X1 160 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 WASH6PQ9NQA3 447 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 HOMER3Q9NSC5 361 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 ZNF624Q9P2J8 865 aaPredicted RBP15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 CPNE7Q9UBL6 633 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 DNAJC16Q9Y2G8 782 aa15.69■□□□□ 0.1
CTDSP1-209ENST00000488627 A0A087WV48 116 aa15.68■□□□□ 0.1
CTDSP1-209ENST00000488627 CCDC187A0A096LP49 1063 aa15.68■□□□□ 0.1
CTDSP1-209ENST00000488627 OR2AG2A6NM03 316 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms