RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 RASGEF1AQ8N9B8 481 aa14.85□□□□□ -0.03
CXCL12-207ENST00000488591 PEX13Q92968 403 aa14.85□□□□□ -0.03
CXCL12-207ENST00000488591 CCDC74AQ96AQ1 378 aa14.85□□□□□ -0.03
CXCL12-207ENST00000488591 COPS8Q99627 209 aa14.85□□□□□ -0.03
CXCL12-207ENST00000488591 CCDC3Q9BQI4 270 aa14.85□□□□□ -0.03
CXCL12-207ENST00000488591 TIMM29Q9BSF4 260 aa14.85□□□□□ -0.03
CXCL12-207ENST00000488591 DDX47Q9H0S4 455 aaKnown RBP14.85□□□□□ -0.03
CXCL12-207ENST00000488591 OSGEPL1Q9H4B0 414 aa14.85□□□□□ -0.03
CXCL12-207ENST00000488591 FAM96AQ9H5X1 160 aa14.85□□□□□ -0.03
CXCL12-207ENST00000488591 LRIT1Q9P2V4 623 aa14.85□□□□□ -0.03
CXCL12-207ENST00000488591 CLCA2Q9UQC9 943 aa14.85□□□□□ -0.03
CXCL12-207ENST00000488591 PCYT1BQ9Y5K3 369 aaPredicted RBP14.85□□□□□ -0.03
CXCL12-207ENST00000488591 DNMT3AQ9Y6K1 912 aaPredicted RBP14.85□□□□□ -0.03
CXCL12-207ENST00000488591 PTPRBP23467 1997 aa14.84□□□□□ -0.03
CXCL12-207ENST00000488591 OR5K4A6NMS3 321 aa14.84□□□□□ -0.03
CXCL12-207ENST00000488591 CCDC188H7C350 402 aa14.84□□□□□ -0.03
CXCL12-207ENST00000488591 MT-CO3P00414 261 aa14.84□□□□□ -0.03
CXCL12-207ENST00000488591 PSMA3P25788 255 aa14.84□□□□□ -0.03
CXCL12-207ENST00000488591 MAGEA6P43360 314 aa14.84□□□□□ -0.03
CXCL12-207ENST00000488591 PRAMEP78395 509 aa14.84□□□□□ -0.03
CXCL12-207ENST00000488591 KCNJ11Q14654 390 aa14.84□□□□□ -0.03
CXCL12-207ENST00000488591 PLA2G4EQ3MJ16 856 aa14.84□□□□□ -0.03
CXCL12-207ENST00000488591 CCNI2Q6ZMN8 369 aaPredicted RBP14.84□□□□□ -0.03
CXCL12-207ENST00000488591 NAGSQ8N159 534 aa14.84□□□□□ -0.03
CXCL12-207ENST00000488591 ARL14Q8N4G2 192 aa14.84□□□□□ -0.03
CXCL12-207ENST00000488591 AVL9Q8NBF6 648 aa14.84□□□□□ -0.03
CXCL12-207ENST00000488591 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.84□□□□□ -0.03
CXCL12-207ENST00000488591 DEPDC7Q96QD5 511 aa14.84□□□□□ -0.03
CXCL12-207ENST00000488591 TTC1Q99614 292 aa14.84□□□□□ -0.03
CXCL12-207ENST00000488591 STN1Q9H668 368 aaKnown RBP14.84□□□□□ -0.03
CXCL12-207ENST00000488591 SYNDIG1Q9H7V2 258 aa14.84□□□□□ -0.03
CXCL12-207ENST00000488591 TBC1D29Q9UFV1 150 aa14.84□□□□□ -0.03
CXCL12-207ENST00000488591 PCYOX1Q9UHG3 505 aa14.84□□□□□ -0.03
CXCL12-207ENST00000488591 DNAJC16Q9Y2G8 782 aa14.84□□□□□ -0.03
CXCL12-207ENST00000488591 NEU2Q9Y3R4 380 aa14.84□□□□□ -0.03
CXCL12-207ENST00000488591 TCAF1Q9Y4C2 921 aa14.84□□□□□ -0.03
CXCL12-207ENST00000488591 RNF215Q9Y6U7 377 aa14.84□□□□□ -0.03
CXCL12-207ENST00000488591 MYLKQ15746 1914 aa14.84□□□□□ -0.03
CXCL12-207ENST00000488591 ARHGEF17Q96PE2 2063 aaPredicted RBP14.83□□□□□ -0.03
CXCL12-207ENST00000488591 TRBV23OR9-2A0A075B6M9 112 aa14.83□□□□□ -0.04
CXCL12-207ENST00000488591 FAM149AA5PLN7 773 aa14.83□□□□□ -0.04
CXCL12-207ENST00000488591 KLHL33A6NCF5 533 aa14.83□□□□□ -0.04
CXCL12-207ENST00000488591 OR2AG2A6NM03 316 aa14.83□□□□□ -0.04
CXCL12-207ENST00000488591 TCEA3O75764 348 aa14.83□□□□□ -0.04
CXCL12-207ENST00000488591 POP7O75817 140 aaKnown RBP14.83□□□□□ -0.04
CXCL12-207ENST00000488591 IDSP22304 550 aa14.83□□□□□ -0.04
CXCL12-207ENST00000488591 ACRV1P26436 265 aa14.83□□□□□ -0.04
CXCL12-207ENST00000488591 CA5AP35218 305 aa14.83□□□□□ -0.04
CXCL12-207ENST00000488591 MAZP56270 477 aaKnown RBP14.83□□□□□ -0.04
CXCL12-207ENST00000488591 FNBP1LQ5T0N5 605 aa14.83□□□□□ -0.04
CXCL12-207ENST00000488591 LYPLAL1Q5VWZ2 237 aa14.83□□□□□ -0.04
CXCL12-207ENST00000488591 AFTPHQ6ULP2 937 aa14.83□□□□□ -0.04
CXCL12-207ENST00000488591 SYT10Q6XYQ8 523 aa14.83□□□□□ -0.04
CXCL12-207ENST00000488591 SYDE1Q6ZW31 735 aaPredicted RBP14.83□□□□□ -0.04
CXCL12-207ENST00000488591 DET1Q7L5Y6 550 aa14.83□□□□□ -0.04
CXCL12-207ENST00000488591 PCGF5Q86SE9 256 aa14.83□□□□□ -0.04
CXCL12-207ENST00000488591 AMZ2Q86W34 360 aa14.83□□□□□ -0.04
CXCL12-207ENST00000488591 SERPINA9Q86WD7 417 aa14.83□□□□□ -0.04
CXCL12-207ENST00000488591 C17orf82Q86X59 251 aaPredicted RBP14.83□□□□□ -0.04
CXCL12-207ENST00000488591 ZNF547Q8IVP9 402 aa14.83□□□□□ -0.04
CXCL12-207ENST00000488591 SFTPA2Q8IWL1 248 aa14.83□□□□□ -0.04
CXCL12-207ENST00000488591 KLHL7Q8IXQ5 586 aa14.83□□□□□ -0.04
CXCL12-207ENST00000488591 Q8N9G6 341 aaPredicted RBP14.83□□□□□ -0.04
CXCL12-207ENST00000488591 OR6P1Q8NGX9 317 aa14.83□□□□□ -0.04
CXCL12-207ENST00000488591 CPT1BQ92523 772 aa14.83□□□□□ -0.04
CXCL12-207ENST00000488591 SLCO2A1Q92959 643 aa14.83□□□□□ -0.04
CXCL12-207ENST00000488591 HDAC10Q969S8 669 aa14.83□□□□□ -0.04
CXCL12-207ENST00000488591 SGF29Q96ES7 293 aa14.83□□□□□ -0.04
CXCL12-207ENST00000488591 XAB2Q9HCS7 855 aaKnown RBP14.83□□□□□ -0.04
CXCL12-207ENST00000488591 CHRAC1Q9NRG0 131 aa14.83□□□□□ -0.04
CXCL12-207ENST00000488591 ZDHHC3Q9NYG2 299 aa14.83□□□□□ -0.04
CXCL12-207ENST00000488591 SLC23A2Q9UGH3 650 aa14.83□□□□□ -0.04
CXCL12-207ENST00000488591 ASIC3Q9UHC3 531 aa14.83□□□□□ -0.04
CXCL12-207ENST00000488591 ZFC3H1O60293 1989 aaKnown RBP14.83□□□□□ -0.04
CXCL12-207ENST00000488591 PLXNB3Q9ULL4 1909 aa14.82□□□□□ -0.04
CXCL12-207ENST00000488591 TRBV5-4A0A0C4DH59 114 aa14.82□□□□□ -0.04
CXCL12-207ENST00000488591 KIR2DS5A0A0G2JLQ3 304 aa14.82□□□□□ -0.04
CXCL12-207ENST00000488591 A0A0G2JNG1 304 aa14.82□□□□□ -0.04
CXCL12-207ENST00000488591 TCRBV7S3A2A0A539 114 aa14.82□□□□□ -0.04
CXCL12-207ENST00000488591 CCDC162PA2VCL2 907 aa14.82□□□□□ -0.04
CXCL12-207ENST00000488591 PDZK1P1A8MUH7 402 aa14.82□□□□□ -0.04
CXCL12-207ENST00000488591 KIR2DS3K7RE56 304 aa14.82□□□□□ -0.04
CXCL12-207ENST00000488591 RPLP0P05388 317 aaKnown RBP14.82□□□□□ -0.04
CXCL12-207ENST00000488591 MLNP12872 115 aa14.82□□□□□ -0.04
CXCL12-207ENST00000488591 F3P13726 295 aa14.82□□□□□ -0.04
CXCL12-207ENST00000488591 ATP1B2P14415 290 aaPredicted RBP14.82□□□□□ -0.04
CXCL12-207ENST00000488591 MGAT1P26572 445 aa14.82□□□□□ -0.04
CXCL12-207ENST00000488591 PPARGP37231 505 aaPredicted RBP14.82□□□□□ -0.04
CXCL12-207ENST00000488591 ARSDP51689 593 aa14.82□□□□□ -0.04
CXCL12-207ENST00000488591 CTSCP53634 463 aa14.82□□□□□ -0.04
CXCL12-207ENST00000488591 TARDBPQ13148 414 aaKnown RBP eCLIP14.82□□□□□ -0.04
CXCL12-207ENST00000488591 PTK6Q13882 451 aa14.82□□□□□ -0.04
CXCL12-207ENST00000488591 SPIDRQ14159 915 aa14.82□□□□□ -0.04
CXCL12-207ENST00000488591 KIR2DS5Q14953 304 aa14.82□□□□□ -0.04
CXCL12-207ENST00000488591 KCTD19Q17RG1 926 aaPredicted RBP14.82□□□□□ -0.04
CXCL12-207ENST00000488591 CDCP2Q5VXM1 449 aa14.82□□□□□ -0.04
CXCL12-207ENST00000488591 ARMC3Q5W041 872 aa14.82□□□□□ -0.04
CXCL12-207ENST00000488591 IYDQ6PHW0 289 aa14.82□□□□□ -0.04
CXCL12-207ENST00000488591 RBM44Q6ZP01 1051 aaKnown RBP14.82□□□□□ -0.04
CXCL12-207ENST00000488591 SLC9B2Q86UD5 537 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms