RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 DLK1P80370 383 aa2.72□□□□□ -1.97
SMC4-220ENST00000488017 COX10Q12887 443 aa2.72□□□□□ -1.97
SMC4-220ENST00000488017 ELAVL2Q12926 359 aaKnown RBP2.72□□□□□ -1.97
SMC4-220ENST00000488017 GRAPQ13588 217 aa2.72□□□□□ -1.97
SMC4-220ENST00000488017 C6orf141Q5SZD1 244 aa2.72□□□□□ -1.97
SMC4-220ENST00000488017 ARHGEF16Q5VV41 709 aa2.72□□□□□ -1.97
SMC4-220ENST00000488017 GPRIN3Q6ZVF9 776 aa2.72□□□□□ -1.97
SMC4-220ENST00000488017 STAMQ92783 540 aa2.72□□□□□ -1.97
SMC4-220ENST00000488017 HSPB7Q9UBY9 170 aa2.72□□□□□ -1.97
SMC4-220ENST00000488017 DNAJB4Q9UDY4 337 aa2.72□□□□□ -1.97
SMC4-220ENST00000488017 EPHA6Q9UF33 1036 aa2.72□□□□□ -1.97
SMC4-220ENST00000488017 FEM1BQ9UK73 627 aa2.72□□□□□ -1.97
SMC4-220ENST00000488017 KPNA7A9QM74 516 aa2.71□□□□□ -1.98
SMC4-220ENST00000488017 PLK4O00444 970 aa2.71□□□□□ -1.98
SMC4-220ENST00000488017 CSPG5O95196 566 aa2.71□□□□□ -1.98
SMC4-220ENST00000488017 NGFP01138 241 aa2.71□□□□□ -1.98
SMC4-220ENST00000488017 CAPN2P17655 700 aa2.71□□□□□ -1.98
SMC4-220ENST00000488017 UGT1A4P22310 534 aa2.71□□□□□ -1.98
SMC4-220ENST00000488017 SERPINB3P29508 390 aa2.71□□□□□ -1.98
SMC4-220ENST00000488017 HNF4AP41235 474 aa2.71□□□□□ -1.98
SMC4-220ENST00000488017 LIMK2P53671 638 aa2.71□□□□□ -1.98
SMC4-220ENST00000488017 TAF1BQ53T94 588 aaPredicted RBP2.71□□□□□ -1.98
SMC4-220ENST00000488017 MOGAT3Q86VF5 341 aa2.71□□□□□ -1.98
SMC4-220ENST00000488017 MYLK4Q86YV6 388 aaPredicted RBP2.71□□□□□ -1.98
SMC4-220ENST00000488017 SUGP1Q8IWZ8 645 aaKnown RBP2.71□□□□□ -1.98
SMC4-220ENST00000488017 CCDC146Q8IYE0 955 aa2.71□□□□□ -1.98
SMC4-220ENST00000488017 RASL10AQ92737 203 aa2.71□□□□□ -1.98
SMC4-220ENST00000488017 PHF7Q9BWX1 381 aaPredicted RBP2.71□□□□□ -1.98
SMC4-220ENST00000488017 USP44Q9H0E7 712 aa2.71□□□□□ -1.98
SMC4-220ENST00000488017 CHST11Q9NPF2 352 aa2.71□□□□□ -1.98
SMC4-220ENST00000488017 COQ3Q9NZJ6 369 aa2.71□□□□□ -1.98
SMC4-220ENST00000488017 KLHL9Q9P2J3 617 aa2.71□□□□□ -1.98
SMC4-220ENST00000488017 A4GNTQ9UNA3 340 aa2.71□□□□□ -1.98
SMC4-220ENST00000488017 PRAG1Q86YV5 1406 aa2.7□□□□□ -1.98
SMC4-220ENST00000488017 B9A039 149 aa2.7□□□□□ -1.98
SMC4-220ENST00000488017 IRAK2O43187 625 aa2.7□□□□□ -1.98
SMC4-220ENST00000488017 URODP06132 367 aa2.7□□□□□ -1.98
SMC4-220ENST00000488017 EPHA2P29317 976 aa2.7□□□□□ -1.98
SMC4-220ENST00000488017 FAM198BQ6UWH4 519 aa2.7□□□□□ -1.98
SMC4-220ENST00000488017 DPPA4Q7L190 304 aa2.7□□□□□ -1.98
SMC4-220ENST00000488017 OR2T12Q8NG77 320 aa2.7□□□□□ -1.98
SMC4-220ENST00000488017 TRAPPC12Q8WVT3 735 aa2.7□□□□□ -1.98
SMC4-220ENST00000488017 TMEM143Q96AN5 459 aa2.7□□□□□ -1.98
SMC4-220ENST00000488017 ELP4Q96EB1 424 aa2.7□□□□□ -1.98
SMC4-220ENST00000488017 MAGED4Q96JG8 741 aa2.7□□□□□ -1.98
SMC4-220ENST00000488017 SLX1AQ9BQ83 275 aa2.7□□□□□ -1.98
SMC4-220ENST00000488017 PCGF1Q9BSM1 259 aa2.7□□□□□ -1.98
SMC4-220ENST00000488017 PAGR1Q9BTK6 254 aa2.7□□□□□ -1.98
SMC4-220ENST00000488017 HEMGNQ9BXL5 484 aa2.7□□□□□ -1.98
SMC4-220ENST00000488017 PLCB1Q9NQ66 1216 aa2.7□□□□□ -1.98
SMC4-220ENST00000488017 GPR83Q9NYM4 423 aa2.7□□□□□ -1.98
SMC4-220ENST00000488017 HCN3Q9P1Z3 774 aa2.7□□□□□ -1.98
SMC4-220ENST00000488017 LIMA1Q9UHB6 759 aaKnown RBP2.7□□□□□ -1.98
SMC4-220ENST00000488017 SCINQ9Y6U3 715 aa2.7□□□□□ -1.98
SMC4-220ENST00000488017 SOS1Q07889 1333 aaPredicted RBP2.69□□□□□ -1.98
SMC4-220ENST00000488017 C15orf62A8K5M9 175 aa2.69□□□□□ -1.98
SMC4-220ENST00000488017 DUS4LO95620 317 aaKnown RBP2.69□□□□□ -1.98
SMC4-220ENST00000488017 UBA1P22314 1058 aaKnown RBP2.69□□□□□ -1.98
SMC4-220ENST00000488017 BRD3Q15059 726 aa2.69□□□□□ -1.98
SMC4-220ENST00000488017 WDR45BQ5MNZ6 344 aa2.69□□□□□ -1.98
SMC4-220ENST00000488017 PSRC1Q6PGN9 363 aaPredicted RBP2.69□□□□□ -1.98
SMC4-220ENST00000488017 C1orf228Q6PIY5 440 aa2.69□□□□□ -1.98
SMC4-220ENST00000488017 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.69□□□□□ -1.98
SMC4-220ENST00000488017 FTSJ3Q8IY81 847 aaKnown RBP2.69□□□□□ -1.98
SMC4-220ENST00000488017 FGFRL1Q8N441 504 aa2.69□□□□□ -1.98
SMC4-220ENST00000488017 Q8N7P7 452 aa2.69□□□□□ -1.98
SMC4-220ENST00000488017 RILPL2Q969X0 211 aa2.69□□□□□ -1.98
SMC4-220ENST00000488017 SLC47A1Q96FL8 570 aa2.69□□□□□ -1.98
SMC4-220ENST00000488017 ACOX2Q99424 681 aa2.69□□□□□ -1.98
SMC4-220ENST00000488017 SOSTQ9BQB4 213 aa2.69□□□□□ -1.98
SMC4-220ENST00000488017 TMEM47Q9BQJ4 181 aa2.69□□□□□ -1.98
SMC4-220ENST00000488017 P2RY12Q9H244 342 aa2.69□□□□□ -1.98
SMC4-220ENST00000488017 RABGAP1Q9Y3P9 1069 aa2.69□□□□□ -1.98
SMC4-220ENST00000488017 IGHV4-61A0A0C4DH41 118 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 A0A1W2PPR1 153 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 GAGE10A6NGK3 116 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 M0QZ24 198 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 NBNO60934 754 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 WISP2O76076 250 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 IGHV4-59P01825 116 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 LIPFP07098 398 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 HMGB1P09429 215 aaKnown RBP2.68□□□□□ -1.98
SMC4-220ENST00000488017 SP3Q02447 781 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 PRKG1Q13976 671 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 UBE4AQ14139 1066 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 MORC3Q14149 939 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 SGSM1Q2NKQ1 1148 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 ANKRD45Q5TZF3 282 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 LCN10Q6JVE6 187 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 RRM2BQ7LG56 351 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 ATG9AQ7Z3C6 839 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 PLD3Q8IV08 490 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 LSMEM2Q8N112 164 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 GBGT1Q8N5D6 347 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 SAMD3Q8N6K7 520 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 PRSS33Q8NF86 280 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 UTP15Q8TED0 518 aaKnown RBP2.68□□□□□ -1.98
SMC4-220ENST00000488017 PABPC5Q96DU9 382 aaKnown RBP2.68□□□□□ -1.98
SMC4-220ENST00000488017 NSMCE3Q96MG7 304 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 COG8Q96MW5 612 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms