RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 INSL5Q9Y5Q6 135 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 KNL1Q8NG31 2342 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 PCNX1Q96RV3 2341 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 MED13Q9UHV7 2174 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 TRBV5-3A0A0A0MS03 114 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 PMM2O15305 246 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 CTIFO43310 598 aaKnown RBP4.86□□□□□ -1.63
BRCA1-217ENST00000487825 SYF2O95926 243 aaKnown RBP4.86□□□□□ -1.63
BRCA1-217ENST00000487825 ENO1P06733 434 aaKnown RBP4.86□□□□□ -1.63
BRCA1-217ENST00000487825 FGF2P09038 288 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 ZNF883P0CG24 379 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 HARSP12081 509 aaKnown RBP4.86□□□□□ -1.63
BRCA1-217ENST00000487825 MCM2P49736 904 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 THBS3P49746 956 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 UCNP55089 124 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 ROR1Q01973 937 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 PRKCEQ02156 737 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 RUNX3Q13761 415 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 SAFBQ15424 915 aaKnown RBP eCLIP4.86□□□□□ -1.63
BRCA1-217ENST00000487825 UBE2SQ16763 222 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 MIDNQ504T8 468 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 KLHL22Q53GT1 634 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 LIPMQ5VYY2 423 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 SLC8B1Q6J4K2 584 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 HIBCHQ6NVY1 386 aaPredicted RBP4.86□□□□□ -1.63
BRCA1-217ENST00000487825 CRELD2Q6UXH1 353 aaPredicted RBP4.86□□□□□ -1.63
BRCA1-217ENST00000487825 TMPRSS12Q86WS5 348 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 ERICH1Q86X53 443 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 SMAP1Q8IYB5 467 aaPredicted RBP4.86□□□□□ -1.63
BRCA1-217ENST00000487825 PELI3Q8N2H9 469 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 ELMOD1Q8N336 334 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 FRMD1Q8N878 549 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 ARL14EPQ8N8R7 260 aaPredicted RBP4.86□□□□□ -1.63
BRCA1-217ENST00000487825 ACRBPQ8NEB7 543 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 SETD7Q8WTS6 366 aaKnown RBP4.86□□□□□ -1.63
BRCA1-217ENST00000487825 RLN3Q8WXF3 142 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 ASB12Q8WXK4 309 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 WASF1Q92558 559 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 FGF11Q92914 225 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 ZNF845Q96IR2 970 aaPredicted RBP4.86□□□□□ -1.63
BRCA1-217ENST00000487825 POLR3CQ9BUI4 534 aaPredicted RBP4.86□□□□□ -1.63
BRCA1-217ENST00000487825 SARGQ9BW04 601 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 NAA15Q9BXJ9 866 aaKnown RBP4.86□□□□□ -1.63
BRCA1-217ENST00000487825 EIF2AQ9BY44 585 aaKnown RBP4.86□□□□□ -1.63
BRCA1-217ENST00000487825 AAMDCQ9H7C9 122 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 PSTPIP2Q9H939 334 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 HPS4Q9NQG7 708 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 RGL1Q9NZL6 768 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 HES2Q9Y543 173 aa4.86□□□□□ -1.63
BRCA1-217ENST00000487825 LRRK1Q38SD2 2015 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 FAM234BA2RU67 622 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 CASTOR2A6NHX0 329 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 IPO5O00410 1097 aaKnown RBP4.85□□□□□ -1.63
BRCA1-217ENST00000487825 FLRT2O43155 660 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 AP5Z1O43299 807 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 SEC24AO95486 1093 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 PRAMEF12O95522 483 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 ELF1P32519 619 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 ZNF33AQ06730 810 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 CCDC173Q0VFZ6 552 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 GRIK2Q13002 908 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 ANXA2RQ3ZCQ2 193 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 FAM209BQ5JX69 171 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 STXBP5Q5T5C0 1151 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 C16orf89Q6UX73 402 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 RFX8Q6ZV50 586 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 B4GALNT4Q76KP1 1039 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 MEPCEQ7L2J0 689 aaKnown RBP4.85□□□□□ -1.63
BRCA1-217ENST00000487825 NIPA1Q7RTP0 329 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 GLMPQ8WWB7 406 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 EXOC4Q96A65 974 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 MSI2Q96DH6 328 aaKnown RBP4.85□□□□□ -1.63
BRCA1-217ENST00000487825 CCDC51Q96ER9 411 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 GPR78Q96P69 363 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 P2RY13Q9BPV8 354 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 UBAC1Q9BSL1 405 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 SPZ1Q9BXG8 430 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 NXF3Q9H4D5 531 aaKnown RBP4.85□□□□□ -1.63
BRCA1-217ENST00000487825 MINDY3Q9H8M7 445 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 PRDM16Q9HAZ2 1276 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 HELLSQ9NRZ9 838 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 THSD1Q9NS62 852 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 DECR2Q9NUI1 292 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 SUCLA2Q9P2R7 463 aaPredicted RBP4.85□□□□□ -1.63
BRCA1-217ENST00000487825 UTS2RQ9UKP6 389 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 AGO2Q9UKV8 859 aaKnown RBP4.85□□□□□ -1.63
BRCA1-217ENST00000487825 MMP17Q9ULZ9 603 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 TBX20Q9UMR3 447 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 PCDHA12Q9UN75 941 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 PCDHA10Q9Y5I2 948 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 TTC41PQ6P2S7 1318 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 MED13LQ71F56 2210 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 PDZD2O15018 2839 aa4.85□□□□□ -1.63
BRCA1-217ENST00000487825 A0A0D9SFI3 127 aa4.84□□□□□ -1.63
BRCA1-217ENST00000487825 OR2W5A6NFC9 320 aa4.84□□□□□ -1.63
BRCA1-217ENST00000487825 FAM90A8PA6NJQ4 464 aa4.84□□□□□ -1.63
BRCA1-217ENST00000487825 TMEM189-UBE2V1I3L0A0 370 aa4.84□□□□□ -1.63
BRCA1-217ENST00000487825 J3KTA2 159 aa4.84□□□□□ -1.63
BRCA1-217ENST00000487825 PRPF4O43172 522 aaKnown RBP eCLIP4.84□□□□□ -1.63
BRCA1-217ENST00000487825 TNFSF14O43557 240 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms