RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 PNPOQ9NVS9 261 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 RAP2CQ9Y3L5 183 aa9.34□□□□□ -0.91
SF3B1-211ENST00000487698 NPEPPSL1A6NEC2 478 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 FADS2P1A8MWK0 482 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 C2CD4DB7Z1M9 353 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 C1QTNF3-AMACRE9PGA6 284 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 SPECC1L-ADORA2AF8WAN1 911 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 CDC7O00311 574 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 PLK4O00444 970 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 KLK8O60259 260 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 UBOX5O94941 541 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 SNUPNO95149 360 aaKnown RBP9.33□□□□□ -0.92
SF3B1-211ENST00000487698 KITP10721 976 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 CTHP32929 405 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 CCR10P46092 362 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 LIG3P49916 1009 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 AQP5P55064 265 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 CREB5Q02930 508 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 TSNQ15631 228 aaKnown RBP9.33□□□□□ -0.92
SF3B1-211ENST00000487698 TMEM52BQ4KMG9 183 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 SPDYAQ5MJ70 313 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 FBXL19Q6PCT2 694 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 ERN2Q76MJ5 926 aaKnown RBP9.33□□□□□ -0.92
SF3B1-211ENST00000487698 WDR75Q8IWA0 830 aaKnown RBP9.33□□□□□ -0.92
SF3B1-211ENST00000487698 MICALL1Q8N3F8 863 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 ZNF513Q8N8E2 541 aaPredicted RBP9.33□□□□□ -0.92
SF3B1-211ENST00000487698 DDHD1Q8NEL9 900 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 STAG3L4Q8TBR4 150 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 INPP5DQ92835 1189 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 FUBP1Q96AE4 644 aaKnown RBP9.33□□□□□ -0.92
SF3B1-211ENST00000487698 DTD2Q96FN9 168 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 LRRC37BQ96QE4 947 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 VPS35Q96QK1 796 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 RIOK2Q9BVS4 552 aaKnown RBP9.33□□□□□ -0.92
SF3B1-211ENST00000487698 MYLK2Q9H1R3 596 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 RSPH9Q9H1X1 276 aaPredicted RBP9.33□□□□□ -0.92
SF3B1-211ENST00000487698 ABCG8Q9H221 673 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 STN1Q9H668 368 aaKnown RBP9.33□□□□□ -0.92
SF3B1-211ENST00000487698 CYP4F12Q9HCS2 524 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 NCKIPSDQ9NZQ3 722 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 MBD1Q9UIS9 605 aaPredicted RBP9.33□□□□□ -0.92
SF3B1-211ENST00000487698 SLC12A4Q9UP95 1085 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 TRPM6Q9BX84 2022 aa9.33□□□□□ -0.92
SF3B1-211ENST00000487698 UBXN8O00124 270 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 BTN3A1O00481 513 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 SMIM24O75264 130 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 SLC25A14O95258 325 aaPredicted RBP9.32□□□□□ -0.92
SF3B1-211ENST00000487698 TPBGLP0DKB5 382 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 IMPDH1P20839 514 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 MPSTP25325 297 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 DRD3P35462 400 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 P2RY2P41231 377 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 PSMD8P48556 350 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 HK2P52789 917 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 HERVK_113P63132 956 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 PRKAA1Q13131 559 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 TUBB3Q13509 450 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 E2F5Q15329 346 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 C2orf27AQ580R0 203 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 ZNF678Q5SXM1 525 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 PIP5KL1Q5T9C9 394 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 FRMD7Q6ZUT3 714 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 ZNF765Q7L2R6 523 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 CHPFQ8IZ52 775 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 CCNYL1Q8N7R7 359 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 ERP27Q96DN0 273 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 CNDP1Q96KN2 507 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 WRAP53Q9BUR4 548 aaKnown RBP9.32□□□□□ -0.92
SF3B1-211ENST00000487698 ERVK-6Q9BXR3 956 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 ILKAPQ9H0C8 392 aaPredicted RBP9.32□□□□□ -0.92
SF3B1-211ENST00000487698 WWP1Q9H0M0 922 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 GSTO2Q9H4Y5 243 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 SARS2Q9NP81 518 aaKnown RBP9.32□□□□□ -0.92
SF3B1-211ENST00000487698 DNAJC28Q9NX36 388 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 KLHL42Q9P2K6 505 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.32□□□□□ -0.92
SF3B1-211ENST00000487698 RRP15Q9Y3B9 282 aaKnown RBP9.32□□□□□ -0.92
SF3B1-211ENST00000487698 DOCK9Q9BZ29 2069 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 SOX1O00570 391 aaPredicted RBP9.32□□□□□ -0.92
SF3B1-211ENST00000487698 WNT9AO14904 365 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 SGTAO43765 313 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 SOD1P00441 154 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 SERPINB3P29508 390 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 GALNT1Q10472 559 aaPredicted RBP9.32□□□□□ -0.92
SF3B1-211ENST00000487698 CNTN1Q12860 1018 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 BNIP1Q12981 228 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 SMAD4Q13485 552 aaKnown RBP9.32□□□□□ -0.92
SF3B1-211ENST00000487698 GBX1Q14549 363 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 SETDB1Q15047 1291 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 ACOX1Q15067 660 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 CRY1Q16526 586 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 ZNF284Q2VY69 593 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 KHDC1Q4VXA5 237 aaKnown RBP9.32□□□□□ -0.92
SF3B1-211ENST00000487698 FAM46CQ5VWP2 391 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 CLNKQ7Z7G1 428 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 ZBTB2Q8N680 514 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 PTGR2Q8N8N7 351 aaPredicted RBP9.32□□□□□ -0.92
SF3B1-211ENST00000487698 RAB7BQ96AH8 199 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 PHF21BQ96EK2 531 aa9.32□□□□□ -0.92
SF3B1-211ENST00000487698 GABRG3Q99928 467 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms