RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 TICAM1Q8IUC6 712 aa15.09■□□□□ 0.01
MCF2L-228ENST00000487354 NDUFAF2Q8N183 169 aa15.09■□□□□ 0.01
MCF2L-228ENST00000487354 FAM71BQ8TC56 605 aa15.09■□□□□ 0.01
MCF2L-228ENST00000487354 LRRN4Q8WUT4 740 aa15.09■□□□□ 0.01
MCF2L-228ENST00000487354 NSMCE1Q8WV22 266 aa15.09■□□□□ 0.01
MCF2L-228ENST00000487354 PCMTD1Q96MG8 357 aaPredicted RBP15.09■□□□□ 0.01
MCF2L-228ENST00000487354 RAB33BQ9H082 229 aa15.09■□□□□ 0.01
MCF2L-228ENST00000487354 PCDH9Q9HC56 1237 aa15.09■□□□□ 0.01
MCF2L-228ENST00000487354 CASS4Q9NQ75 786 aa15.09■□□□□ 0.01
MCF2L-228ENST00000487354 POT1Q9NUX5 634 aa15.09■□□□□ 0.01
MCF2L-228ENST00000487354 LUZP4Q9P127 313 aa15.09■□□□□ 0.01
MCF2L-228ENST00000487354 ERRFI1Q9UJM3 462 aaPredicted RBP15.09■□□□□ 0.01
MCF2L-228ENST00000487354 RPL26L1Q9UNX3 145 aaKnown RBP15.09■□□□□ 0.01
MCF2L-228ENST00000487354 CROCCQ5TZA2 2017 aa15.09■□□□□ 0.01
MCF2L-228ENST00000487354 LRRC10BA6NIK2 292 aa15.08■□□□□ 0
MCF2L-228ENST00000487354 ARGFXA6NJG6 315 aa15.08■□□□□ 0
MCF2L-228ENST00000487354 DDX3XO00571 662 aaKnown RBP eCLIP15.08■□□□□ 0
MCF2L-228ENST00000487354 DDAH2O95865 285 aa15.08■□□□□ 0
MCF2L-228ENST00000487354 LDLRP01130 860 aa15.08■□□□□ 0
MCF2L-228ENST00000487354 FTLP02792 175 aaPredicted RBP15.08■□□□□ 0
MCF2L-228ENST00000487354 MT-ND3P03897 115 aa15.08■□□□□ 0
MCF2L-228ENST00000487354 CCNYL3P0C7X3 344 aa15.08■□□□□ 0
MCF2L-228ENST00000487354 AMD1P17707 334 aa15.08■□□□□ 0
MCF2L-228ENST00000487354 PTPN4P29074 926 aa15.08■□□□□ 0
MCF2L-228ENST00000487354 SERPINB6P35237 376 aa15.08■□□□□ 0
MCF2L-228ENST00000487354 PTGIRP43119 386 aa15.08■□□□□ 0
MCF2L-228ENST00000487354 ARSEP51690 589 aa15.08■□□□□ 0
MCF2L-228ENST00000487354 ITKQ08881 620 aa15.08■□□□□ 0
MCF2L-228ENST00000487354 BOLA3Q53S33 107 aa15.08■□□□□ 0
MCF2L-228ENST00000487354 NCBP2-AS2Q69YL0 99 aa15.08■□□□□ 0
MCF2L-228ENST00000487354 PPP1R2P3Q6NXS1 205 aa15.08■□□□□ 0
MCF2L-228ENST00000487354 JMJD6Q6NYC1 403 aaPredicted RBP15.08■□□□□ 0
MCF2L-228ENST00000487354 ABRAXAS1Q6UWZ7 409 aa15.08■□□□□ 0
MCF2L-228ENST00000487354 MAMDC2Q7Z304 686 aaPredicted RBP15.08■□□□□ 0
MCF2L-228ENST00000487354 C11orf96Q7Z7L8 435 aa15.08■□□□□ 0
MCF2L-228ENST00000487354 GPR26Q8NDV2 337 aa15.08■□□□□ 0
MCF2L-228ENST00000487354 TEKT4Q8WW24 435 aa15.08■□□□□ 0
MCF2L-228ENST00000487354 THAP4Q8WY91 577 aa15.08■□□□□ 0
MCF2L-228ENST00000487354 ZNF653Q96CK0 615 aa15.08■□□□□ 0
MCF2L-228ENST00000487354 TMPRSS11EQ9UL52 423 aa15.08■□□□□ 0
MCF2L-228ENST00000487354 WDR37Q9Y2I8 494 aa15.08■□□□□ 0
MCF2L-228ENST00000487354 RGSL1A5PLK6 1076 aa15.07■□□□□ 0
MCF2L-228ENST00000487354 MATN3O15232 486 aa15.07■□□□□ 0
MCF2L-228ENST00000487354 TPM2P07951 284 aa15.07■□□□□ 0
MCF2L-228ENST00000487354 EBLN1P0CF75 366 aa15.07■□□□□ 0
MCF2L-228ENST00000487354 GZMAP12544 262 aa15.07■□□□□ 0
MCF2L-228ENST00000487354 ZNF7P17097 686 aaPredicted RBP15.07■□□□□ 0
MCF2L-228ENST00000487354 RPL10P27635 214 aaKnown RBP15.07■□□□□ 0
MCF2L-228ENST00000487354 TUBB3Q13509 450 aa15.07■□□□□ 0
MCF2L-228ENST00000487354 TDRD12Q587J7 1177 aaKnown RBP15.07■□□□□ 0
MCF2L-228ENST00000487354 FAM182AQ5T1J6 154 aa15.07■□□□□ 0
MCF2L-228ENST00000487354 AGAP9Q5VTM2 703 aa15.07■□□□□ 0
MCF2L-228ENST00000487354 IRGCQ6NXR0 463 aa15.07■□□□□ 0
MCF2L-228ENST00000487354 SYVN1Q86TM6 617 aa15.07■□□□□ 0
MCF2L-228ENST00000487354 RBMXL3Q8N7X1 1067 aaKnown RBP15.07■□□□□ 0
MCF2L-228ENST00000487354 SLC38A9Q8NBW4 561 aa15.07■□□□□ 0
MCF2L-228ENST00000487354 GPR150Q8NGU9 434 aa15.07■□□□□ 0
MCF2L-228ENST00000487354 FATE1Q969F0 183 aa15.07■□□□□ 0
MCF2L-228ENST00000487354 TIMM29Q9BSF4 260 aa15.07■□□□□ 0
MCF2L-228ENST00000487354 GPR87Q9BY21 358 aa15.07■□□□□ 0
MCF2L-228ENST00000487354 ING2Q9H160 280 aa15.07■□□□□ 0
MCF2L-228ENST00000487354 HAUS4Q9H6D7 363 aa15.07■□□□□ 0
MCF2L-228ENST00000487354 TRIM39Q9HCM9 518 aa15.07■□□□□ 0
MCF2L-228ENST00000487354 RBM22Q9NW64 420 aaKnown RBP eCLIP15.07■□□□□ 0
MCF2L-228ENST00000487354 PKD2L2Q9NZM6 624 aa15.07■□□□□ 0
MCF2L-228ENST00000487354 NFKBIL1Q9UBC1 381 aaPredicted RBP15.07■□□□□ 0
MCF2L-228ENST00000487354 DNAJC16Q9Y2G8 782 aa15.07■□□□□ 0
MCF2L-228ENST00000487354 CCDC88CQ9P219 2028 aa15.07■□□□□ 0
MCF2L-228ENST00000487354 PIKFYVEQ9Y2I7 2098 aa15.07■□□□□ 0
MCF2L-228ENST00000487354 FBN2P35556 2912 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 LRRC53A6NM62 1247 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 ANKRD66B4E2M5 251 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 GPR89AB7ZAQ6 455 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 MTX2O75431 263 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 MTA2O94776 668 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 GPR89BP0CG08 455 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 CCL11P51671 97 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 DRG2P55039 364 aaKnown RBP15.06■□□□□ 0
MCF2L-228ENST00000487354 DCDC1P59894 354 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 GPS2Q13227 327 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 PAFAH1B3Q15102 231 aaKnown RBP15.06■□□□□ 0
MCF2L-228ENST00000487354 INSCQ1MX18 579 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 ANKRD20A8PQ5CZ79 823 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 ZNF569Q5MCW4 686 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 FAM69BQ5VUD6 431 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 ALS2CLQ60I27 953 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 SLC6A19Q695T7 634 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 LCN10Q6JVE6 187 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 WASH2PQ6VEQ5 465 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 LRRC49Q8IUZ0 686 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 TRIM48Q8IWZ4 208 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 GLYATL1Q969I3 302 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 BTBD6Q96KE9 485 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 FCRL4Q96PJ5 515 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 TSGA13Q96PP4 275 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 TRIB3Q96RU7 358 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 NUP85Q9BW27 656 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 NUDT9Q9BW91 350 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 WASH6PQ9NQA3 447 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 AMACRQ9UHK6 382 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms