RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 ZFP28Q8NHY6 868 aa25.86■■□□□ 1.73
HLA-C-208ENST00000487245 LRRC58Q96CX6 371 aa25.86■■□□□ 1.73
HLA-C-208ENST00000487245 KCNA7Q96RP8 456 aa25.86■■□□□ 1.73
HLA-C-208ENST00000487245 HERC2P3Q9BVR0 1158 aa25.86■■□□□ 1.73
HLA-C-208ENST00000487245 AIG1Q9NVV5 245 aa25.86■■□□□ 1.73
HLA-C-208ENST00000487245 DUS2Q9NX74 493 aaKnown RBP25.86■■□□□ 1.73
HLA-C-208ENST00000487245 IKZF3Q9UKT9 509 aa25.86■■□□□ 1.73
HLA-C-208ENST00000487245 PCDHA9Q9Y5H5 950 aa25.86■■□□□ 1.73
HLA-C-208ENST00000487245 GOLGA8CPA6NN73 597 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 H3BNH8 94 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 TIPRLO75663 272 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 ATP6V1B1P15313 513 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 ZNF23P17027 643 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 RAB33AQ14088 237 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 TSNQ15631 228 aaKnown RBP25.85■■□□□ 1.73
HLA-C-208ENST00000487245 ZRANB3Q5FWF4 1079 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 XKR7Q5GH72 579 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.85■■□□□ 1.731e-31■■■■□ 24.7
HLA-C-208ENST00000487245 CARNMT1Q8N4J0 409 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 TSPAN14Q8NG11 270 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 HM13Q8TCT9 377 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 KCNJ9Q92806 393 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 WBP2Q969T9 261 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 FUBP1Q96AE4 644 aaKnown RBP25.85■■□□□ 1.73
HLA-C-208ENST00000487245 LRCH3Q96II8 777 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 CIB1Q99828 191 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 GIMAP2Q9UG22 337 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 A0A1W2PP18 115 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 DHRS12A0PJE2 317 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 ANKRD33BA6NCL7 494 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 SNAP91O60641 907 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 MLYCDO95822 493 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 ESR1P03372 595 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 LINC00032P0C843 101 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 ALDH3B2P48448 385 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 EPHB3P54753 998 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 IL2P60568 153 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 TUBA4AP68366 448 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 SMAD3P84022 425 aaKnown RBP25.85■■□□□ 1.73
HLA-C-208ENST00000487245 RPS6KA2Q15349 733 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 PITRM1Q5JRX3 1037 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 PSAPL1Q6NUJ1 521 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 EP400NLQ6ZTU2 488 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 DNAJB7Q7Z6W7 309 aaPredicted RBP25.85■■□□□ 1.73
HLA-C-208ENST00000487245 DEFB128Q7Z7B8 93 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 PIANPQ8IYJ0 282 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 CCT7Q99832 543 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 TMEM79Q9BSE2 394 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 ZBED2Q9BTP6 218 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 GMPR2Q9P2T1 348 aaKnown RBP25.85■■□□□ 1.73
HLA-C-208ENST00000487245 MAFFQ9ULX9 164 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 PKP3Q9Y446 797 aa25.85■■□□□ 1.73
HLA-C-208ENST00000487245 BPTFQ12830 3046 aa25.84■■□□□ 1.73
HLA-C-208ENST00000487245 CRCPO75575 148 aa25.84■■□□□ 1.73
HLA-C-208ENST00000487245 UROSP10746 265 aa25.84■■□□□ 1.73
HLA-C-208ENST00000487245 IL10P22301 178 aa25.84■■□□□ 1.73
HLA-C-208ENST00000487245 RHOAP61586 193 aa25.84■■□□□ 1.73
HLA-C-208ENST00000487245 SPOUT1Q5T280 376 aaKnown RBP25.84■■□□□ 1.73
HLA-C-208ENST00000487245 PPWD1Q96BP3 646 aaKnown RBP25.84■■□□□ 1.73
HLA-C-208ENST00000487245 MPP4Q96JB8 637 aa25.84■■□□□ 1.73
HLA-C-208ENST00000487245 ZNF558Q96NG5 402 aa25.84■■□□□ 1.73
HLA-C-208ENST00000487245 FEM1AQ9BSK4 669 aa25.84■■□□□ 1.73
HLA-C-208ENST00000487245 BRINP2Q9C0B6 783 aa25.84■■□□□ 1.73
HLA-C-208ENST00000487245 MAGEE1Q9HCI5 957 aa25.84■■□□□ 1.73
HLA-C-208ENST00000487245 AGPAT4Q9NRZ5 378 aa25.84■■□□□ 1.73
HLA-C-208ENST00000487245 MYRFQ9Y2G1 1151 aa25.84■■□□□ 1.73
HLA-C-208ENST00000487245 MICAL3Q7RTP6 2002 aa25.83■■□□□ 1.73
HLA-C-208ENST00000487245 DYTNA2CJ06 578 aa25.83■■□□□ 1.73
HLA-C-208ENST00000487245 CDC7O00311 574 aa25.83■■□□□ 1.73
HLA-C-208ENST00000487245 BTN3A1O00481 513 aa25.83■■□□□ 1.73
HLA-C-208ENST00000487245 PRRG1O14668 218 aa25.83■■□□□ 1.73
HLA-C-208ENST00000487245 FZD6O60353 706 aa25.83■■□□□ 1.73
HLA-C-208ENST00000487245 ESRRBO95718 433 aa25.83■■□□□ 1.73
HLA-C-208ENST00000487245 GPIP06744 558 aa25.83■■□□□ 1.73
HLA-C-208ENST00000487245 C7P10643 843 aa25.83■■□□□ 1.73
HLA-C-208ENST00000487245 CDKN1CP49918 316 aaPredicted RBP25.83■■□□□ 1.73
HLA-C-208ENST00000487245 AP1S1P61966 158 aa25.83■■□□□ 1.73
HLA-C-208ENST00000487245 CACNG1Q06432 222 aa25.83■■□□□ 1.73
HLA-C-208ENST00000487245 RCAN2Q14206 197 aa25.83■■□□□ 1.73
HLA-C-208ENST00000487245 TMEM259Q4ZIN3 620 aa25.83■■□□□ 1.73
HLA-C-208ENST00000487245 TBCELQ5QJ74 424 aa25.83■■□□□ 1.73
HLA-C-208ENST00000487245 LINGO4Q6UY18 593 aa25.83■■□□□ 1.73
HLA-C-208ENST00000487245 ANKRD33Q7Z3H0 272 aa25.83■■□□□ 1.73
HLA-C-208ENST00000487245 PTRH1Q86Y79 214 aaKnown RBP25.83■■□□□ 1.73
HLA-C-208ENST00000487245 TFAP2CQ92754 450 aa25.83■■□□□ 1.73
HLA-C-208ENST00000487245 TMEM125Q96AQ2 219 aa25.83■■□□□ 1.73
HLA-C-208ENST00000487245 TMEM169Q96HH4 297 aa25.83■■□□□ 1.73
HLA-C-208ENST00000487245 OLAHQ9NV23 265 aa25.83■■□□□ 1.73
HLA-C-208ENST00000487245 PCTPQ9UKL6 214 aa25.83■■□□□ 1.73
HLA-C-208ENST00000487245 BTRCQ9Y297 605 aa25.83■■□□□ 1.73
HLA-C-208ENST00000487245 OR51B4Q9Y5P0 310 aa25.83■■□□□ 1.73
HLA-C-208ENST00000487245 AK5Q9Y6K8 562 aa25.83■■□□□ 1.73
HLA-C-208ENST00000487245 MYOCOSA0A1B0GUC4 107 aa25.83■■□□□ 1.72
HLA-C-208ENST00000487245 AKAP10O43572 662 aa25.83■■□□□ 1.72
HLA-C-208ENST00000487245 EEDO75530 441 aaKnown RBP25.83■■□□□ 1.72
HLA-C-208ENST00000487245 CYBBP04839 570 aa25.83■■□□□ 1.72
HLA-C-208ENST00000487245 MZF1P28698 734 aaPredicted RBP25.83■■□□□ 1.72
HLA-C-208ENST00000487245 NME5P56597 212 aa25.83■■□□□ 1.72
HLA-C-208ENST00000487245 TWF1Q12792 350 aa25.83■■□□□ 1.72
HLA-C-208ENST00000487245 PDCD4Q53EL6 469 aaKnown RBP25.83■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms