RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 PRPF4BQ13523 1007 aaKnown RBP3.49□□□□□ -1.85
SNRNP27-204ENST00000487029 GRAPQ13588 217 aa3.49□□□□□ -1.85
SNRNP27-204ENST00000487029 DHX34Q14147 1143 aaKnown RBP3.49□□□□□ -1.85
SNRNP27-204ENST00000487029 PLCB4Q15147 1175 aa3.49□□□□□ -1.85
SNRNP27-204ENST00000487029 RASA2Q15283 850 aa3.49□□□□□ -1.85
SNRNP27-204ENST00000487029 OASLQ15646 514 aaKnown RBP3.49□□□□□ -1.85
SNRNP27-204ENST00000487029 DLG2Q15700 870 aa3.49□□□□□ -1.85
SNRNP27-204ENST00000487029 KCNT1Q5JUK3 1230 aa3.49□□□□□ -1.85
SNRNP27-204ENST00000487029 LCN10Q6JVE6 187 aa3.49□□□□□ -1.85
SNRNP27-204ENST00000487029 PAPD4Q6PIY7 484 aaKnown RBP3.49□□□□□ -1.85
SNRNP27-204ENST00000487029 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.49□□□□□ -1.85
SNRNP27-204ENST00000487029 NRROSQ86YC3 692 aa3.49□□□□□ -1.85
SNRNP27-204ENST00000487029 POMGNT2Q8NAT1 580 aa3.49□□□□□ -1.85
SNRNP27-204ENST00000487029 KCTD6Q8NC69 237 aa3.49□□□□□ -1.85
SNRNP27-204ENST00000487029 CCDC191Q8NCU4 936 aa3.49□□□□□ -1.85
SNRNP27-204ENST00000487029 MCUQ8NE86 351 aa3.49□□□□□ -1.85
SNRNP27-204ENST00000487029 OR2AK2Q8NG84 335 aa3.49□□□□□ -1.85
SNRNP27-204ENST00000487029 ZNF622Q969S3 477 aaKnown RBP eCLIP3.49□□□□□ -1.85
SNRNP27-204ENST00000487029 RHBDF1Q96CC6 855 aa3.49□□□□□ -1.85
SNRNP27-204ENST00000487029 DACH2Q96NX9 599 aa3.49□□□□□ -1.85
SNRNP27-204ENST00000487029 KLHL4Q9C0H6 718 aa3.49□□□□□ -1.85
SNRNP27-204ENST00000487029 DNAJC18Q9H819 358 aa3.49□□□□□ -1.85
SNRNP27-204ENST00000487029 PCDH9Q9HC56 1237 aa3.49□□□□□ -1.85
SNRNP27-204ENST00000487029 TAB2Q9NYJ8 693 aa3.49□□□□□ -1.85
SNRNP27-204ENST00000487029 DBNLQ9UJU6 430 aaKnown RBP3.49□□□□□ -1.85
SNRNP27-204ENST00000487029 PPIEQ9UNP9 301 aaKnown RBP3.49□□□□□ -1.85
SNRNP27-204ENST00000487029 LOXL2Q9Y4K0 774 aa3.49□□□□□ -1.85
SNRNP27-204ENST00000487029 SNX9Q9Y5X1 595 aa3.49□□□□□ -1.85
SNRNP27-204ENST00000487029 LOC102723996A0A087X1L8 192 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 IGLV5-52A0A0A0MRZ9 124 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 hCG_1809904A0A1W2PP81 198 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 A0A1W2PPE2 198 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 A0A1W2PR64 198 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 A6NL46 340 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 KCNN4O15554 427 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 DKC1O60832 514 aaKnown RBP eCLIP3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 RFPL2O75678 378 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 RSL1D1O76021 490 aaKnown RBP3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 PRSS2P07478 247 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 ACAA1P09110 424 aaPredicted RBP3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 UGT1A1P22309 533 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 ARSEP51690 589 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 TMF1P82094 1093 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 BNC1Q01954 994 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 DDR1Q08345 913 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 TRAF3Q13114 568 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 MVPQ14764 893 aaKnown RBP3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 HLFQ16534 295 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 MYLK3Q32MK0 819 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 IGSF11Q5DX21 431 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 XKR9Q5GH70 373 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 RGMBQ6NW40 437 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 RPUSD3Q6P087 351 aaKnown RBP3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 FAM122CQ6P4D5 195 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 BRAT1Q6PJG6 821 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 TPRG1Q6ZUI0 275 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 CLIP4Q8N3C7 705 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 RASGEF1CQ8N431 466 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 GUF1Q8N442 669 aaKnown RBP3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 POGLUT1Q8NBL1 392 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 GSDMBQ8TAX9 411 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 PTPMT1Q8WUK0 201 aaPredicted RBP3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 DNAAF4Q8WXU2 420 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 TMCO6Q96DC7 493 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 MTBPQ96DY7 904 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 OR1F2PQ96R84 312 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 CMKLR1Q99788 373 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 RTN4RQ9BZR6 473 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 CD93Q9NPY3 652 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 TRMT1Q9NXH9 659 aaKnown RBP3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 MCM9Q9NXL9 1143 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 C1RLQ9NZP8 487 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 CFDP1Q9UEE9 299 aaPredicted RBP3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 FBXL2Q9UKC9 423 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 ZNF148Q9UQR1 794 aa3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 TMEM184BQ9Y519 407 aaPredicted RBP3.48□□□□□ -1.85
SNRNP27-204ENST00000487029 GPR75-ASB3A0A0A6YYF3 556 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 CLEC18AA5D8T8 446 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 FAM90A26D6RGX4 464 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 UBE2CO00762 179 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 ANKRD28O15084 1053 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 PLPP2O43688 288 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 ZNF500O60304 480 aaPredicted RBP3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 CGAP01215 116 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 ABCB1P08183 1280 aaPredicted RBP3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 ITGB8P26012 769 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 PEX5P50542 639 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 GAS1P54826 345 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 CLDN20P56880 219 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 EGR4Q05215 589 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 AIMP1Q12904 312 aaKnown RBP3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 CALCRLQ16602 461 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 SYT16Q17RD7 645 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 C18orf63Q68DL7 685 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 ADALQ6DHV7 355 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 NADSYN1Q6IA69 706 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 PDXDC1Q6P996 788 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 CCNI2Q6ZMN8 369 aaPredicted RBP3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 GPR180Q86V85 440 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 PGBD5Q8N414 524 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms