RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 ROPN1Q9HAT0 212 aaPredicted RBP9.46□□□□□ -0.9
MCF2L-227ENST00000486806 TRIM39Q9HCM9 518 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 FGF22Q9HCT0 170 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 TXNDC16Q9P2K2 825 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 PSMC3IPQ9P2W1 217 aaPredicted RBP9.46□□□□□ -0.9
MCF2L-227ENST00000486806 ATXN10Q9UBB4 475 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 CTNNAL1Q9UBT7 734 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 PILRBQ9UKJ0 227 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 CRYL1Q9Y2S2 319 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 PCDHB1Q9Y5F3 818 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 PCYT1BQ9Y5K3 369 aaPredicted RBP9.46□□□□□ -0.9
MCF2L-227ENST00000486806 PLXNB3Q9ULL4 1909 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 SPTY2D1-AS1A0A0U1RR47 76 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 UBA6A0AVT1 1052 aaPredicted RBP9.45□□□□□ -0.9
MCF2L-227ENST00000486806 POC1B-GALNT4F8VUJ3 575 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 AGPSO00116 658 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 NUAK1O60285 661 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 DNAJC6O75061 913 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 CDH16O75309 829 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 RHOBTB1O94844 696 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 CDK14O94921 469 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 FUCA1P04066 466 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 CEACAM5P06731 702 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 THEGLP0DJG4 465 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 RALBP11234 206 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 ZNF8P17098 575 aaPredicted RBP9.45□□□□□ -0.9
MCF2L-227ENST00000486806 MSH3P20585 1137 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 KELP23276 732 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 CNTFP26441 200 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 CD38P28907 300 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 SPRP35270 261 aaPredicted RBP9.45□□□□□ -0.9
MCF2L-227ENST00000486806 HOXD12P35452 270 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 MSH2P43246 934 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 MAGEA12P43365 314 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 SLCO1A2P46721 670 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 DHPSP49366 369 aaPredicted RBP9.45□□□□□ -0.9
MCF2L-227ENST00000486806 SERPINB9P50453 376 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 CSRP3P50461 194 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 TIAL1Q01085 375 aaKnown RBP eCLIP9.45□□□□□ -0.9
MCF2L-227ENST00000486806 IFFO1Q0D2I5 559 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 SIM2Q14190 667 aaPredicted RBP9.45□□□□□ -0.9
MCF2L-227ENST00000486806 ZNF658BQ4V348 819 aaPredicted RBP9.45□□□□□ -0.9
MCF2L-227ENST00000486806 RBM20Q5T481 1227 aaKnown RBP9.45□□□□□ -0.9
MCF2L-227ENST00000486806 ZC3H14Q6PJT7 736 aaKnown RBP9.45□□□□□ -0.9
MCF2L-227ENST00000486806 LAYNQ6UX15 382 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 CEP68Q76N32 757 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 ZNF547Q8IVP9 402 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 CNPY4Q8N129 248 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 RIBC1Q8N443 379 aaPredicted RBP9.45□□□□□ -0.9
MCF2L-227ENST00000486806 CLDN19Q8N6F1 224 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 ACVR1CQ8NER5 493 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 OR56A4Q8NGH8 313 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 LKAAEAR1Q8TD35 194 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 NAT14Q8WUY8 206 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 MRRFQ96E11 262 aaKnown RBP9.45□□□□□ -0.9
MCF2L-227ENST00000486806 PDXPQ96GD0 296 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 DCUN1D1Q96GG9 259 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 ATXN7L3BQ96GX2 97 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 LINC00615Q96LM1 132 aaPredicted RBP9.45□□□□□ -0.9
MCF2L-227ENST00000486806 WDR92Q96MX6 357 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 NDNQ99608 321 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 PRRX2Q99811 253 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 CLPBQ9H078 707 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 MIR1-1HGQ9H1L0 117 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 OR2AG1Q9H205 316 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 AASDHPPTQ9NRN7 309 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 TMEM74BQ9NUR3 256 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 LGALS13Q9UHV8 139 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 GNPTGQ9UJJ9 305 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 PNMA8BQ9ULN7 279 aaPredicted RBP9.45□□□□□ -0.9
MCF2L-227ENST00000486806 COMMD10Q9Y6G5 202 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 ATXN2Q99700 1313 aaKnown RBP9.45□□□□□ -0.9
MCF2L-227ENST00000486806 WDFY4Q6ZS81 3184 aa9.45□□□□□ -0.9
MCF2L-227ENST00000486806 TRPM6Q9BX84 2022 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 FAM95CA0A1B0GW59 222 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 PRSS38A1L453 326 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 H3BMM5 538 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 QSOX1O00391 747 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 TNFRSF10CO14798 259 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 RASGRF2O14827 1237 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 VILLO15195 856 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 BCAT2O15382 392 aaPredicted RBP9.44□□□□□ -0.9
MCF2L-227ENST00000486806 WISP3O95389 354 aaPredicted RBP9.44□□□□□ -0.9
MCF2L-227ENST00000486806 ALDOAP04075 364 aaKnown RBP9.44□□□□□ -0.9
MCF2L-227ENST00000486806 PKMP14618 531 aaKnown RBP9.44□□□□□ -0.9
MCF2L-227ENST00000486806 CD9P21926 228 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 FDXRP22570 491 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 HTR1BP28222 390 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 FMO4P31512 558 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 POLD2P49005 469 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 AFF3P51826 1226 aaKnown RBP9.44□□□□□ -0.9
MCF2L-227ENST00000486806 CDKN2DP55273 166 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 NXPH1P58417 271 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 BMPR2Q13873 1038 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 FZD2Q14332 565 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 ZKSCAN8Q15776 578 aaPredicted RBP9.44□□□□□ -0.9
MCF2L-227ENST00000486806 ALG11Q2TAA5 492 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 HECTD2Q5U5R9 776 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 FAM45BPQ6NSW5 357 aa9.44□□□□□ -0.9
MCF2L-227ENST00000486806 DOK6Q6PKX4 331 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms