RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 CD274Q9NZQ7 290 aa20.14■□□□□ 0.81
HPS3-206ENST00000486530 PCTPQ9UKL6 214 aa20.14■□□□□ 0.81
HPS3-206ENST00000486530 NUP210Q8TEM1 1887 aaPredicted RBP20.14■□□□□ 0.81
HPS3-206ENST00000486530 NCF1BA6NI72 391 aaPredicted RBP20.13■□□□□ 0.81
HPS3-206ENST00000486530 NCF1CA8MVU1 366 aaPredicted RBP20.13■□□□□ 0.81
HPS3-206ENST00000486530 PSMD12O00232 456 aaPredicted RBP20.13■□□□□ 0.81
HPS3-206ENST00000486530 NCF1P14598 390 aaPredicted RBP20.13■□□□□ 0.81
HPS3-206ENST00000486530 HK3P52790 923 aa20.13■□□□□ 0.81
HPS3-206ENST00000486530 CDC16Q13042 620 aa20.13■□□□□ 0.81
HPS3-206ENST00000486530 ART3Q13508 389 aa20.13■□□□□ 0.81
HPS3-206ENST00000486530 FASTKQ14296 549 aaKnown RBP20.13■□□□□ 0.81
HPS3-206ENST00000486530 PDE12Q6L8Q7 609 aaKnown RBP20.13■□□□□ 0.81
HPS3-206ENST00000486530 BNC2Q6ZN30 1099 aaPredicted RBP20.13■□□□□ 0.81
HPS3-206ENST00000486530 DPY19L3Q6ZPD9 716 aa20.13■□□□□ 0.81
HPS3-206ENST00000486530 HPS6Q86YV9 775 aa20.13■□□□□ 0.81
HPS3-206ENST00000486530 CCDC124Q96CT7 223 aaKnown RBP20.13■□□□□ 0.81
HPS3-206ENST00000486530 ASIC4Q96FT7 647 aa20.13■□□□□ 0.81
HPS3-206ENST00000486530 BOCQ9BWV1 1114 aa20.13■□□□□ 0.81
HPS3-206ENST00000486530 SEMA4BQ9NPR2 832 aaPredicted RBP20.13■□□□□ 0.81
HPS3-206ENST00000486530 MARK1Q9P0L2 795 aa20.13■□□□□ 0.81
HPS3-206ENST00000486530 MCM8Q9UJA3 840 aa20.13■□□□□ 0.81
HPS3-206ENST00000486530 POMPQ9Y244 141 aa20.13■□□□□ 0.81
HPS3-206ENST00000486530 PIKFYVEQ9Y2I7 2098 aa20.13■□□□□ 0.81
HPS3-206ENST00000486530 MYO7AQ13402 2215 aa20.13■□□□□ 0.81
HPS3-206ENST00000486530 RGS4P49798 205 aa20.13■□□□□ 0.81
HPS3-206ENST00000486530 GTF2A1P52655 376 aaPredicted RBP20.13■□□□□ 0.81
HPS3-206ENST00000486530 STX5Q13190 355 aa20.13■□□□□ 0.81
HPS3-206ENST00000486530 GPM6BQ13491 265 aa20.13■□□□□ 0.81
HPS3-206ENST00000486530 TGFBIQ15582 683 aa20.13■□□□□ 0.81
HPS3-206ENST00000486530 LY6G5CQ5SRR4 150 aa20.13■□□□□ 0.81
HPS3-206ENST00000486530 LRRC66Q68CR7 880 aa20.13■□□□□ 0.81
HPS3-206ENST00000486530 MACC1Q6ZN28 852 aa20.13■□□□□ 0.81
HPS3-206ENST00000486530 LRRC74BQ6ZQY2 392 aa20.13■□□□□ 0.81
HPS3-206ENST00000486530 GK5Q6ZS86 529 aa20.13■□□□□ 0.81
HPS3-206ENST00000486530 FRA10AC1Q70Z53 315 aa20.13■□□□□ 0.81
HPS3-206ENST00000486530 EFL1Q7Z2Z2 1120 aaKnown RBP20.13■□□□□ 0.81
HPS3-206ENST00000486530 NXPE1Q8N323 547 aa20.13■□□□□ 0.81
HPS3-206ENST00000486530 RSRC1Q96IZ7 334 aaKnown RBP20.13■□□□□ 0.81
HPS3-206ENST00000486530 C3orf30Q96M34 536 aa20.13■□□□□ 0.81
HPS3-206ENST00000486530 SAMD11Q96NU1 681 aa20.13■□□□□ 0.81
HPS3-206ENST00000486530 NUSAP1Q9BXS6 441 aaKnown RBP20.13■□□□□ 0.81
HPS3-206ENST00000486530 ZDHHC7Q9NXF8 308 aa20.13■□□□□ 0.81
HPS3-206ENST00000486530 UTP6Q9NYH9 597 aaKnown RBP20.13■□□□□ 0.81
HPS3-206ENST00000486530 YBX2Q9Y2T7 364 aaKnown RBP20.13■□□□□ 0.81
HPS3-206ENST00000486530 LRRC42Q9Y546 428 aa20.13■□□□□ 0.81
HPS3-206ENST00000486530 CHD7Q9P2D1 2997 aa20.12■□□□□ 0.81
HPS3-206ENST00000486530 AGAP14A8MT82 685 aa20.12■□□□□ 0.81
HPS3-206ENST00000486530 PIP5K1BO14986 540 aa20.12■□□□□ 0.81
HPS3-206ENST00000486530 CRCPO75575 148 aa20.12■□□□□ 0.81
HPS3-206ENST00000486530 ARSAP15289 507 aa20.12■□□□□ 0.81
HPS3-206ENST00000486530 CA5AP35218 305 aa20.12■□□□□ 0.81
HPS3-206ENST00000486530 AGTR2P50052 363 aa20.12■□□□□ 0.81
HPS3-206ENST00000486530 FOXA1P55317 472 aa20.12■□□□□ 0.81
HPS3-206ENST00000486530 STX1BP61266 288 aa20.12■□□□□ 0.81
HPS3-206ENST00000486530 ZDHHC20Q5W0Z9 365 aa20.12■□□□□ 0.81
HPS3-206ENST00000486530 ADIPOR2Q86V24 386 aa20.12■□□□□ 0.81
HPS3-206ENST00000486530 PLPP6Q8IY26 295 aa20.12■□□□□ 0.81
HPS3-206ENST00000486530 AHI1Q8N157 1196 aa20.12■□□□□ 0.81
HPS3-206ENST00000486530 OR56A4Q8NGH8 313 aa20.12■□□□□ 0.81
HPS3-206ENST00000486530 HMGCLL1Q8TB92 370 aa20.12■□□□□ 0.81
HPS3-206ENST00000486530 CCDC97Q96F63 343 aaPredicted RBP20.12■□□□□ 0.81
HPS3-206ENST00000486530 MRPL1Q9BYD6 325 aaKnown RBP20.12■□□□□ 0.81
HPS3-206ENST00000486530 SLC2A11Q9BYW1 496 aa20.12■□□□□ 0.81
HPS3-206ENST00000486530 LINC00597Q9H2U6 94 aa20.12■□□□□ 0.81
HPS3-206ENST00000486530 AKTIPQ9H8T0 292 aa20.12■□□□□ 0.81
HPS3-206ENST00000486530 WDR41Q9HAD4 459 aa20.12■□□□□ 0.81
HPS3-206ENST00000486530 SLCO3A1Q9UIG8 710 aa20.12■□□□□ 0.81
HPS3-206ENST00000486530 ATP6AP2A0A1C7CYW4 349 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 A8MX80 341 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 WASH3PC4AMC7 463 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 ZNF197O14709 1029 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 VPS4BO75351 444 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 ATP6AP2O75787 350 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 ESRRBO95718 433 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 UGT2B4P06133 528 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 POU2F2P09086 479 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 CHRM1P11229 460 aaPredicted RBP20.11■□□□□ 0.81
HPS3-206ENST00000486530 ANPEPP15144 967 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 UGT1A6P19224 532 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 UGT1A1P22309 533 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 UGT1A4P22310 534 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 UGT1A3P35503 534 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 UGT1A5P35504 534 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 MAGEA10P43363 369 aaPredicted RBP20.11■□□□□ 0.81
HPS3-206ENST00000486530 NTHL1P78549 312 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 ZNF697Q5TEC3 545 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 TLDC1Q6P9B6 456 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 Q6ZVU0 165 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 KIAA0907Q7Z7F0 614 aaPredicted RBP20.11■□□□□ 0.81
HPS3-206ENST00000486530 MYO1HQ8N1T3 1032 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 GPR26Q8NDV2 337 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 DPP7Q9UHL4 492 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 PRSS21Q9Y6M0 314 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 WASF2Q9Y6W5 498 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 SLC9A3R1O14745 358 aaPredicted RBP20.11■□□□□ 0.81
HPS3-206ENST00000486530 GIPC1O14908 333 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 SORBS2O94875 1100 aaKnown RBP20.11■□□□□ 0.81
HPS3-206ENST00000486530 ENO3P13929 434 aaPredicted RBP20.11■□□□□ 0.81
HPS3-206ENST00000486530 DGKAP23743 735 aa20.11■□□□□ 0.81
HPS3-206ENST00000486530 RECQLP46063 649 aaPredicted RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms