RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 IL7RP16871 459 aa3.49□□□□□ -1.85
GCFC2-209ENST00000486016 NSUN5P2Q63ZY6 315 aa3.49□□□□□ -1.85
GCFC2-209ENST00000486016 LONP2Q86WA8 852 aa3.49□□□□□ -1.85
GCFC2-209ENST00000486016 RDM1Q8NG50 284 aa3.49□□□□□ -1.85
GCFC2-209ENST00000486016 UTP15Q8TED0 518 aaKnown RBP3.49□□□□□ -1.85
GCFC2-209ENST00000486016 FAM222BQ8WU58 562 aa3.49□□□□□ -1.85
GCFC2-209ENST00000486016 VGLL1Q99990 258 aa3.49□□□□□ -1.85
GCFC2-209ENST00000486016 RBM4BQ9BQ04 359 aaKnown RBP3.49□□□□□ -1.85
GCFC2-209ENST00000486016 RAD21L1Q9H4I0 556 aa3.49□□□□□ -1.85
GCFC2-209ENST00000486016 APOBEC3GQ9HC16 384 aaKnown RBP3.49□□□□□ -1.85
GCFC2-209ENST00000486016 RPS10P5Q9NQ39 176 aa3.49□□□□□ -1.85
GCFC2-209ENST00000486016 ZNF71Q9NQZ8 489 aaPredicted RBP3.49□□□□□ -1.85
GCFC2-209ENST00000486016 KCNJ14Q9UNX9 436 aa3.49□□□□□ -1.85
GCFC2-209ENST00000486016 TEX13DA0A0J9YY54 714 aaPredicted RBP3.48□□□□□ -1.85
GCFC2-209ENST00000486016 C1orf226A1L170 272 aa3.48□□□□□ -1.85
GCFC2-209ENST00000486016 MAGEB17A8MXT2 336 aa3.48□□□□□ -1.85
GCFC2-209ENST00000486016 DCXO43602 365 aa3.48□□□□□ -1.85
GCFC2-209ENST00000486016 BUD23O43709 281 aaKnown RBP3.48□□□□□ -1.85
GCFC2-209ENST00000486016 KCNK5O95279 499 aa3.48□□□□□ -1.85
GCFC2-209ENST00000486016 POLBP06746 335 aa3.48□□□□□ -1.85
GCFC2-209ENST00000486016 FAM157CP0CG43 387 aa3.48□□□□□ -1.85
GCFC2-209ENST00000486016 LIFP15018 202 aa3.48□□□□□ -1.85
GCFC2-209ENST00000486016 CNTFP26441 200 aa3.48□□□□□ -1.85
GCFC2-209ENST00000486016 ARL1P40616 181 aaPredicted RBP3.48□□□□□ -1.85
GCFC2-209ENST00000486016 CSRP3P50461 194 aa3.48□□□□□ -1.85
GCFC2-209ENST00000486016 OS9Q13438 667 aaPredicted RBP3.48□□□□□ -1.85
GCFC2-209ENST00000486016 DUOXA1Q1HG43 343 aa3.48□□□□□ -1.85
GCFC2-209ENST00000486016 SLC9C2Q5TAH2 1124 aa3.48□□□□□ -1.85
GCFC2-209ENST00000486016 INO80CQ6PI98 192 aaPredicted RBP3.48□□□□□ -1.85
GCFC2-209ENST00000486016 PACS1Q6VY07 963 aa3.48□□□□□ -1.85
GCFC2-209ENST00000486016 GBGT1Q8N5D6 347 aa3.48□□□□□ -1.85
GCFC2-209ENST00000486016 BMPERQ8N8U9 685 aa3.48□□□□□ -1.85
GCFC2-209ENST00000486016 OR1J2Q8NGS2 313 aa3.48□□□□□ -1.85
GCFC2-209ENST00000486016 NFKBIDQ8NI38 313 aa3.48□□□□□ -1.85
GCFC2-209ENST00000486016 GCC1Q96CN9 775 aa3.48□□□□□ -1.85
GCFC2-209ENST00000486016 HVCN1Q96D96 273 aa3.48□□□□□ -1.85
GCFC2-209ENST00000486016 RNF125Q96EQ8 232 aa3.48□□□□□ -1.85
GCFC2-209ENST00000486016 OXNAD1Q96HP4 312 aaPredicted RBP3.48□□□□□ -1.85
GCFC2-209ENST00000486016 HARBI1Q96MB7 349 aa3.48□□□□□ -1.85
GCFC2-209ENST00000486016 TMEM68Q96MH6 324 aa3.48□□□□□ -1.85
GCFC2-209ENST00000486016 CABLES2Q9BTV7 478 aa3.48□□□□□ -1.85
GCFC2-209ENST00000486016 SLC7A10Q9NS82 523 aa3.48□□□□□ -1.85
GCFC2-209ENST00000486016 COPG2Q9UBF2 871 aa3.48□□□□□ -1.85
GCFC2-209ENST00000486016 UBA2Q9UBT2 640 aaPredicted RBP3.48□□□□□ -1.85
GCFC2-209ENST00000486016 MKLN1Q9UL63 735 aa3.48□□□□□ -1.85
GCFC2-209ENST00000486016 TMEM184BQ9Y519 407 aaPredicted RBP3.48□□□□□ -1.85
GCFC2-209ENST00000486016 CLIC4Q9Y696 253 aa3.48□□□□□ -1.85
GCFC2-209ENST00000486016 CYP46A1Q9Y6A2 500 aa3.48□□□□□ -1.85
GCFC2-209ENST00000486016 AGRNO00468 2067 aa3.47□□□□□ -1.85
GCFC2-209ENST00000486016 HOXC11O43248 304 aaPredicted RBP3.47□□□□□ -1.85
GCFC2-209ENST00000486016 JRKO75564 520 aa3.47□□□□□ -1.85
GCFC2-209ENST00000486016 CLPTM1O96005 669 aa3.47□□□□□ -1.85
GCFC2-209ENST00000486016 PLA2G4BP0C869 781 aa3.47□□□□□ -1.85
GCFC2-209ENST00000486016 SELLP14151 372 aa3.47□□□□□ -1.85
GCFC2-209ENST00000486016 NEXNQ0ZGT2 675 aa3.47□□□□□ -1.85
GCFC2-209ENST00000486016 BIRC2Q13490 618 aa3.47□□□□□ -1.85
GCFC2-209ENST00000486016 ZNF239Q16600 458 aaKnown RBP3.47□□□□□ -1.85
GCFC2-209ENST00000486016 CTU2Q2VPK5 515 aaKnown RBP3.47□□□□□ -1.85
GCFC2-209ENST00000486016 SOWAHCQ53LP3 525 aaPredicted RBP3.47□□□□□ -1.85
GCFC2-209ENST00000486016 ZNF805Q5CZA5 627 aa3.47□□□□□ -1.85
GCFC2-209ENST00000486016 TCTE1Q5JU00 501 aa3.47□□□□□ -1.85
GCFC2-209ENST00000486016 FFAR4Q5NUL3 377 aa3.47□□□□□ -1.85
GCFC2-209ENST00000486016 ZNF613Q6PF04 617 aa3.47□□□□□ -1.85
GCFC2-209ENST00000486016 METTL7BQ6UX53 244 aa3.47□□□□□ -1.85
GCFC2-209ENST00000486016 PM20D2Q8IYS1 436 aa3.47□□□□□ -1.85
GCFC2-209ENST00000486016 SCML4Q8N228 414 aa3.47□□□□□ -1.85
GCFC2-209ENST00000486016 GMPPAQ96IJ6 420 aaPredicted RBP3.47□□□□□ -1.85
GCFC2-209ENST00000486016 PRMT6Q96LA8 375 aaPredicted RBP3.47□□□□□ -1.85
GCFC2-209ENST00000486016 SYT11Q9BT88 431 aa3.47□□□□□ -1.85
GCFC2-209ENST00000486016 STRA6Q9BX79 667 aa3.47□□□□□ -1.85
GCFC2-209ENST00000486016 SIL1Q9H173 461 aa3.47□□□□□ -1.85
GCFC2-209ENST00000486016 VEZTQ9HBM0 779 aa3.47□□□□□ -1.85
GCFC2-209ENST00000486016 ATAD3AQ9NVI7 634 aa3.47□□□□□ -1.85
GCFC2-209ENST00000486016 STK39Q9UEW8 545 aa3.47□□□□□ -1.85
GCFC2-209ENST00000486016 CNOT8Q9UFF9 292 aaKnown RBP3.47□□□□□ -1.85
GCFC2-209ENST00000486016 STK36Q9NRP7 1315 aa3.46□□□□□ -1.85
GCFC2-209ENST00000486016 ARHGEF40Q8TER5 1519 aa3.46□□□□□ -1.86
GCFC2-209ENST00000486016 A0A1W2PRG0 241 aa3.46□□□□□ -1.86
GCFC2-209ENST00000486016 TGFB1I1O43294 461 aa3.46□□□□□ -1.86
GCFC2-209ENST00000486016 NKX2-2O95096 273 aa3.46□□□□□ -1.86
GCFC2-209ENST00000486016 EML2O95834 649 aa3.46□□□□□ -1.86
GCFC2-209ENST00000486016 LIPFP07098 398 aa3.46□□□□□ -1.86
GCFC2-209ENST00000486016 TPOP07202 933 aa3.46□□□□□ -1.86
GCFC2-209ENST00000486016 NR2F2P24468 414 aa3.46□□□□□ -1.86
GCFC2-209ENST00000486016 ITGA3P26006 1051 aa3.46□□□□□ -1.86
GCFC2-209ENST00000486016 EPHA2P29317 976 aa3.46□□□□□ -1.86
GCFC2-209ENST00000486016 EPHA8P29322 1005 aaPredicted RBP3.46□□□□□ -1.86
GCFC2-209ENST00000486016 BMXP51813 675 aa3.46□□□□□ -1.86
GCFC2-209ENST00000486016 EIF3BP55884 814 aaKnown RBP3.46□□□□□ -1.86
GCFC2-209ENST00000486016 PPARDQ03181 441 aa3.46□□□□□ -1.86
GCFC2-209ENST00000486016 CDC16Q13042 620 aa3.46□□□□□ -1.86
GCFC2-209ENST00000486016 TRPC3Q13507 836 aa3.46□□□□□ -1.86
GCFC2-209ENST00000486016 FAM69AQ5T7M9 428 aa3.46□□□□□ -1.86
GCFC2-209ENST00000486016 BHLHB9Q6PI77 547 aa3.46□□□□□ -1.86
GCFC2-209ENST00000486016 SH2D5Q6ZV89 423 aa3.46□□□□□ -1.86
GCFC2-209ENST00000486016 RASGEF1CQ8N431 466 aa3.46□□□□□ -1.86
GCFC2-209ENST00000486016 GCSAMQ8N6F7 178 aa3.46□□□□□ -1.86
GCFC2-209ENST00000486016 PPHLN1Q8NEY8 458 aaKnown RBP3.46□□□□□ -1.86
GCFC2-209ENST00000486016 SAAL1Q96ER3 474 aa3.46□□□□□ -1.86
GCFC2-209ENST00000486016 EGLN2Q96KS0 407 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms