RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 GCLMP48507 274 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 PITX1P78337 314 aaPredicted RBP5.32□□□□□ -1.56
PTPN4-210ENST00000485247 NR1D2Q14995 579 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 SF1Q15637 639 aaKnown RBP5.32□□□□□ -1.56
PTPN4-210ENST00000485247 KNOP1Q1ED39 458 aaKnown RBP5.32□□□□□ -1.56
PTPN4-210ENST00000485247 WSCD2Q2TBF2 565 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 ZNF805Q5CZA5 627 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 CARD16Q5EG05 197 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 MIIPQ5JXC2 388 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 ANKRD40Q6AI12 368 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 PMF1Q6P1K2 205 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 ZNF517Q6ZMY9 492 aaPredicted RBP5.32□□□□□ -1.56
PTPN4-210ENST00000485247 C17orf82Q86X59 251 aaPredicted RBP5.32□□□□□ -1.56
PTPN4-210ENST00000485247 ZNF761Q86XN6 746 aaPredicted RBP5.32□□□□□ -1.56
PTPN4-210ENST00000485247 RHOT1Q8IXI2 618 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 FAM186BQ8IYM0 893 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 CCDC150Q8NCX0 1101 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 FDCSPQ8NFU4 85 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 OR56A4Q8NGH8 313 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 ATL2Q8NHH9 583 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 PATE1Q8WXA2 126 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 OR1E3Q8WZA6 343 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 STAMBPL1Q96FJ0 436 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 AHCYL2Q96HN2 611 aaKnown RBP5.32□□□□□ -1.56
PTPN4-210ENST00000485247 NUDT9Q9BW91 350 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 TRIM8Q9BZR9 551 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 TM6SF2Q9BZW4 377 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 SUDS3Q9H7L9 328 aaPredicted RBP5.32□□□□□ -1.56
PTPN4-210ENST00000485247 FGF22Q9HCT0 170 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 SLC39A2Q9NP94 309 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 LUC7LQ9NQ29 371 aaKnown RBP5.32□□□□□ -1.56
PTPN4-210ENST00000485247 COX16Q9P0S2 106 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 CGNQ9P2M7 1197 aaKnown RBP5.32□□□□□ -1.56
PTPN4-210ENST00000485247 HECAQ9UBI9 543 aaPredicted RBP5.32□□□□□ -1.56
PTPN4-210ENST00000485247 SLC12A6Q9UHW9 1150 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 MOSPD1Q9UJG1 213 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 TBC1D30Q9Y2I9 924 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 ACTL7AQ9Y615 435 aa5.32□□□□□ -1.56
PTPN4-210ENST00000485247 PRRC2CQ9Y520 2896 aaKnown RBP5.32□□□□□ -1.56
PTPN4-210ENST00000485247 LRP4O75096 1905 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 O00370 1275 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 PRRG2O14669 202 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 ZNF185O15231 689 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 CLDN11O75508 207 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 KIAA0754O94854 1291 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 ADCY5O95622 1261 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 TRUB2O95900 331 aaKnown RBP5.31□□□□□ -1.56
PTPN4-210ENST00000485247 UGT2B4P06133 528 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 RHOCP08134 193 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 SETSIPP0DME0 302 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 CD1EP15812 388 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 BPIP17213 487 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 STAT1P42224 750 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 SERPINH1P50454 418 aaKnown RBP5.31□□□□□ -1.56
PTPN4-210ENST00000485247 VAMP7P51809 220 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 RPS18P62269 152 aaKnown RBP5.31□□□□□ -1.56
PTPN4-210ENST00000485247 FOXM1Q08050 763 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 PPP3CAQ08209 521 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 SQSTM1Q13501 440 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 ART3Q13508 389 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 DNASE1L3Q13609 305 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 RAPSNQ13702 412 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 PRSS53Q2L4Q9 553 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 ALFQ53S48 1182 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 TAOK1Q7L7X3 1001 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 ARHGAP22Q7Z5H3 698 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 FJX1Q86VR8 437 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 TTC39CQ8N584 583 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 PCDH20Q8N6Y1 951 aaKnown RBP5.31□□□□□ -1.56
PTPN4-210ENST00000485247 DCAF4L2Q8NA75 395 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 ST6GALNAC3Q8NDV1 305 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 OR7D4Q8NG98 312 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 SLC35F5Q8WV83 523 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 UBE2Q2Q8WVN8 375 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 THAP4Q8WY91 577 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 SEMA4DQ92854 862 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 EEF2KMTQ96G04 330 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 PEX11GQ96HA9 241 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 ELMO2Q96JJ3 720 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 KLHL32Q96NJ5 620 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 RUFY1Q96T51 708 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 DPYSL5Q9BPU6 564 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 ACTL8Q9H568 366 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 DMAC2Q9NW81 257 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 TAAR2Q9P1P5 351 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 PDP2Q9P2J9 529 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 FBXL7Q9UJT9 491 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 FBXO2Q9UK22 296 aaPredicted RBP5.31□□□□□ -1.56
PTPN4-210ENST00000485247 KLF2Q9Y5W3 355 aaPredicted RBP5.31□□□□□ -1.56
PTPN4-210ENST00000485247 HS3ST4Q9Y661 456 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 COPG1Q9Y678 874 aaKnown RBP5.31□□□□□ -1.56
PTPN4-210ENST00000485247 CHD5Q8TDI0 1954 aa5.31□□□□□ -1.56
PTPN4-210ENST00000485247 PKDREJQ9NTG1 2253 aa5.3□□□□□ -1.56
PTPN4-210ENST00000485247 TMEM200CA6NKL6 621 aa5.3□□□□□ -1.56
PTPN4-210ENST00000485247 M0QYV0 167 aa5.3□□□□□ -1.56
PTPN4-210ENST00000485247 CACNB4O00305 520 aaPredicted RBP5.3□□□□□ -1.56
PTPN4-210ENST00000485247 KRIT1O00522 736 aa5.3□□□□□ -1.56
PTPN4-210ENST00000485247 FBXO21O94952 628 aa5.3□□□□□ -1.56
PTPN4-210ENST00000485247 F9P00740 461 aa5.3□□□□□ -1.56
PTPN4-210ENST00000485247 SCG5P05408 212 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms