RNA–Protein interactions for RNA: ENST00000484841.5

ACTB-212, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,032 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-212ENST00000484841 TFDP3Q5H9I0 405 aa19.86■□□□□ 0.77
ACTB-212ENST00000484841 BORAQ6PGQ7 559 aa19.86■□□□□ 0.77
ACTB-212ENST00000484841 SPOCD1Q6ZMY3 1216 aa19.86■□□□□ 0.77
ACTB-212ENST00000484841 TMEM26Q6ZUK4 368 aa19.86■□□□□ 0.77
ACTB-212ENST00000484841 ZC3H18Q86VM9 953 aaKnown RBP19.86■□□□□ 0.77
ACTB-212ENST00000484841 TRAPPC5Q8IUR0 188 aa19.86■□□□□ 0.77
ACTB-212ENST00000484841 BMPERQ8N8U9 685 aa19.86■□□□□ 0.77
ACTB-212ENST00000484841 TADA1Q96BN2 335 aa19.86■□□□□ 0.77
ACTB-212ENST00000484841 CXorf40BQ96DE9 158 aa19.86■□□□□ 0.77
ACTB-212ENST00000484841 RTP4Q96DX8 246 aa19.86■□□□□ 0.77
ACTB-212ENST00000484841 VPS35Q96QK1 796 aa19.86■□□□□ 0.77
ACTB-212ENST00000484841 VAT1Q99536 393 aa19.86■□□□□ 0.77
ACTB-212ENST00000484841 FERMT1Q9BQL6 677 aa19.86■□□□□ 0.77
ACTB-212ENST00000484841 ZCCHC2Q9C0B9 1178 aaKnown RBP19.86■□□□□ 0.77
ACTB-212ENST00000484841 GPN2Q9H9Y4 310 aaPredicted RBP19.86■□□□□ 0.77
ACTB-212ENST00000484841 LUC7LQ9NQ29 371 aaKnown RBP19.86■□□□□ 0.77
ACTB-212ENST00000484841 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.86■□□□□ 0.77
ACTB-212ENST00000484841 HACD3Q9P035 362 aa19.86■□□□□ 0.77
ACTB-212ENST00000484841 SAE1Q9UBE0 346 aaPredicted RBP19.86■□□□□ 0.77
ACTB-212ENST00000484841 COL6A6A6NMZ7 2263 aa19.86■□□□□ 0.77
ACTB-212ENST00000484841 PPFIA2O75334 1257 aa19.85■□□□□ 0.77
ACTB-212ENST00000484841 UBXN7O94888 489 aa19.85■□□□□ 0.77
ACTB-212ENST00000484841 ZRANB2O95218 330 aaKnown RBP eCLIP19.85■□□□□ 0.771e-16■■■□□ 16.1
ACTB-212ENST00000484841 TYRP1P17643 537 aa19.85■□□□□ 0.77
ACTB-212ENST00000484841 NFKB1P19838 968 aa19.85■□□□□ 0.77
ACTB-212ENST00000484841 HMGCLP35914 325 aa19.85■□□□□ 0.77
ACTB-212ENST00000484841 WNT3AP56704 352 aa19.85■□□□□ 0.77
ACTB-212ENST00000484841 UBE2IP63279 158 aaKnown RBP19.85■□□□□ 0.77
ACTB-212ENST00000484841 FOXM1Q08050 763 aa19.85■□□□□ 0.77
ACTB-212ENST00000484841 SPA17Q15506 151 aa19.85■□□□□ 0.77
ACTB-212ENST00000484841 PPP2R5EQ16537 467 aa19.85■□□□□ 0.77
ACTB-212ENST00000484841 RCOR2Q8IZ40 523 aa19.85■□□□□ 0.77
ACTB-212ENST00000484841 SLC25A41Q8N5S1 370 aa19.85■□□□□ 0.77
ACTB-212ENST00000484841 CATSPER2Q96P56 530 aa19.85■□□□□ 0.77
ACTB-212ENST00000484841 SLC12A9Q9BXP2 914 aa19.85■□□□□ 0.77
ACTB-212ENST00000484841 POT1Q9NUX5 634 aa19.85■□□□□ 0.77
ACTB-212ENST00000484841 PKP3Q9Y446 797 aa19.85■□□□□ 0.77
ACTB-212ENST00000484841 SPO11Q9Y5K1 396 aa19.85■□□□□ 0.77
ACTB-212ENST00000484841 ALG6Q9Y672 507 aa19.85■□□□□ 0.77
ACTB-212ENST00000484841 SMG1Q96Q15 3661 aaKnown RBP19.84■□□□□ 0.77
ACTB-212ENST00000484841 AURKAO14965 403 aa19.84■□□□□ 0.77
ACTB-212ENST00000484841 EPOP01588 193 aa19.84■□□□□ 0.77
ACTB-212ENST00000484841 RPL10P27635 214 aaKnown RBP19.84■□□□□ 0.77
ACTB-212ENST00000484841 SPAM1P38567 509 aa19.84■□□□□ 0.77
ACTB-212ENST00000484841 CCR10P46092 362 aa19.84■□□□□ 0.77
ACTB-212ENST00000484841 KCNC4Q03721 635 aa19.84■□□□□ 0.77
ACTB-212ENST00000484841 TMEM115Q12893 351 aaPredicted RBP19.84■□□□□ 0.77
ACTB-212ENST00000484841 CCDC181Q5TID7 509 aa19.84■□□□□ 0.77
ACTB-212ENST00000484841 GLT6D1Q7Z4J2 308 aa19.84■□□□□ 0.77
ACTB-212ENST00000484841 RBM12BQ8IXT5 1001 aaKnown RBP19.84■□□□□ 0.77
ACTB-212ENST00000484841 HTR3CQ8WXA8 447 aa19.84■□□□□ 0.77
ACTB-212ENST00000484841 RBM41Q96IZ5 413 aaKnown RBP19.84■□□□□ 0.77
ACTB-212ENST00000484841 TGM7Q96PF1 710 aa19.84■□□□□ 0.77
ACTB-212ENST00000484841 FSD1LQ9BXM9 530 aa19.84■□□□□ 0.77
ACTB-212ENST00000484841 ADNPQ9H2P0 1102 aa19.84■□□□□ 0.77
ACTB-212ENST00000484841 STARD5Q9NSY2 213 aa19.84■□□□□ 0.77
ACTB-212ENST00000484841 SLC23A2Q9UGH3 650 aa19.84■□□□□ 0.77
ACTB-212ENST00000484841 PILRAQ9UKJ1 303 aa19.84■□□□□ 0.77
ACTB-212ENST00000484841 GCN1Q92616 2671 aaKnown RBP19.83■□□□□ 0.77
ACTB-212ENST00000484841 MN1Q10571 1320 aaPredicted RBP19.83■□□□□ 0.77
ACTB-212ENST00000484841 KCNJ13O60928 360 aa19.83■□□□□ 0.77
ACTB-212ENST00000484841 RASSF9O75901 435 aa19.83■□□□□ 0.77
ACTB-212ENST00000484841 STK17BO94768 372 aa19.83■□□□□ 0.77
ACTB-212ENST00000484841 ANKRD34CP0C6C1 535 aa19.83■□□□□ 0.77
ACTB-212ENST00000484841 PECAM1P16284 738 aaPredicted RBP19.83■□□□□ 0.77
ACTB-212ENST00000484841 SLC19A1P41440 591 aa19.83■□□□□ 0.77
ACTB-212ENST00000484841 ATP13A5Q4VNC0 1218 aa19.83■□□□□ 0.77
ACTB-212ENST00000484841 SIRPB2Q5JXA9 342 aa19.83■□□□□ 0.77
ACTB-212ENST00000484841 ABRAXAS1Q6UWZ7 409 aa19.83■□□□□ 0.77
ACTB-212ENST00000484841 ATG14Q6ZNE5 492 aa19.83■□□□□ 0.77
ACTB-212ENST00000484841 IPMKQ8NFU5 416 aa19.83■□□□□ 0.77
ACTB-212ENST00000484841 BLOC1S5Q8TDH9 187 aa19.83■□□□□ 0.77
ACTB-212ENST00000484841 HAUS1Q96CS2 278 aa19.83■□□□□ 0.77
ACTB-212ENST00000484841 C9orf72Q96LT7 481 aa19.83■□□□□ 0.77
ACTB-212ENST00000484841 FCRL5Q96RD9 977 aa19.83■□□□□ 0.77
ACTB-212ENST00000484841 TRIM5Q9C035 493 aa19.83■□□□□ 0.77
ACTB-212ENST00000484841 CLMPQ9H6B4 373 aa19.83■□□□□ 0.77
ACTB-212ENST00000484841 GEMIN8Q9NWZ8 242 aaKnown RBP19.83■□□□□ 0.77
ACTB-212ENST00000484841 SCHIP1Q9P0W5 487 aaPredicted RBP19.83■□□□□ 0.77
ACTB-212ENST00000484841 ZNF624Q9P2J8 865 aaPredicted RBP19.83■□□□□ 0.77
ACTB-212ENST00000484841 TRIM10Q9UDY6 481 aa19.83■□□□□ 0.77
ACTB-212ENST00000484841 RSPH14Q9UHP6 348 aa19.83■□□□□ 0.77
ACTB-212ENST00000484841 AHCTF1Q8WYP5 2266 aa19.83■□□□□ 0.76
ACTB-212ENST00000484841 ZNF106Q9H2Y7 1883 aaKnown RBP19.82■□□□□ 0.76
ACTB-212ENST00000484841 GLYATL1P3A0A0U1RQE8 302 aa19.82■□□□□ 0.76
ACTB-212ENST00000484841 LOC285095A0A1B0GVY8 99 aa19.82■□□□□ 0.76
ACTB-212ENST00000484841 HACD1B0YJ81 288 aa19.82■□□□□ 0.76
ACTB-212ENST00000484841 TOX3O15405 576 aaPredicted RBP19.82■□□□□ 0.76
ACTB-212ENST00000484841 HLA-DPA1P20036 260 aa19.82■□□□□ 0.76
ACTB-212ENST00000484841 HADHBP55084 474 aaKnown RBP19.82■□□□□ 0.76
ACTB-212ENST00000484841 MC1RQ01726 317 aa19.82■□□□□ 0.76
ACTB-212ENST00000484841 ABHD18Q0P651 414 aa19.82■□□□□ 0.76
ACTB-212ENST00000484841 WASHC5Q12768 1159 aa19.82■□□□□ 0.76
ACTB-212ENST00000484841 MPP3Q13368 585 aa19.82■□□□□ 0.76
ACTB-212ENST00000484841 ITGA9Q13797 1035 aa19.82■□□□□ 0.76
ACTB-212ENST00000484841 TAZQ16635 292 aa19.82■□□□□ 0.76
ACTB-212ENST00000484841 LDLRAP1Q5SW96 308 aa19.82■□□□□ 0.76
ACTB-212ENST00000484841 CYB5D1Q6P9G0 228 aa19.82■□□□□ 0.76
ACTB-212ENST00000484841 WASH2PQ6VEQ5 465 aa19.82■□□□□ 0.76
ACTB-212ENST00000484841 KATNAL2Q8IYT4 538 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms