RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 LDB1Q86U70 411 aaPredicted RBP6.35□□□□□ -1.39
NCL-209ENST00000484328 LRRC6Q86X45 466 aa6.35□□□□□ -1.39
NCL-209ENST00000484328 ZNF547Q8IVP9 402 aa6.35□□□□□ -1.39
NCL-209ENST00000484328 PNPLA1Q8N8W4 532 aa6.35□□□□□ -1.39
NCL-209ENST00000484328 RASGEF1AQ8N9B8 481 aa6.35□□□□□ -1.39
NCL-209ENST00000484328 GABPB2Q8TAK5 448 aaPredicted RBP6.35□□□□□ -1.39
NCL-209ENST00000484328 FBF1Q8TES7 1133 aa6.35□□□□□ -1.39
NCL-209ENST00000484328 OR1E3Q8WZA6 343 aa6.35□□□□□ -1.39
NCL-209ENST00000484328 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.35□□□□□ -1.39
NCL-209ENST00000484328 ZNF514Q96K75 400 aaPredicted RBP6.35□□□□□ -1.39
NCL-209ENST00000484328 LINC00615Q96LM1 132 aaPredicted RBP6.35□□□□□ -1.39
NCL-209ENST00000484328 BIRC8Q96P09 236 aa6.35□□□□□ -1.39
NCL-209ENST00000484328 CYTH2Q99418 400 aa6.35□□□□□ -1.39
NCL-209ENST00000484328 DHRS4Q9BTZ2 278 aa6.35□□□□□ -1.39
NCL-209ENST00000484328 BOCQ9BWV1 1114 aa6.35□□□□□ -1.39
NCL-209ENST00000484328 ZDHHC5Q9C0B5 715 aa6.35□□□□□ -1.39
NCL-209ENST00000484328 FAM96AQ9H5X1 160 aa6.35□□□□□ -1.39
NCL-209ENST00000484328 VPS37BQ9H9H4 285 aa6.35□□□□□ -1.39
NCL-209ENST00000484328 NSMCE4AQ9NXX6 385 aa6.35□□□□□ -1.39
NCL-209ENST00000484328 EURLQ9NYK6 297 aa6.35□□□□□ -1.39
NCL-209ENST00000484328 ZFATQ9P243 1243 aa6.35□□□□□ -1.39
NCL-209ENST00000484328 ATXN10Q9UBB4 475 aa6.35□□□□□ -1.39
NCL-209ENST00000484328 GULP1Q9UBP9 304 aa6.35□□□□□ -1.39
NCL-209ENST00000484328 RABGEF1Q9UJ41 708 aa6.35□□□□□ -1.39
NCL-209ENST00000484328 RAB23Q9ULC3 237 aa6.35□□□□□ -1.39
NCL-209ENST00000484328 CORO1CQ9ULV4 474 aaPredicted RBP6.35□□□□□ -1.39
NCL-209ENST00000484328 SLC6A14Q9UN76 642 aa6.35□□□□□ -1.39
NCL-209ENST00000484328 VPS9D1Q9Y2B5 631 aa6.35□□□□□ -1.39
NCL-209ENST00000484328 MED16Q9Y2X0 877 aa6.35□□□□□ -1.39
NCL-209ENST00000484328 PCYT1BQ9Y5K3 369 aaPredicted RBP6.35□□□□□ -1.39
NCL-209ENST00000484328 PSAT1Q9Y617 370 aa6.35□□□□□ -1.39
NCL-209ENST00000484328 ZNF292O60281 2723 aa6.35□□□□□ -1.39
NCL-209ENST00000484328 PI4KAP42356 2102 aa6.35□□□□□ -1.39
NCL-209ENST00000484328 A0A087WUV0 522 aaPredicted RBP6.34□□□□□ -1.39
NCL-209ENST00000484328 A0A1B0GVT2 93 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 LNP1A1A4G5 178 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 KLHL33A6NCF5 533 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 PATE3B3GLJ2 98 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 CFAP99D6REC4 459 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 QSOX1O00391 747 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 PRMT5O14744 637 aaPredicted RBP6.34□□□□□ -1.39
NCL-209ENST00000484328 OR1I1O60431 355 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 MTX2O75431 263 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 AP2A2O94973 939 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 RASGRP1O95267 797 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 ESR1P03372 595 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 CSF2P04141 144 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 GSTM1P09488 218 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 ATP1B2P14415 290 aaPredicted RBP6.34□□□□□ -1.39
NCL-209ENST00000484328 ZNF7P17097 686 aaPredicted RBP6.34□□□□□ -1.39
NCL-209ENST00000484328 CD9P21926 228 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 GCAP28676 217 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 AKT1P31749 480 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 HSD17B3P37058 310 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 PPARGP37231 505 aaPredicted RBP6.34□□□□□ -1.39
NCL-209ENST00000484328 GP5P40197 560 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 RXRGP48443 463 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 CSNK1EP49674 416 aaKnown RBP6.34□□□□□ -1.39
NCL-209ENST00000484328 CSRP3P50461 194 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 HK3P52790 923 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 CTSCP53634 463 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 LIMK2P53671 638 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 MPP1Q00013 466 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 NHLH1Q02575 133 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 GSTM4Q03013 218 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 DMPKQ09013 629 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 TMEM115Q12893 351 aaPredicted RBP6.34□□□□□ -1.39
NCL-209ENST00000484328 CTBP1Q13363 440 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 LRP8Q14114 963 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 SLC29A2Q14542 456 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 EFTUD2Q15029 972 aaKnown RBP eCLIP6.34□□□□□ -1.395e-7■■□□□ 14.2
NCL-209ENST00000484328 RASA2Q15283 850 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 SHBQ15464 509 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 SMAD1Q15797 465 aaKnown RBP6.34□□□□□ -1.39
NCL-209ENST00000484328 KIF19Q2TAC6 998 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 KLHL38Q2WGJ6 581 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 PYCR3Q53H96 274 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 TRIM61Q5EBN2 209 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 ZNF789Q5FWF6 425 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 CTSL3PQ5NE16 218 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 ZNF648Q5T619 568 aaPredicted RBP6.34□□□□□ -1.39
NCL-209ENST00000484328 KANSL1Q7Z3B3 1105 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 SDCCAG8Q86SQ7 713 aaPredicted RBP6.34□□□□□ -1.39
NCL-209ENST00000484328 ZC3HC1Q86WB0 502 aaKnown RBP6.34□□□□□ -1.39
NCL-209ENST00000484328 PHACTR4Q8IZ21 702 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 CLDN19Q8N6F1 224 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 SLC44A1Q8WWI5 657 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 PIGKQ92643 395 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 CDKL2Q92772 493 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 ATOH1Q92858 354 aaPredicted RBP6.34□□□□□ -1.39
NCL-209ENST00000484328 SKA1Q96BD8 255 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 OR2M4Q96R27 311 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 ELF4Q99607 663 aaPredicted RBP6.34□□□□□ -1.39
NCL-209ENST00000484328 TTC1Q99614 292 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 RBBP8Q99708 897 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 CPNE1Q99829 537 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 LRRC61Q9BV99 259 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 OR2AG1Q9H205 316 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 ARRDC1-AS1Q9H2J1 176 aa6.34□□□□□ -1.39
NCL-209ENST00000484328 RHOJQ9H4E5 214 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms