RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 FAM96AQ9H5X1 160 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.11□□□□□ -0.47
MSH5-216ENST00000484309 TMEM9Q9P0T7 183 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 SCHIP1Q9P0W5 487 aaPredicted RBP12.11□□□□□ -0.47
MSH5-216ENST00000484309 PISDQ9UG56 409 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 PPP2R2CQ9Y2T4 447 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 LOXL2Q9Y4K0 774 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 SDK2Q58EX2 2172 aa12.11□□□□□ -0.47
MSH5-216ENST00000484309 CFAP47Q6ZTR5 3102 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 A0A087WV48 116 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 IGHV1OR21-1A0A087WYE8 117 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 A6NCN8 305 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 OR2AG2A6NM03 316 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 PDZK1P1A8MUH7 402 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 PLD2O14939 933 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 NRDCO43847 1150 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 VEGFDO43915 354 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 CPNE6O95741 557 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 ETS1P14921 441 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 ITIH1P19827 911 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 RPL10P27635 214 aaKnown RBP12.1□□□□□ -0.47
MSH5-216ENST00000484309 CD1CP29017 333 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 AKT1P31749 480 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 CCKBRP32239 447 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 ABCG1P45844 678 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 FASLGP48023 281 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 CTSCP53634 463 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 DRG2P55039 364 aaKnown RBP12.1□□□□□ -0.47
MSH5-216ENST00000484309 PCBP4P57723 403 aaKnown RBP12.1□□□□□ -0.47
MSH5-216ENST00000484309 MSLNQ13421 630 aaPredicted RBP12.1□□□□□ -0.47
MSH5-216ENST00000484309 ITGA9Q13797 1035 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 SEPT6Q14141 434 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 NR1D2Q14995 579 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 C16orf72Q14CZ0 275 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 OASLQ15646 514 aaKnown RBP12.1□□□□□ -0.47
MSH5-216ENST00000484309 P3H1Q32P28 736 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.1□□□□□ -0.47
MSH5-216ENST00000484309 ZDHHC20Q5W0Z9 365 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 KCTD11Q693B1 232 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 IYDQ6PHW0 289 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 ZNF574Q6ZN55 896 aaPredicted RBP12.1□□□□□ -0.47
MSH5-216ENST00000484309 LRRC69Q6ZNQ3 347 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 DET1Q7L5Y6 550 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 PIM3Q86V86 326 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 JAMLQ86YT9 394 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 SLITRK4Q8IW52 837 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 LSMEM2Q8N112 164 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 RASGEF1AQ8N9B8 481 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 ZNF398Q8TD17 642 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 GRAMD1AQ96CP6 724 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 CCDC97Q96F63 343 aaPredicted RBP12.1□□□□□ -0.47
MSH5-216ENST00000484309 TTC25Q96NG3 672 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 SLC46A1Q96NT5 459 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 PPP1R2P1Q96PQ5 205 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 ASB8Q9H765 288 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 LRRC40Q9H9A6 602 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 THSD1Q9NS62 852 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 WDR70Q9NW82 654 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 FAM8A1Q9UBU6 413 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 ZNF148Q9UQR1 794 aa12.1□□□□□ -0.47
MSH5-216ENST00000484309 AHCTF1Q8WYP5 2266 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 BPTFQ12830 3046 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 GPR89AB7ZAQ6 455 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 RRP8O43159 456 aaKnown RBP12.09□□□□□ -0.47
MSH5-216ENST00000484309 PPFIA2O75334 1257 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 ZNF189O75820 626 aaPredicted RBP12.09□□□□□ -0.47
MSH5-216ENST00000484309 SRP72O76094 671 aaKnown RBP12.09□□□□□ -0.47
MSH5-216ENST00000484309 DXOO77932 396 aaKnown RBP12.09□□□□□ -0.47
MSH5-216ENST00000484309 CRTAMO95727 393 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 JMJD7P0C870 316 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 GPR89BP0CG08 455 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 HOXB3P14651 431 aaPredicted RBP12.09□□□□□ -0.47
MSH5-216ENST00000484309 CXCR5P32302 372 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 ETV5P41161 510 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 GPR3P46089 330 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 ZNF140P52738 457 aaPredicted RBP12.09□□□□□ -0.47
MSH5-216ENST00000484309 MAPK10P53779 464 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 CFHR1Q03591 330 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 ZFP36L1Q07352 338 aaKnown RBP12.09□□□□□ -0.47
MSH5-216ENST00000484309 POU6F1Q14863 301 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 SIX1Q15475 284 aaPredicted RBP12.09□□□□□ -0.47
MSH5-216ENST00000484309 SNAP47Q5SQN1 464 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 LDLRAP1Q5SW96 308 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 TMEM220Q6QAJ8 160 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 C11orf96Q7Z7L8 435 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 SLC9B2Q86UD5 537 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 KLHDC8BQ8IXV7 354 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 BEND7Q8N7W2 519 aaPredicted RBP12.09□□□□□ -0.47
MSH5-216ENST00000484309 GLIS1Q8NBF1 620 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 DDHD1Q8NEL9 900 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 BRSK1Q8TDC3 778 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 LRRC45Q96CN5 670 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 AHCYL2Q96HN2 611 aaKnown RBP12.09□□□□□ -0.47
MSH5-216ENST00000484309 DNAJC1Q96KC8 554 aaKnown RBP12.09□□□□□ -0.47
MSH5-216ENST00000484309 CCDC74BQ96LY2 380 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 TIMM29Q9BSF4 260 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 TBC1D10AQ9BXI6 508 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 TLR10Q9BXR5 811 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 STN1Q9H668 368 aaKnown RBP12.09□□□□□ -0.47
MSH5-216ENST00000484309 SARS2Q9NP81 518 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms