RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 OS9Q13438 667 aaPredicted RBP3.86□□□□□ -1.79
SCAF11-207ENST00000484275 BAK1Q16611 211 aa3.86□□□□□ -1.79
SCAF11-207ENST00000484275 ADAMTSL4-AS1Q5T5F5 129 aa3.86□□□□□ -1.79
SCAF11-207ENST00000484275 FAM69AQ5T7M9 428 aa3.86□□□□□ -1.79
SCAF11-207ENST00000484275 BHLHB9Q6PI77 547 aa3.86□□□□□ -1.79
SCAF11-207ENST00000484275 NOL8Q76FK4 1167 aaKnown RBP3.86□□□□□ -1.79
SCAF11-207ENST00000484275 ANKRD52Q8NB46 1076 aa3.86□□□□□ -1.79
SCAF11-207ENST00000484275 PRMT6Q96LA8 375 aaPredicted RBP3.86□□□□□ -1.79
SCAF11-207ENST00000484275 SLC25A18Q9H1K4 315 aa3.86□□□□□ -1.79
SCAF11-207ENST00000484275 VEZTQ9HBM0 779 aa3.86□□□□□ -1.79
SCAF11-207ENST00000484275 APOBEC3GQ9HC16 384 aaKnown RBP3.86□□□□□ -1.79
SCAF11-207ENST00000484275 ZNF71Q9NQZ8 489 aaPredicted RBP3.86□□□□□ -1.79
SCAF11-207ENST00000484275 COPG2Q9UBF2 871 aa3.86□□□□□ -1.79
SCAF11-207ENST00000484275 STK36Q9NRP7 1315 aa3.86□□□□□ -1.79
SCAF11-207ENST00000484275 ANKRD66B4E2M5 251 aa3.85□□□□□ -1.79
SCAF11-207ENST00000484275 NKX2-2O95096 273 aa3.85□□□□□ -1.79
SCAF11-207ENST00000484275 F9P00740 461 aa3.85□□□□□ -1.79
SCAF11-207ENST00000484275 LIPFP07098 398 aa3.85□□□□□ -1.79
SCAF11-207ENST00000484275 TPOP07202 933 aa3.85□□□□□ -1.79
SCAF11-207ENST00000484275 KRT19P08727 400 aa3.85□□□□□ -1.79
SCAF11-207ENST00000484275 OLIG2Q13516 323 aa3.85□□□□□ -1.79
SCAF11-207ENST00000484275 SLC9C2Q5TAH2 1124 aa3.85□□□□□ -1.79
SCAF11-207ENST00000484275 PACS1Q6VY07 963 aa3.85□□□□□ -1.79
SCAF11-207ENST00000484275 ANKRD18AQ8IVF6 992 aa3.85□□□□□ -1.79
SCAF11-207ENST00000484275 OR1J2Q8NGS2 313 aa3.85□□□□□ -1.79
SCAF11-207ENST00000484275 OR2T6Q8NHC8 308 aa3.85□□□□□ -1.79
SCAF11-207ENST00000484275 UBXN10Q96LJ8 280 aa3.85□□□□□ -1.79
SCAF11-207ENST00000484275 HARBI1Q96MB7 349 aa3.85□□□□□ -1.79
SCAF11-207ENST00000484275 RBM4BQ9BQ04 359 aaKnown RBP3.85□□□□□ -1.79
SCAF11-207ENST00000484275 KRTAP4-3Q9BYR4 195 aa3.85□□□□□ -1.79
SCAF11-207ENST00000484275 PCDHB16Q9NRJ7 776 aa3.85□□□□□ -1.79
SCAF11-207ENST00000484275 SLC38A7Q9NVC3 462 aa3.85□□□□□ -1.79
SCAF11-207ENST00000484275 PTTG2Q9NZH5 202 aa3.85□□□□□ -1.79
SCAF11-207ENST00000484275 STK39Q9UEW8 545 aa3.85□□□□□ -1.79
SCAF11-207ENST00000484275 CLIC4Q9Y696 253 aa3.85□□□□□ -1.79
SCAF11-207ENST00000484275 COMMD10Q9Y6G5 202 aa3.85□□□□□ -1.79
SCAF11-207ENST00000484275 SMCHD1A6NHR9 2005 aa3.85□□□□□ -1.79
SCAF11-207ENST00000484275 CLPTM1O96005 669 aa3.84□□□□□ -1.79
SCAF11-207ENST00000484275 LIFP15018 202 aa3.84□□□□□ -1.79
SCAF11-207ENST00000484275 CTCFP49711 727 aaPredicted RBP3.84□□□□□ -1.79
SCAF11-207ENST00000484275 TAF12Q16514 161 aa3.84□□□□□ -1.79
SCAF11-207ENST00000484275 FAAP20Q6NZ36 180 aa3.84□□□□□ -1.79
SCAF11-207ENST00000484275 CYP26C1Q6V0L0 522 aa3.84□□□□□ -1.79
SCAF11-207ENST00000484275 PM20D2Q8IYS1 436 aa3.84□□□□□ -1.79
SCAF11-207ENST00000484275 SCML4Q8N228 414 aa3.84□□□□□ -1.79
SCAF11-207ENST00000484275 BMPERQ8N8U9 685 aa3.84□□□□□ -1.79
SCAF11-207ENST00000484275 RDM1Q8NG50 284 aa3.84□□□□□ -1.79
SCAF11-207ENST00000484275 HVCN1Q96D96 273 aa3.84□□□□□ -1.79
SCAF11-207ENST00000484275 RNF125Q96EQ8 232 aa3.84□□□□□ -1.79
SCAF11-207ENST00000484275 PRAC1Q96KF2 57 aa3.84□□□□□ -1.79
SCAF11-207ENST00000484275 C18orf12Q96KH6 178 aa3.84□□□□□ -1.79
SCAF11-207ENST00000484275 NR1H4Q96RI1 486 aaPredicted RBP3.84□□□□□ -1.79
SCAF11-207ENST00000484275 HERPUD2Q9BSE4 406 aa3.84□□□□□ -1.79
SCAF11-207ENST00000484275 SYT11Q9BT88 431 aa3.84□□□□□ -1.79
SCAF11-207ENST00000484275 PRKRIP1Q9H875 184 aaPredicted RBP3.84□□□□□ -1.79
SCAF11-207ENST00000484275 ATAD3AQ9NVI7 634 aa3.84□□□□□ -1.79
SCAF11-207ENST00000484275 CNOT8Q9UFF9 292 aaKnown RBP3.84□□□□□ -1.79
SCAF11-207ENST00000484275 ASIC3Q9UHC3 531 aa3.84□□□□□ -1.79
SCAF11-207ENST00000484275 CAMK2AQ9UQM7 478 aa3.84□□□□□ -1.79
SCAF11-207ENST00000484275 EIF4E1BA6NMX2 242 aaKnown RBP3.83□□□□□ -1.8
SCAF11-207ENST00000484275 ATP2A1O14983 1001 aa3.83□□□□□ -1.8
SCAF11-207ENST00000484275 PLA2G4BP0C869 781 aa3.83□□□□□ -1.8
SCAF11-207ENST00000484275 BMXP51813 675 aa3.83□□□□□ -1.8
SCAF11-207ENST00000484275 VAMP2P63027 116 aa3.83□□□□□ -1.8
SCAF11-207ENST00000484275 DCTN2Q13561 401 aaKnown RBP3.83□□□□□ -1.8
SCAF11-207ENST00000484275 DUOXA1Q1HG43 343 aa3.83□□□□□ -1.8
SCAF11-207ENST00000484275 TCTE1Q5JU00 501 aa3.83□□□□□ -1.8
SCAF11-207ENST00000484275 TSSK4Q6SA08 328 aa3.83□□□□□ -1.8
SCAF11-207ENST00000484275 RASGEF1CQ8N431 466 aa3.83□□□□□ -1.8
SCAF11-207ENST00000484275 SLC38A9Q8NBW4 561 aa3.83□□□□□ -1.8
SCAF11-207ENST00000484275 PPHLN1Q8NEY8 458 aaKnown RBP3.83□□□□□ -1.8
SCAF11-207ENST00000484275 TRIM63Q969Q1 353 aa3.83□□□□□ -1.8
SCAF11-207ENST00000484275 GMPPAQ96IJ6 420 aaPredicted RBP3.83□□□□□ -1.8
SCAF11-207ENST00000484275 IWS1Q96ST2 819 aa3.83□□□□□ -1.8
SCAF11-207ENST00000484275 MCRIP2Q9BUT9 160 aaKnown RBP3.83□□□□□ -1.8
SCAF11-207ENST00000484275 PIGMQ9H3S5 423 aa3.83□□□□□ -1.8
SCAF11-207ENST00000484275 PELI2Q9HAT8 420 aa3.83□□□□□ -1.8
SCAF11-207ENST00000484275 SLC7A10Q9NS82 523 aa3.83□□□□□ -1.8
SCAF11-207ENST00000484275 COL5A2P05997 1499 aaPredicted RBP3.83□□□□□ -1.8
SCAF11-207ENST00000484275 TEX13DA0A0J9YY54 714 aaPredicted RBP3.82□□□□□ -1.8
SCAF11-207ENST00000484275 DCXO43602 365 aa3.82□□□□□ -1.8
SCAF11-207ENST00000484275 BUD23O43709 281 aaKnown RBP3.82□□□□□ -1.8
SCAF11-207ENST00000484275 JRKO75564 520 aa3.82□□□□□ -1.8
SCAF11-207ENST00000484275 NGFP01138 241 aa3.82□□□□□ -1.8
SCAF11-207ENST00000484275 ICAM1P05362 532 aa3.82□□□□□ -1.8
SCAF11-207ENST00000484275 GATA1P15976 413 aaPredicted RBP3.82□□□□□ -1.8
SCAF11-207ENST00000484275 ITGA3P26006 1051 aa3.82□□□□□ -1.8
SCAF11-207ENST00000484275 ABCD3P28288 659 aa3.82□□□□□ -1.8
SCAF11-207ENST00000484275 BIRC2Q13490 618 aa3.82□□□□□ -1.8
SCAF11-207ENST00000484275 TRPC3Q13507 836 aa3.82□□□□□ -1.8
SCAF11-207ENST00000484275 ZNF805Q5CZA5 627 aa3.82□□□□□ -1.8
SCAF11-207ENST00000484275 SLC5A8Q8N695 610 aa3.82□□□□□ -1.8
SCAF11-207ENST00000484275 NFKBIDQ8NI38 313 aa3.82□□□□□ -1.8
SCAF11-207ENST00000484275 FGFBP3Q8TAT2 258 aa3.82□□□□□ -1.8
SCAF11-207ENST00000484275 HM13Q8TCT9 377 aa3.82□□□□□ -1.8
SCAF11-207ENST00000484275 GCC1Q96CN9 775 aa3.82□□□□□ -1.8
SCAF11-207ENST00000484275 MMABQ96EY8 250 aaPredicted RBP3.82□□□□□ -1.8
SCAF11-207ENST00000484275 TMEM68Q96MH6 324 aa3.82□□□□□ -1.8
SCAF11-207ENST00000484275 SCPEP1Q9HB40 452 aa3.82□□□□□ -1.8
SCAF11-207ENST00000484275 KLHL8Q9P2G9 620 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms