RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 UGT1A1P22309 533 aa17.74■□□□□ 0.43
ATG4B-221ENST00000483778 UGT1A4P22310 534 aa17.74■□□□□ 0.43
ATG4B-221ENST00000483778 LEPRP48357 1165 aaKnown RBP17.74■□□□□ 0.43
ATG4B-221ENST00000483778 MARCKSL1P49006 195 aa17.74■□□□□ 0.43
ATG4B-221ENST00000483778 EPHA4P54764 986 aa17.74■□□□□ 0.43
ATG4B-221ENST00000483778 WNT3AP56704 352 aa17.74■□□□□ 0.43
ATG4B-221ENST00000483778 TBX2Q13207 712 aaPredicted RBP17.74■□□□□ 0.43
ATG4B-221ENST00000483778 TCEAL1Q15170 157 aa17.74■□□□□ 0.43
ATG4B-221ENST00000483778 SIRPB2Q5JXA9 342 aa17.74■□□□□ 0.43
ATG4B-221ENST00000483778 XKR5Q6UX68 686 aa17.74■□□□□ 0.43
ATG4B-221ENST00000483778 SPOCD1Q6ZMY3 1216 aa17.74■□□□□ 0.43
ATG4B-221ENST00000483778 TMEM26Q6ZUK4 368 aa17.74■□□□□ 0.43
ATG4B-221ENST00000483778 PHYKPLQ8IUZ5 450 aa17.74■□□□□ 0.43
ATG4B-221ENST00000483778 SLC25A41Q8N5S1 370 aa17.74■□□□□ 0.43
ATG4B-221ENST00000483778 CCDC112Q8NEF3 446 aa17.74■□□□□ 0.43
ATG4B-221ENST00000483778 OXNAD1Q96HP4 312 aaPredicted RBP17.74■□□□□ 0.43
ATG4B-221ENST00000483778 FAM117AQ9C073 453 aa17.74■□□□□ 0.43
ATG4B-221ENST00000483778 UGT1A7Q9HAW7 530 aa17.74■□□□□ 0.43
ATG4B-221ENST00000483778 UGT1A10Q9HAW8 530 aa17.74■□□□□ 0.43
ATG4B-221ENST00000483778 UGT1A8Q9HAW9 530 aa17.74■□□□□ 0.43
ATG4B-221ENST00000483778 IL26Q9NPH9 171 aa17.74■□□□□ 0.43
ATG4B-221ENST00000483778 SIDT1Q9NXL6 827 aaKnown RBP17.74■□□□□ 0.43
ATG4B-221ENST00000483778 WDR37Q9Y2I8 494 aa17.74■□□□□ 0.43
ATG4B-221ENST00000483778 LOC285095A0A1B0GVY8 99 aa17.73■□□□□ 0.43
ATG4B-221ENST00000483778 LILRA5A6NI73 299 aa17.73■□□□□ 0.43
ATG4B-221ENST00000483778 OR5K4A6NMS3 321 aa17.73■□□□□ 0.43
ATG4B-221ENST00000483778 OR52A4PA6NMU1 304 aa17.73■□□□□ 0.43
ATG4B-221ENST00000483778 KMOO15229 486 aa17.73■□□□□ 0.43
ATG4B-221ENST00000483778 KIF1CO43896 1103 aaKnown RBP17.73■□□□□ 0.43
ATG4B-221ENST00000483778 CDK14O94921 469 aa17.73■□□□□ 0.43
ATG4B-221ENST00000483778 ZNF28P17035 718 aa17.73■□□□□ 0.43
ATG4B-221ENST00000483778 DRG2P55039 364 aaKnown RBP17.73■□□□□ 0.43
ATG4B-221ENST00000483778 PTPRCAPQ14761 206 aa17.73■□□□□ 0.43
ATG4B-221ENST00000483778 INSCQ1MX18 579 aa17.73■□□□□ 0.43
ATG4B-221ENST00000483778 LRRTM4Q86VH4 590 aa17.73■□□□□ 0.43
ATG4B-221ENST00000483778 ZC3H18Q86VM9 953 aaKnown RBP17.73■□□□□ 0.43
ATG4B-221ENST00000483778 C9orf72Q96LT7 481 aa17.73■□□□□ 0.43
ATG4B-221ENST00000483778 GEMIN8Q9NWZ8 242 aaKnown RBP17.73■□□□□ 0.43
ATG4B-221ENST00000483778 DDX56Q9NY93 547 aaKnown RBP17.73■□□□□ 0.43
ATG4B-221ENST00000483778 ALG6Q9Y672 507 aa17.73■□□□□ 0.43
ATG4B-221ENST00000483778 NBASA2RRP1 2371 aa17.73■□□□□ 0.43
ATG4B-221ENST00000483778 MN1Q10571 1320 aaPredicted RBP17.72■□□□□ 0.43
ATG4B-221ENST00000483778 SUV39H1O43463 412 aa17.72■□□□□ 0.43
ATG4B-221ENST00000483778 SPOPO43791 374 aa17.72■□□□□ 0.43
ATG4B-221ENST00000483778 STK17BO94768 372 aa17.72■□□□□ 0.43
ATG4B-221ENST00000483778 WISP1O95388 367 aa17.72■□□□□ 0.43
ATG4B-221ENST00000483778 C9P02748 559 aa17.72■□□□□ 0.43
ATG4B-221ENST00000483778 F8A1P23610 371 aa17.72■□□□□ 0.43
ATG4B-221ENST00000483778 SLC1A1P43005 524 aa17.72■□□□□ 0.43
ATG4B-221ENST00000483778 SEPHS1P49903 392 aa17.72■□□□□ 0.43
ATG4B-221ENST00000483778 RAB15P59190 212 aa17.72■□□□□ 0.43
ATG4B-221ENST00000483778 SH3BP2P78314 561 aa17.72■□□□□ 0.43
ATG4B-221ENST00000483778 TMEM115Q12893 351 aaPredicted RBP17.72■□□□□ 0.43
ATG4B-221ENST00000483778 CHRNA6Q15825 494 aa17.72■□□□□ 0.43
ATG4B-221ENST00000483778 SLC14A2Q15849 920 aa17.72■□□□□ 0.43
ATG4B-221ENST00000483778 ATP1A1-AS1Q5TC04 95 aa17.72■□□□□ 0.43
ATG4B-221ENST00000483778 ABRAXAS1Q6UWZ7 409 aa17.72■□□□□ 0.43
ATG4B-221ENST00000483778 NLGN4XQ8N0W4 816 aa17.72■□□□□ 0.43
ATG4B-221ENST00000483778 ZNF567Q8N184 647 aa17.72■□□□□ 0.43
ATG4B-221ENST00000483778 NLGN4YQ8NFZ3 816 aaPredicted RBP17.72■□□□□ 0.43
ATG4B-221ENST00000483778 NAT14Q8WUY8 206 aa17.72■□□□□ 0.43
ATG4B-221ENST00000483778 TFB1MQ8WVM0 346 aaKnown RBP17.72■□□□□ 0.43
ATG4B-221ENST00000483778 RSC1A1Q92681 617 aa17.72■□□□□ 0.43
ATG4B-221ENST00000483778 HAUS1Q96CS2 278 aa17.72■□□□□ 0.43
ATG4B-221ENST00000483778 MRGPRX2Q96LB1 330 aa17.72■□□□□ 0.43
ATG4B-221ENST00000483778 TGM7Q96PF1 710 aa17.72■□□□□ 0.43
ATG4B-221ENST00000483778 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.72■□□□□ 0.43
ATG4B-221ENST00000483778 STN1Q9H668 368 aaKnown RBP17.72■□□□□ 0.43
ATG4B-221ENST00000483778 TMEM184BQ9Y519 407 aaPredicted RBP17.72■□□□□ 0.43
ATG4B-221ENST00000483778 MRPS18BQ9Y676 258 aaKnown RBP17.72■□□□□ 0.43
ATG4B-221ENST00000483778 HECTD1Q9ULT8 2610 aa17.72■□□□□ 0.43
ATG4B-221ENST00000483778 UBR5O95071 2799 aaPredicted RBP17.71■□□□□ 0.43
ATG4B-221ENST00000483778 PDZK1P1A8MUH7 402 aa17.71■□□□□ 0.43
ATG4B-221ENST00000483778 GAPDHSO14556 408 aaPredicted RBP17.71■□□□□ 0.43
ATG4B-221ENST00000483778 TERTO14746 1132 aaKnown RBP17.71■□□□□ 0.43
ATG4B-221ENST00000483778 VEGFDO43915 354 aa17.71■□□□□ 0.43
ATG4B-221ENST00000483778 UBXN7O94888 489 aa17.71■□□□□ 0.43
ATG4B-221ENST00000483778 VIPP01282 170 aa17.71■□□□□ 0.43
ATG4B-221ENST00000483778 PRKAR1AP10644 381 aa17.71■□□□□ 0.43
ATG4B-221ENST00000483778 SLC2A4P14672 509 aa17.71■□□□□ 0.43
ATG4B-221ENST00000483778 NR2C2P49116 596 aa17.71■□□□□ 0.43
ATG4B-221ENST00000483778 PPP1CAP62136 330 aa17.71■□□□□ 0.43
ATG4B-221ENST00000483778 KCNC4Q03721 635 aa17.71■□□□□ 0.43
ATG4B-221ENST00000483778 PDPK2PQ6A1A2 396 aa17.71■□□□□ 0.43
ATG4B-221ENST00000483778 BORAQ6PGQ7 559 aa17.71■□□□□ 0.43
ATG4B-221ENST00000483778 CEACAM20Q6UY09 585 aa17.71■□□□□ 0.43
ATG4B-221ENST00000483778 FAM83HQ6ZRV2 1179 aaPredicted RBP17.71■□□□□ 0.43
ATG4B-221ENST00000483778 PTRH1Q86Y79 214 aaKnown RBP17.71■□□□□ 0.43
ATG4B-221ENST00000483778 PLXDC1Q8IUK5 500 aa17.71■□□□□ 0.43
ATG4B-221ENST00000483778 RASGEF1AQ8N9B8 481 aa17.71■□□□□ 0.43
ATG4B-221ENST00000483778 SLC45A3Q96JT2 553 aa17.71■□□□□ 0.43
ATG4B-221ENST00000483778 GORASP1Q9BQQ3 440 aa17.71■□□□□ 0.43
ATG4B-221ENST00000483778 TIMM29Q9BSF4 260 aa17.71■□□□□ 0.43
ATG4B-221ENST00000483778 TSPY26PQ9H489 355 aa17.71■□□□□ 0.43
ATG4B-221ENST00000483778 CLMPQ9H6B4 373 aa17.71■□□□□ 0.43
ATG4B-221ENST00000483778 UCK1Q9HA47 277 aa17.71■□□□□ 0.43
ATG4B-221ENST00000483778 SLC40A1Q9NP59 571 aa17.71■□□□□ 0.43
ATG4B-221ENST00000483778 RAD18Q9NS91 495 aa17.71■□□□□ 0.43
ATG4B-221ENST00000483778 IL17CQ9P0M4 197 aa17.71■□□□□ 0.43
ATG4B-221ENST00000483778 FAM153AQ9UHL3 310 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms