RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 SPO11Q9Y5K1 396 aa13.26□□□□□ -0.29
CTDSP1-208ENST00000482272 LOC285095A0A1B0GVY8 99 aa13.25□□□□□ -0.29
CTDSP1-208ENST00000482272 PDZK1P1A8MUH7 402 aa13.25□□□□□ -0.29
CTDSP1-208ENST00000482272 F5H423 210 aaPredicted RBP13.25□□□□□ -0.29
CTDSP1-208ENST00000482272 KCNJ13O60928 360 aa13.25□□□□□ -0.29
CTDSP1-208ENST00000482272 AMD1P17707 334 aa13.25□□□□□ -0.29
CTDSP1-208ENST00000482272 VCLP18206 1134 aa13.25□□□□□ -0.29
CTDSP1-208ENST00000482272 WT1P19544 449 aaPredicted RBP13.25□□□□□ -0.29
CTDSP1-208ENST00000482272 NFKB1P19838 968 aa13.25□□□□□ -0.29
CTDSP1-208ENST00000482272 WNT3AP56704 352 aa13.25□□□□□ -0.29
CTDSP1-208ENST00000482272 KHDC1Q4VXA5 237 aaKnown RBP13.25□□□□□ -0.29
CTDSP1-208ENST00000482272 ANKS6Q68DC2 871 aa13.25□□□□□ -0.29
CTDSP1-208ENST00000482272 SARM1Q6SZW1 724 aa13.25□□□□□ -0.29
CTDSP1-208ENST00000482272 CCDC170Q8IYT3 715 aa13.25□□□□□ -0.29
CTDSP1-208ENST00000482272 KATNAL2Q8IYT4 538 aa13.25□□□□□ -0.29
CTDSP1-208ENST00000482272 CACNA2D3Q8IZS8 1091 aa13.25□□□□□ -0.29
CTDSP1-208ENST00000482272 BMPERQ8N8U9 685 aa13.25□□□□□ -0.29
CTDSP1-208ENST00000482272 EXD3Q8N9H8 876 aa13.25□□□□□ -0.29
CTDSP1-208ENST00000482272 DTX3LQ8TDB6 740 aa13.25□□□□□ -0.29
CTDSP1-208ENST00000482272 HTR3CQ8WXA8 447 aa13.25□□□□□ -0.29
CTDSP1-208ENST00000482272 KRT35Q92764 455 aa13.25□□□□□ -0.29
CTDSP1-208ENST00000482272 FCRL5Q96RD9 977 aa13.25□□□□□ -0.29
CTDSP1-208ENST00000482272 TIMM29Q9BSF4 260 aa13.25□□□□□ -0.29
CTDSP1-208ENST00000482272 TBC1D10AQ9BXI6 508 aa13.25□□□□□ -0.29
CTDSP1-208ENST00000482272 HACD3Q9P035 362 aa13.25□□□□□ -0.29
CTDSP1-208ENST00000482272 KLHL3Q9UH77 587 aa13.25□□□□□ -0.29
CTDSP1-208ENST00000482272 DNAJC16Q9Y2G8 782 aa13.25□□□□□ -0.29
CTDSP1-208ENST00000482272 PCDHA13Q9Y5I0 950 aa13.25□□□□□ -0.29
CTDSP1-208ENST00000482272 SDK2Q58EX2 2172 aa13.25□□□□□ -0.29
CTDSP1-208ENST00000482272 CFAP46Q8IYW2 2715 aa13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 hCG_1818297A0A087WSY0 165 aa13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 LILRA5A6NI73 299 aa13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 HACD1B0YJ81 288 aa13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 CAPN5O15484 640 aaPredicted RBP13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 RAD1O60671 282 aa13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 MTX2O75431 263 aa13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 LCA5LO95447 670 aa13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 MAP4P27816 1152 aaKnown RBP13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 CYLC1P35663 651 aaPredicted RBP13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 SLC19A1P41440 591 aa13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 UBE2IP63279 158 aaKnown RBP13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 MPP3Q13368 585 aa13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 TBR1Q16650 682 aa13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 PLA2G4EQ3MJ16 856 aa13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 ATP13A5Q4VNC0 1218 aa13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 KDELC1Q6UW63 502 aa13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 ABRAXAS1Q6UWZ7 409 aa13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 TMEM26Q6ZUK4 368 aa13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 RBM12BQ8IXT5 1001 aaKnown RBP13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 ZNF567Q8N184 647 aa13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 SLC25A41Q8N5S1 370 aa13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 HAUS1Q96CS2 278 aa13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 RTP4Q96DX8 246 aa13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 RBM41Q96IZ5 413 aaKnown RBP13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 MRGPRX2Q96LB1 330 aa13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 CTRCQ99895 268 aa13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 FERMT1Q9BQL6 677 aa13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 GORASP1Q9BQQ3 440 aa13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 EFHD1Q9BUP0 239 aa13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 FAM117AQ9C073 453 aa13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 C10orf88Q9H8K7 445 aa13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 SCHIP1Q9P0W5 487 aaPredicted RBP13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 SLC23A2Q9UGH3 650 aa13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 TRHDEQ9UKU6 1024 aa13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 HEMK1Q9Y5R4 338 aaPredicted RBP13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 ZNF106Q9H2Y7 1883 aaKnown RBP13.24□□□□□ -0.29
CTDSP1-208ENST00000482272 GCN1Q92616 2671 aaKnown RBP13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 POLR1CO15160 346 aaPredicted RBP13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 TOX3O15405 576 aaPredicted RBP13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 GPR39O43194 453 aa13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 PPFIA2O75334 1257 aa13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 UBXN7O94888 489 aa13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 HLA-DPA1P20036 260 aa13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 RPL10P27635 214 aaKnown RBP13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 SPAM1P38567 509 aa13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 HALP42357 657 aa13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 CHRNA4P43681 627 aa13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 CYP4F2P78329 520 aa13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 XRCC4Q13426 336 aa13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 ITGA9Q13797 1035 aa13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 SLC1A5Q15758 541 aa13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 SEPT7Q16181 437 aaKnown RBP13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 SIRPB2Q5JXA9 342 aa13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 CCDC181Q5TID7 509 aa13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 WASH2PQ6VEQ5 465 aa13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 DAAM2Q86T65 1068 aa13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 NLGN4XQ8N0W4 816 aa13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 NLGN4YQ8NFZ3 816 aaPredicted RBP13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 KIAA1143Q96AT1 154 aaPredicted RBP13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 CXorf40BQ96DE9 158 aa13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 OXNAD1Q96HP4 312 aaPredicted RBP13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 CALR3Q96L12 384 aaKnown RBP13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 SLC12A9Q9BXP2 914 aa13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 ZCCHC2Q9C0B9 1178 aaKnown RBP13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 TRIT1Q9H3H1 467 aaKnown RBP13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 WASH6PQ9NQA3 447 aa13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 POT1Q9NUX5 634 aa13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 IL17CQ9P0M4 197 aa13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 ZNF624Q9P2J8 865 aaPredicted RBP13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 RSPH14Q9UHP6 348 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms